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Lsi08G004790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G004790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4218 domain-containing protein
Genome locationchr08:12627082..12635211
RNA-Seq ExpressionLsi08G004790
SyntenyLsi08G004790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032748.1 hypothetical protein E6C27_scaffold853G00910 [Cucumis melo var. makuwa]4.4e-1961.63Show/hide
Query:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE
        ++D++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSPA+ARKH  K+VA         ID  E+TL V LKQ+ R  L FHS IE
Subjt:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE

KAE8651942.1 hypothetical protein Csa_006405 [Cucumis sativus]7.6e-1978.95Show/hide
Query:  DLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLC
        +LD+P+VQDYLDHEMSVL+RDF CSLHK+YK+ DSP EARKHCDK+VA+DSDWA LC
Subjt:  DLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLC

TYJ98779.1 hypothetical protein E5676_scaffold156G00880 [Cucumis melo var. makuwa]4.4e-1961.63Show/hide
Query:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE
        ++D++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSPA+ARKH  K+VA         ID  E+TL V LKQ+ R  L FHS IE
Subjt:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE

XP_022156301.1 uncharacterized protein LOC111023227 [Momordica charantia]6.2e-0555.56Show/hide
Query:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSD
        +++L++P+V  YL+HEMS  H DFR  LHK Y QY SP EAR H  K VAR  D
Subjt:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSD

TrEMBL top hitse value%identityAlignment
A0A0A0LM17 Uncharacterized protein5.7e-2077.97Show/hide
Query:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLC
        ++DLD+P+VQDYLDHEMSVL+RDF CSLHK+YK+ DSP EARKHCDK+VA+DSDWA LC
Subjt:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLC

A0A5A7SQC8 DUF4218 domain-containing protein2.1e-1961.63Show/hide
Query:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE
        ++D++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSPA+ARKH  K+VA         ID  E+TL V LKQ+ R  L FHS IE
Subjt:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE

A0A5D3BIG6 DUF4218 domain-containing protein2.1e-1961.63Show/hide
Query:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE
        ++D++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSPA+ARKH  K+VA         ID  E+TL V LKQ+ R  L FHS IE
Subjt:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIE

A0A6J1DUJ0 uncharacterized protein LOC1110232273.0e-0555.56Show/hide
Query:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSD
        +++L++P+V  YL+HEMS  H DFR  LHK Y QY SP EAR H  K VAR  D
Subjt:  MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGACTTGGATGAACCTGTGGTACAAGATTATCTTGATCATGAGATGAGTGTACTACACAGAGACTTTCGTTGTTCACTACACAAAACCTATAAACAGTACGACTC
TCCAGCTGAAGCACGAAAACACTGCGACAAACAAGTGGCACGAGATTCAGATTGGGCTCATTTATGTATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTGAAGCAAC
TACCAAGGCTCGGGCTGCTCTTCCATTCACTCATAGAGGTGGGACTGCGACATTTTTACGTCATAAGCGGAAAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGACTTGGATGAACCTGTGGTACAAGATTATCTTGATCATGAGATGAGTGTACTACACAGAGACTTTCGTTGTTCACTACACAAAACCTATAAACAGTACGACTC
TCCAGCTGAAGCACGAAAACACTGCGACAAACAAGTGGCACGAGATTCAGATTGGGCTCATTTATGTATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTGAAGCAAC
TACCAAGGCTCGGGCTGCTCTTCCATTCACTCATAGAGGTGGGACTGCGACATTTTTACGTCATAAGCGGAAAA
Protein sequenceShow/hide protein sequence
MVDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPAEARKHCDKQVARDSDWAHLCIDGKERTLSVFLKQLPRLGLLFHSLIEVGLRHFYVISGK