; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G004330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G004330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic
Genome locationchr08:11852289..11856152
RNA-Seq ExpressionLsi08G004330
SyntenyLsi08G004330
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]2.8e-14095.96Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELSLRPN-AQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR
        MAAQTML TSGVCVGHGV +KRELSLRPN  QFTRLFFNPLPS+SVSLP RGFTTLA+FKSRTK PPKKV KPKQKVEDG+FGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELSLRPN-AQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

XP_008466710.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Cucumis melo]2.4e-13995.22Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELSLRP-NAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR
        MAAQTML TSGVCVGHGV +KRELSLRP N QFTRLFFNPLP++SVSLPARGFT LA+FKSRTK PPKKV KPKQKVEDG+FGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELSLRP-NAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]9.7e-13389.09Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL
        MAAQTM+ +SGVC  HGV +KRE++     LRPNAQF+RLFFNPLPS+SVSLPARGF TLAIFKS+ KVP KKV KPK+KVEDG+FGTSGGIGFTKQNEL
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF
        FVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]8.2e-13288.73Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL
        MAAQTM+ +SGVC  HGV +KRE++     LRPNAQ +RLFFNPLPS+SVSLPARGF TLAIFKS+ KVP KKV KPK+KVEDG+FGTSGGIGFTKQNEL
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF
        FVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]1.4e-14295.94Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV
        MAAQTML TSGVCVGHGVGVKREL LRPNAQF+RLFFNPLPS+SVSLPARGFTTLA+FKSRTK PPKKV+KPKQKVEDG+FGTSGGIGFTKQNELFVGRV
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANE
        AMIGFAAS+LGEAITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK+FRSALGLKEGGPLFGFTKANE
Subjt:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein1.4e-14095.96Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELSLRPN-AQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR
        MAAQTML TSGVCVGHGV +KRELSLRPN  QFTRLFFNPLPS+SVSLP RGFTTLA+FKSRTK PPKKV KPKQKVEDG+FGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELSLRPN-AQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic1.2e-13995.22Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELSLRP-NAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR
        MAAQTML TSGVCVGHGV +KRELSLRP N QFTRLFFNPLP++SVSLPARGFT LA+FKSRTK PPKKV KPKQKVEDG+FGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELSLRP-NAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A5A7UZ08 Photosystem II 22 kDa protein1.2e-13995.22Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELSLRP-NAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR
        MAAQTML TSGVCVGHGV +KRELSLRP N QFTRLFFNPLP++SVSLPARGFT LA+FKSRTK PPKKV KPKQKVEDG+FGTSGGIGFTKQNELFVGR
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELSLRP-NAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGR

Query:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
        VAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN
Subjt:  VAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKAN

Query:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  ELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like4.7e-13389.09Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL
        MAAQTM+ +SGVC  HGV +KRE++     LRPNAQF+RLFFNPLPS+SVSLPARGF TLAIFKS+ KVP KKV KPK+KVEDG+FGTSGGIGFTKQNEL
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF
        FVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like4.0e-13288.73Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL
        MAAQTM+ +SGVC  HGV +KRE++     LRPNAQ +RLFFNPLPS+SVSLPARGF TLAIFKS+ KVP KKV KPK+KVEDG+FGTSGGIGFTKQNEL
Subjt:  MAAQTMLFTSGVCVGHGVGVKRELS-----LRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF
        FVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic1.1e-10775.36Show/hide
Query:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLP----SNSVSLPARGF--TTLAIFKSRTKVPPKKVAKP--KQKVEDGVFGTSGGIGFTKQNE
        AQTML T+   V           L+P    + LF   LP    S+S +  +  F  TT+A+FKS+ K PPKKVA P  KQKVEDG+FGTSGGIGFTKQNE
Subjt:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLP----SNSVSLPARGF--TTLAIFKSRTKVPPKKVAKP--KQKVEDGVFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGLE+AVIPPGKSF+SALGL EGGPLFG
Subjt:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q02060 Photosystem II 22 kDa protein, chloroplastic5.0e-10874.46Show/hide
Query:  MAAQTMLFTSGVCVGHGVGVKREL-------SLRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQN
        MA   +L   GV   + + +KR          ++P +  + LFF+PLPS+S S  +  F TLA+FKS+ K  PKKV KPK KVEDG+FGTSGGIGFTK+N
Subjt:  MAAQTMLFTSGVCVGHGVGVKREL-------SLRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF
        ELFVGRVAMIGFAAS+LGE ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGLE+AVIPPGK  RSALGLK  GPLF
Subjt:  ELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        GFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E+++
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic8.6e-10875.36Show/hide
Query:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLP----SNSVSLPARGF--TTLAIFKSRTKVPPKKVAKP--KQKVEDGVFGTSGGIGFTKQNE
        AQTML T+   V           L+P    + LF   LP    S++ +  +  F  TT+A+FKS+ K PPKKVA P  KQKVEDG+FGTSGGIGFTKQNE
Subjt:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLP----SNSVSLPARGF--TTLAIFKSRTKVPPKKVAKP--KQKVEDGVFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGLE+AVIPPGKSF+SALGL EGGPLFG
Subjt:  LFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic2.0e-10474.55Show/hide
Query:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNP-----LPSNSVSLPAR-GFTTLAIFKSRTKVPPKKVA-KPKQKVEDGVFGTSGGIGFTKQNEL
        AQTML T+   V   +  K  L  R   +    FF P      PS S S  +    TT+A+FKS+ K P KKV  KPK+KVEDG+FGTSGGIGFTKQNEL
Subjt:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNP-----LPSNSVSLPAR-GFTTLAIFKSRTKVPPKKVA-KPKQKVEDGVFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF
        FVGRVAMIGFAAS+LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGL++AVIPPGK F+SALGL EGGPLF F
Subjt:  FVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9XF91 Photosystem II 22 kDa protein, chloroplastic4.7e-10675.93Show/hide
Query:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPAR--GFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV
        AQTML TSGV  GH +  K  L+ +P      L  N    + V+LP+R   F  LA+FK +TK  PKKV KPK KVEDG+FGTSGGIGFTK NELFVGRV
Subjt:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPAR--GFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANE
        AMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE GPLFGFTKANE
Subjt:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        LFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein3.4e-10775.93Show/hide
Query:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPAR--GFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV
        AQTML TSGV  GH +  K  L+ +P      L  N    + V+LP+R   F  LA+FK +TK  PKKV KPK KVEDG+FGTSGGIGFTK NELFVGRV
Subjt:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPAR--GFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANE
        AMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE GPLFGFTKANE
Subjt:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        LFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

AT1G44575.2 Chlorophyll A-B binding family protein1.3e-6672.63Show/hide
Query:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPAR--GFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV
        AQTML TSGV  GH +  K  L+ +P      L  N    + V+LP+R   F  LA+FK +TK  PKKV KPK KVEDG+FGTSGGIGFTK NELFVGRV
Subjt:  AQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPAR--GFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGG
        AMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK+ RSALGLKE G
Subjt:  AMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGCTTTTCACTTCTGGTGTGTGCGTCGGCCATGGCGTGGGTGTTAAGAGAGAATTAAGCCTTAGACCTAACGCTCAATTTACTCGTCTCTTTTT
TAATCCTCTGCCTTCCAACTCTGTTTCTTTGCCGGCGCGTGGTTTCACGACTCTTGCTATCTTTAAATCCAGAACTAAAGTGCCGCCCAAGAAGGTTGCGAAGCCGAAGC
AGAAGGTTGAAGACGGAGTTTTTGGGACTTCTGGTGGCATTGGTTTTACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCTATGATCGGCTTTGCTGCATCTATATTG
GGAGAAGCGATCACCGGAAAGGGAATTCTGGCACAACTGAACTTGGAAACTGGAATTCCGATTTACGAGGCGGAGCCTCTTCTTCTCTTCTTCATCTTATTCACTCTTCT
CGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCAGAACCAGCCACCGGCTTGGAACGCGCCGTTATCCCTCCCGGAAAGAGCTTCAGATCGGCGC
TAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAGCTGTTCGTCGGGAGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTGATCGGAGAAATTATC
ACAGGAAAGGGAGCTTTGGCGCAGTTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAACGTTGTGTTCTTCTTCATTGCTGCTGTGAA
TCCTGGAACTGGTAAATTCGTTACGGATGAGGAAGATGATGAATGA
mRNA sequenceShow/hide mRNA sequence
AAAATTTAAAACAAAAAATAAAAAAATAAAAATAAACGATGAATCGGCAGTGGCCAAAAATGAACCAGTTGTTAAGGTTTAAGACAAAACCCAAAACAAAGGACTGTACT
CCAAAAAAACCAATCCACCAATTAACAATCACAGAAATTAAACGACGACGTGTCGTTCTATCCGCCGATCGTTAAACTCTCCCACCAAATCCACACGCAGATCCTCTTCC
CTTCCCTTCCACCATACACTTAAAATCCCTTTCTTCTTCATCTTAAAAACTCATCCAGATTAAAACACTTCCCACTTGCTTAAGCTTTTTTTTAGCAAAAAAGCTTACAG
CATTTTCATTTCAATTTCAATGGCGGCTCAAACCATGCTTTTCACTTCTGGTGTGTGCGTCGGCCATGGCGTGGGTGTTAAGAGAGAATTAAGCCTTAGACCTAACGCTC
AATTTACTCGTCTCTTTTTTAATCCTCTGCCTTCCAACTCTGTTTCTTTGCCGGCGCGTGGTTTCACGACTCTTGCTATCTTTAAATCCAGAACTAAAGTGCCGCCCAAG
AAGGTTGCGAAGCCGAAGCAGAAGGTTGAAGACGGAGTTTTTGGGACTTCTGGTGGCATTGGTTTTACTAAGCAGAATGAACTCTTCGTCGGCCGTGTTGCTATGATCGG
CTTTGCTGCATCTATATTGGGAGAAGCGATCACCGGAAAGGGAATTCTGGCACAACTGAACTTGGAAACTGGAATTCCGATTTACGAGGCGGAGCCTCTTCTTCTCTTCT
TCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCAGAACCAGCCACCGGCTTGGAACGCGCCGTTATCCCTCCCGGA
AAGAGCTTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAGCTGTTCGTCGGGAGATTGGCGCAGCTAGGGTTTGCGTTCTC
GCTGATCGGAGAAATTATCACAGGAAAGGGAGCTTTGGCGCAGTTGAACATCGAGACGGGAGTGCCGATCAATGAGATTGAGCCTCTGGTTTTGTTGAACGTTGTGTTCT
TCTTCATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTTACGGATGAGGAAGATGATGAATGAAGAGATGGATTGTGGTTTAATTTTCTCTGTACATGAACTTAGCAA
ATCCGCATGTTCCTCCTCTTCAGGCTTGTGCTATTGTAACATGTTTATTCTGCTTGAGCACCCAAAACAACGAAAACAAATTAACAAACTTTGGGGAGTGAAGTTTAGGA
AACATAAGCCTTTTTGCTTCTTTAATCTCTTGTTACTTTTTTTCTATTTTCACCCCATTTTGAGTTTTTTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MAAQTMLFTSGVCVGHGVGVKRELSLRPNAQFTRLFFNPLPSNSVSLPARGFTTLAIFKSRTKVPPKKVAKPKQKVEDGVFGTSGGIGFTKQNELFVGRVAMIGFAASIL
GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEII
TGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE