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Lsi08G004770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G004770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:12583980..12584234
RNA-Seq ExpressionLsi08G004770
SyntenyLsi08G004770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647260.1 hypothetical protein Csa_018328, partial [Cucumis sativus]3.9e-1664.63Show/hide
Query:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI-ERPPP
        MH  +L   N VSDLPP+KPV     AA   P I  RVGG K+KSVIPK+RKLVKTMIYH +KDFLISLFRPS +I  RP P
Subjt:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI-ERPPP

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1061.67Show/hide
Query:  PAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPPPTH
        P  A  +  ++GYR G GK+KSVIPKKRKLVKTM+YHCIK+F+ SLFR      RPP TH
Subjt:  PAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPPPTH

KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1063.79Show/hide
Query:  PAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPPP
        P  A  +  ++ YR G GK+KSVIPKKRKLVKTM+YHCIKDFL SLFRP P+  R  P
Subjt:  PAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPPP

TYK18680.1 hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa]4.7e-0953.95Show/hide
Query:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI
        M FRV S          N PV+   A     PAI YR G G MKSVIPKKRKLVK M+Y CIK+++ SLFRP+PE+
Subjt:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI

XP_022141661.1 uncharacterized protein LOC111011963 [Momordica charantia]7.7e-1256.1Show/hide
Query:  RVLSDVNPVSD---LPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPE-IERPPP
        RVL    P++D   L PN PV++   A     AIG R  GGK+KSVIPK+R LVKTMIY+ IKDF+ISLFRP P  +  PPP
Subjt:  RVLSDVNPVSD---LPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPE-IERPPP

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein1.9e-1664.63Show/hide
Query:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI-ERPPP
        MH  +L   N VSDLPP+KPV     AA   P I  RVGG K+KSVIPK+RKLVKTMIYH +KDFLISLFRPS +I  RP P
Subjt:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI-ERPPP

A0A0A0KFQ1 Uncharacterized protein1.7e-0443.42Show/hide
Query:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI
        M FRV S  N V          +PA +       G   G G +KSVIPKKR+LVK M+Y CIK+++ SLF P+P++
Subjt:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI

A0A0A0KH01 Uncharacterized protein4.4e-0551.67Show/hide
Query:  VLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPP
        V V A+  + + A+GY+ GG KMKSVIP KRKLVK M+Y  IK+F+IS F       R P
Subjt:  VLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPP

A0A5D3D590 Uncharacterized protein2.3e-0953.95Show/hide
Query:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI
        M FRV S          N PV+   A     PAI YR G G MKSVIPKKRKLVK M+Y CIK+++ SLFRP+PE+
Subjt:  MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEI

A0A6J1CJW3 uncharacterized protein LOC1110119633.7e-1256.1Show/hide
Query:  RVLSDVNPVSD---LPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPE-IERPPP
        RVL    P++D   L PN PV++   A     AIG R  GGK+KSVIPK+R LVKTMIY+ IKDF+ISLFRP P  +  PPP
Subjt:  RVLSDVNPVSD---LPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPE-IERPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCAGAGTGTTGTCGGACGTCAATCCGGTCTCCGATCTTCCTCCAAACAAGCCGGTGCTGGTGCCGGCGGCGGCGGCGTTGAACAGGCCGGCGATTGGGTACAG
AGTGGGCGGTGGAAAAATGAAATCTGTGATTCCGAAGAAGAGGAAGCTAGTGAAGACGATGATTTACCACTGTATTAAGGACTTCCTTATATCGCTCTTTCGTCCGTCGC
CGGAGATCGAACGACCGCCGCCAACCCATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTCAGAGTGTTGTCGGACGTCAATCCGGTCTCCGATCTTCCTCCAAACAAGCCGGTGCTGGTGCCGGCGGCGGCGGCGTTGAACAGGCCGGCGATTGGGTACAG
AGTGGGCGGTGGAAAAATGAAATCTGTGATTCCGAAGAAGAGGAAGCTAGTGAAGACGATGATTTACCACTGTATTAAGGACTTCCTTATATCGCTCTTTCGTCCGTCGC
CGGAGATCGAACGACCGCCGCCAACCCATTTCTGA
Protein sequenceShow/hide protein sequence
MHFRVLSDVNPVSDLPPNKPVLVPAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPPPTHF