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Lsi08G004250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G004250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlyco_tran_28_C domain-containing protein
Genome locationchr08:11775951..11778023
RNA-Seq ExpressionLsi08G004250
SyntenyLsi08G004250
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016758 - transferase activity, transferring hexosyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038187.1 uncharacterized protein E6C27_scaffold270G00170 [Cucumis melo var. makuwa]3.1e-3992.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSL+WDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
XP_004139093.1 uncharacterized protein LOC101207480 isoform X1 [Cucumis sativus]2.4e-3992.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSL+WDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
XP_008443650.1 PREDICTED: uncharacterized protein LOC103487197 [Cucumis melo]3.1e-3992.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSL+WDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
XP_011660197.1 uncharacterized protein LOC101207480 isoform X2 [Cucumis sativus]2.4e-3992.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSL+WDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
XP_038880657.1 uncharacterized protein LOC120072284 isoform X2 [Benincasa hispida]1.6e-3892.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAP SSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSLIWDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
TrEMBL top hitse value%identityAlignment
A0A0A0LXZ4 Uncharacterized protein1.2e-3992.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSL+WDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
A0A1S3B823 uncharacterized protein LOC1034871971.5e-3992.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSL+WDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
A0A5D3CU98 Uncharacterized protein1.5e-3992.13Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        + GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQ NGKSL+WDMRKPI+AAL ATAEHLSGLLPLH A
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
A0A6J1H937 uncharacterized protein LOC1114616187.1e-3788.51Show/hide
Query:  GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        GTN P SSTLEVPIFWFIH+EPLLVDKHYQAKALSDMVIV QSE+SSWESHLQ NGKSLIWDMRKPI+AAL AT+EHLSGLLPLH A
Subjt:  GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
A0A6J1JJ89 uncharacterized protein LOC1114849427.1e-3788.51Show/hide
Query:  GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
        GTN P SSTLEVPIFWFIH+EPLLVDKHYQAKALSDMVIV QSE+SSWESHLQ NGKSLIWDMRKPI+AAL AT+EHLSGLLPLH A
Subjt:  GTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G58100.1 unknown protein8.8e-3267.82Show/hide
Query:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLH
        + G +A   STLE+PIFW I  +PLL+DKHYQAKALS+MV+VVQSE SSWESHLQ NG+SL+WD+R P++AA+ + AEHL+GLLPLH
Subjt:  IAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTGCAGGAACAAATGCTCCTCATAGTTCTACACTGGAAGTTCCAATATTTTGGTTCATTCATACAGAACCCTTATTAGTTGACAAACATTATCAGGCAAAGGC
ACTCTCCGACATGGTTATTGTAGTACAGTCGGAGATTTCATCCTGGGAAAGCCATTTGCAGTACAATGGGAAATCACTTATATGGGATATGAGGAAGCCAATTGAAGCTG
CTCTTTTTGCTACTGCAGAACATCTTTCCGGTCTGCTCCCTCTTCATCCTGCAGACAGGTACCATAGTGAAATCCTTTGGGTTGGAGTGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATTGCAGGAACAAATGCTCCTCATAGTTCTACACTGGAAGTTCCAATATTTTGGTTCATTCATACAGAACCCTTATTAGTTGACAAACATTATCAGGCAAAGGC
ACTCTCCGACATGGTTATTGTAGTACAGTCGGAGATTTCATCCTGGGAAAGCCATTTGCAGTACAATGGGAAATCACTTATATGGGATATGAGGAAGCCAATTGAAGCTG
CTCTTTTTGCTACTGCAGAACATCTTTCCGGTCTGCTCCCTCTTCATCCTGCAGACAGGTACCATAGTGAAATCCTTTGGGTTGGAGTGATGTAGGAATATTAGTAGATA
TTTGTTGTTACACTTCCAGGTGTATTCTGTAATTAGTTTGGTTCGTTTTAGAGGTTACGCTCTGTTGTTGATTAGGTAGGTATGAGCTGTGCGCCTCTTGCTCTAGTCCT
ATAAATAGGTTGTATCTTCCCATCAATGAAATCATTCTACATATTATTCAGTTTACTTTGTGTCTTCACCATGGAGTAACAATACGTTTTTCTTTTTATTTTTTTATTTT
TTTTCTCTAATTGGATTTTTTCCAATTTGCTGGTGTCTACTTTCTTTACCTTCTCGAAGTCCCCAATATTGTATCCTTTTAAATCTCTTAGTCAAACTCAATTACTTTCT
TTACCTTCTCGAAGTCCCCAATATTTGTGTACCGACCCCCACCAAATTTTGTTGGTGCCGACGAGCATGGTGAGCTTGGTGGTGTT
Protein sequenceShow/hide protein sequence
MDIAGTNAPHSSTLEVPIFWFIHTEPLLVDKHYQAKALSDMVIVVQSEISSWESHLQYNGKSLIWDMRKPIEAALFATAEHLSGLLPLHPADRYHSEILWVGVM