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Lsi08G003870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G003870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBHLH domain-containing protein
Genome locationchr08:10669510..10673423
RNA-Seq ExpressionLsi08G003870
SyntenyLsi08G003870
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579208.1 Transcription factor BEE 3, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0794.44Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRKRENE DEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

XP_022939188.1 transcription factor BEE 3-like [Cucurbita moschata]1.0e-0794.44Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRKRENE DEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

XP_022994041.1 transcription factor BEE 3-like isoform X1 [Cucurbita maxima]1.4e-0794.44Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRKRENE DEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

XP_022994043.1 transcription factor BEE 3-like isoform X2 [Cucurbita maxima]1.4e-0794.44Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRKRENE DEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

XP_023551454.1 transcription factor BEE 1-like isoform X2 [Cucurbita pepo subsp. pepo]2.3e-0791.67Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRK +NEGDEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

TrEMBL top hitse value%identityAlignment
A0A2N9FPY7 BHLH domain-containing protein1.8e-0583.33Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        SL GRKR+R N+GD EKPK VIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

A0A453GAI2 Uncharacterized protein6.1e-0641Show/hide
Query:  GGRKRKRENEGD-EEKPKGVIHVRAKRGQATDSHS-----KKRENKPKAEILTRLGSRMLQGNQHKDDQIYNNGNGSYVGCDHKLHPISAESDRVSLHEA
        GGRK+ ++      E PK  IHVRA+RG+ATDSHS     +KRE++P  E      +R+ QG           G G +   DHKL  ++A + RVS+HEA
Subjt:  GGRKRKRENEGD-EEKPKGVIHVRAKRGQATDSHS-----KKRENKPKAEILTRLGSRMLQGNQHKDDQIYNNGNGSYVGCDHKLHPISAESDRVSLHEA

A0A6J1FKZ5 transcription factor BEE 3-like5.0e-0894.44Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRKRENE DEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

A0A6J1JY10 transcription factor BEE 3-like isoform X16.5e-0894.44Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRKRENE DEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

A0A6J1K416 transcription factor BEE 3-like isoform X26.5e-0894.44Show/hide
Query:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        S GGRKRKRENE DEEKPKGVIHVRAKRGQATDSHS
Subjt:  SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18400.1 BR enhanced expression 14.3e-0457.58Show/hide
Query:  GRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        G++ K++ E ++EK + V+HVRA+RGQATDSHS
Subjt:  GRKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.7e-0572.22Show/hide
Query:  RKRKRENE---GDE-EKPKGVIHVRAKRGQATDSHS
        RKR  E E   GDE +KPK V+HVRAKRGQATDSHS
Subjt:  RKRKRENE---GDE-EKPKGVIHVRAKRGQATDSHS

AT1G73830.1 BR enhanced expression 37.4e-0462.5Show/hide
Query:  RKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        R+ KR    +EEK + V+HVRA+RGQATDSHS
Subjt:  RKRKRENEGDEEKPKGVIHVRAKRGQATDSHS

AT1G73830.2 BR enhanced expression 37.4e-0462.5Show/hide
Query:  RKRKRENEGDEEKPKGVIHVRAKRGQATDSHS
        R+ KR    +EEK + V+HVRA+RGQATDSHS
Subjt:  RKRKRENEGDEEKPKGVIHVRAKRGQATDSHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTTGGGAGGAAGAAAGAGGAAAAGAGAAAATGAAGGGGATGAGGAGAAGCCAAAAGGAGTGATTCATGTGAGGGCAAAAAGAGGCCAAGCTACTGATAGTCACAGTAA
GAAGAGAGAAAATAAACCAAAGGCTGAGATTCTTACACGACTTGGTTCCAGGATGCTACAAGGTAATCAACACAAGGACGATCAAATCTACAACAATGGGAATGGCAGTT
ATGTTGGATGTGATCATAAATTACATCCAATCTCTGCAGAATCAGATAGAGTTTCTCTCCATGAAGCTTTCAGTTGCTAG
mRNA sequenceShow/hide mRNA sequence
AGCTTGGGAGGAAGAAAGAGGAAAAGAGAAAATGAAGGGGATGAGGAGAAGCCAAAAGGAGTGATTCATGTGAGGGCAAAAAGAGGCCAAGCTACTGATAGTCACAGTAA
GAAGAGAGAAAATAAACCAAAGGCTGAGATTCTTACACGACTTGGTTCCAGGATGCTACAAGGTAATCAACACAAGGACGATCAAATCTACAACAATGGGAATGGCAGTT
ATGTTGGATGTGATCATAAATTACATCCAATCTCTGCAGAATCAGATAGAGTTTCTCTCCATGAAGCTTTCAGTTGCTAGTCGCTACTATGACTTCAACAACAGCTCGGA
TACTAATGGCATTGAGATAATGCAGGGTTGAGAAAGTTTTGCAGGCAACGAATGAGTGTAATGATATGCAAGAGATGGAGAGGATTGTACTTAGAGAAGAAGGTTATGGA
GGGCCCTCTTACCACCACTCTAATTTCCCACCTATCTAATTTCAATACAAAATAATCTTTACTCTTCTTTCCAAACACATATAAGCTATTTATTCAACTTATAATGCTTT
AATTTGTTCCCATTAAAATACATTACTATATATAGGTGGGACATTAAAG
Protein sequenceShow/hide protein sequence
SLGGRKRKRENEGDEEKPKGVIHVRAKRGQATDSHSKKRENKPKAEILTRLGSRMLQGNQHKDDQIYNNGNGSYVGCDHKLHPISAESDRVSLHEAFSC