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Lsi08G004740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G004740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionchalcone synthase-like
Genome locationchr08:12476053..12476560
RNA-Seq ExpressionLsi08G004740
SyntenyLsi08G004740
Gene Ontology termsGO:1901576 - organic substance biosynthetic process (biological process)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsIPR001099 - Chalcone/stilbene synthase, N-terminal
IPR011141 - Polyketide synthase, type III
IPR016039 - Thiolase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY41750.1 hypothetical protein CUMW_061860 [Citrus unshiu]9.8e-0956.25Show/hide
Query:  EKLED--NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV
        EK++D  N Q     ATIL IGTA PPNC YQ  YPD+YF VTNS HMT  K+KF+   +K  V
Subjt:  EKLED--NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV

OMO73324.1 hypothetical protein COLO4_27162 [Corchorus olitorius]3.4e-0963.27Show/hide
Query:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE
        + ++ Q  ATIL IGTA PPNCF Q++YPDFYF +TNSQHMT  K+KF+
Subjt:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE

QKK82622.1 chalcone synthase [Zanthoxylum armatum]7.5e-0953.23Show/hide
Query:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV
        EK++  + + +  ATIL IGTA PPNC YQ  YPD+YF VTNS+HMT  K KF+   +K  V
Subjt:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV

XP_022141572.1 chalcone synthase-like [Momordica charantia]5.7e-0956.45Show/hide
Query:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV
        EK E NN     RATILGIGTAVPPNC YQ Q+PD YF +TN+QH T  K+K +   +K  +
Subjt:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV

XP_038700257.1 chalcone synthase-like [Tripterygium wilfordii]9.8e-0963.27Show/hide
Query:  QSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKK
        Q  A+IL IGTA PPNCFYQ  YPDFYFG+T S+HMT  K KF+   +K
Subjt:  QSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKK

TrEMBL top hitse value%identityAlignment
A0A1R3HSU5 Uncharacterized protein1.6e-0963.27Show/hide
Query:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE
        + ++ Q  ATIL IGTA PPNCF Q++YPDFYF +TNSQHMT  K+KF+
Subjt:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE

A0A345AM78 Chalcone synthase 34.7e-0956.25Show/hide
Query:  EKLED--NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV
        EK++D  N Q     ATIL IGTA PPNC YQ  YPD+YF VTNS HMT  K+KF+   +K  V
Subjt:  EKLED--NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV

A0A6J1CK67 chalcone synthase-like2.8e-0956.45Show/hide
Query:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV
        EK E NN     RATILGIGTAVPPNC YQ Q+PD YF +TN+QH T  K+K +   +K  +
Subjt:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV

A0A6M9BQ82 Chalcone synthase3.6e-0953.23Show/hide
Query:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV
        EK++  + + +  ATIL IGTA PPNC YQ  YPD+YF VTNS+HMT  K KF+   +K  V
Subjt:  EKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGV

X4QGY0 Chalcone synthase4.7e-0958Show/hide
Query:  ATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGVT
        AT+L IGTA PPNCF Q++YP+FYF +TNS HMT  K KF+    K G++
Subjt:  ATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGVT

SwissProt top hitse value%identityAlignment
P16107 Chalcone synthase3.2e-1055.56Show/hide
Query:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKK
        N Q  Q  A IL IGTA P NC YQ  YPD+YF +TNS+HMT  K KF+   +K
Subjt:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKK

P19168 Chalcone synthase 34.1e-1055.1Show/hide
Query:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE
        N Q  +  AT++ IGTA PPNC  Q+ YPD+YF +TNS+HMT  K KF+
Subjt:  NNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE

P51089 Chalcone synthase5.4e-1059.57Show/hide
Query:  QSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE
        Q  +  ATIL IGTA PPNC  Q+ YPD+YF +TNS+HMT  K KF+
Subjt:  QSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE

P51090 Chalcone synthase4.1e-1053.85Show/hide
Query:  QSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKK
        Q  +  AT+L IGTA P NC YQ  YPD+YF +TNS+HMT  K KF+   +K
Subjt:  QSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKK

Q9XJ58 Chalcone synthase 15.4e-1059.57Show/hide
Query:  QSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE
        Q  Q  ATI+ IGTA PPNC  Q+ YPD+YF +TNS+HMT  K KF+
Subjt:  QSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE

Arabidopsis top hitse value%identityAlignment
AT5G13930.1 Chalcone and stilbene synthase family protein1.5e-0758.54Show/hide
Query:  ATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE
        A IL IGTA P N   Q +YPD+YF +TNS+HMT  K KF+
Subjt:  ATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATTAAAATGTCTTCTGAGATGTTTGAGAAACTTGAAGACAATAATCAGAGCCATCAAAGCAGAGCCACCATATTGGGGATTGGGACTGCTGTTCCTCCCAATTG
TTTCTACCAAAACCAATATCCTGATTTCTATTTTGGAGTCACCAATAGCCAACACATGACACACTCAAAACGCAAGTTCGAACTGAGTTCGAAGAAGATAGGTGTAACTC
TTATTACACCCACATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATTAAAATGTCTTCTGAGATGTTTGAGAAACTTGAAGACAATAATCAGAGCCATCAAAGCAGAGCCACCATATTGGGGATTGGGACTGCTGTTCCTCCCAATTG
TTTCTACCAAAACCAATATCCTGATTTCTATTTTGGAGTCACCAATAGCCAACACATGACACACTCAAAACGCAAGTTCGAACTGAGTTCGAAGAAGATAGGTGTAACTC
TTATTACACCCACATATTGA
Protein sequenceShow/hide protein sequence
MVIKMSSEMFEKLEDNNQSHQSRATILGIGTAVPPNCFYQNQYPDFYFGVTNSQHMTHSKRKFELSSKKIGVTLITPTY