; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G005010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionATP synthase subunit alpha, chloroplastic
Genome locationchr08:12904593..12935236
RNA-Seq ExpressionLsi08G005010
SyntenyLsi08G005010
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR000793 - ATP synthase, alpha subunit, C-terminal
IPR038376 - ATP synthase, alpha subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM90571.1 ATP synthase CF1 alpha subunit [Lagenaria siceraria]3.7e-4297.96Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

QZL38578.1 CF1 subunit alpha [Citrullus naudinianus]3.7e-4297.96Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

YP_009325974.1 ATP synthase CF1 alpha subunit [Citrullus lanatus]3.7e-4297.96Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

YP_009456131.1 ATP synthase CF1 alpha subunit [Lagenaria siceraria]1.3e-4298.98Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

YP_009752905.1 CF1 subunit alpha [Momordica sessilifolia]3.7e-4297.96Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

TrEMBL top hitse value%identityAlignment
A0A1P8LD69 ATP synthase subunit alpha1.8e-4297.96Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

A0A1P8LFL2 ATP synthase subunit alpha1.8e-4297.96Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

A0A7G9IT22 ATP synthase subunit alpha, chloroplastic6.2e-4398.98Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

X2F439 ATP synthase subunit alpha, chloroplastic6.2e-4398.98Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

X2F6V2 ATP synthase subunit alpha, chloroplastic1.8e-4297.96Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

SwissProt top hitse value%identityAlignment
P00823 ATP synthase subunit alpha, chloroplastic7.8e-4392.78Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLE+GQVRKFLVELRTY+KTNKPQFQEIISSTKTFT EAEALLKEAIQEQM+RF+LQ+Q
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ

Q2QDA3 ATP synthase subunit alpha, chloroplastic1.7e-4292.86Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTV++QIMT+YTGTNGYLDSLEI QVRKFLVELRTYVKTNKPQFQEIISSTKTFT EAE LLKEAIQEQMERFLLQDQ+
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

Q3C1H4 ATP synthase subunit alpha, chloroplastic7.8e-4392.78Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLE+GQVRKFLVELRTY+KTNKPQFQEIISSTKTFT EAEALLKEAIQEQM+RF+LQ+Q
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ

Q49L13 ATP synthase subunit alpha, chloroplastic7.8e-4394.85Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ
        QLARGQRLRELLKQSQ+APLTVE+QIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFT EAEALLKEAIQEQ ERFLLQ+Q
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ

Q8S8Y3 ATP synthase subunit alpha, chloroplastic1.0e-4292.78Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLDSLE+GQVRKFLVELRTY+KTNKPQFQEIISSTKTFT EAEALLKEAIQEQM+RF+LQ+Q
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQ

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein5.1e-0534.52Show/hide
Query:  LARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISS--TKTFTNEAEALLKE
        L RG RL E+ KQ Q APL +E QI+ IY   NG+ D + + ++ ++   +   V   KP+  + +    T     E +A LKE
Subjt:  LARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISS--TKTFTNEAEALLKE

ATCG00120.1 ATP synthase subunit alpha1.7e-4085.71Show/hide
Query:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL
        QLARGQRLRELLKQSQSAPLTVE+QIMTIYTGTNGYLD LEIGQVRKFLV+LRTY+KTNKPQFQEII+STKT T EAE+ LKE IQEQ+ERFLLQ+++
Subjt:  QLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQL

ATMG01190.1 ATP synthase subunit 15.1e-0534.52Show/hide
Query:  LARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISS--TKTFTNEAEALLKE
        L RG RL E+ KQ Q APL +E QI+ IY   NG+ D + + ++ ++   +   V   KP+  + +    T     E +A LKE
Subjt:  LARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISS--TKTFTNEAEALLKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCGCCGGCCGACGAACCCAAAGAGGCTCAAACAACTCAGAACTGCTTTTAACTTTTAACTTTTTGACTGAGGTGCCACCCTCCCAAGAACTCATCACCTTTAA
GAATCCCAGAGCTTTAAGGAGTAATAGAAACAAACCCCTCATTCTCCACATCAGTTTGCTTCAAAGGTTGTTCATTAGAGGATTAGTGGGACTTAAGGAGTTAGATGTAA
TTACAGAGGTAAAACGTATTATCAATATTGACAACACACATCACATGAAACTCAACAATGATCTCAATAGCCACATTATGATCAATCACAGTTCCAACAGAAGTAATAGT
CAAAACATCATACAACTCAGCATGATTAACAACATGGTTAACATGGTCAACACGATTCACAGACTCCATCATAGGACTATCAACATTATTAATAATTTGGTCACCACTCA
CAACCTTAGTTTCTTCAGTAACCACAACCAAATGTATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGACC
AGATAATGACTATTTATACCGGAACTAATGGTTATCTTGATTCATTAGAAATTGGACAAGTAAGGAAATTTCTCGTTGAGTTACGTACTTACGTAAAAACGAATAAACCT
CAGTTTCAAGAAATAATATCTTCCACGAAGACATTCACCAATGAAGCGGAAGCCCTTTTGAAAGAAGCTATTCAGGAACAGATGGAACGTTTTCTACTTCAAGACCAACT
GGTGAATAAACAATGCATAATGGCTGAAGTGTCATATCGGGTTCAGCCATTGGGCATAGGGTTCGTTCAGGAGCTTTTTCCATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCGCCGGCCGACGAACCCAAAGAGGCTCAAACAACTCAGAACTGCTTTTAACTTTTAACTTTTTGACTGAGGTGCCACCCTCCCAAGAACTCATCACCTTTAA
GAATCCCAGAGCTTTAAGGAGTAATAGAAACAAACCCCTCATTCTCCACATCAGTTTGCTTCAAAGGTTGTTCATTAGAGGATTAGTGGGACTTAAGGAGTTAGATGTAA
TTACAGAGGTAAAACGTATTATCAATATTGACAACACACATCACATGAAACTCAACAATGATCTCAATAGCCACATTATGATCAATCACAGTTCCAACAGAAGTAATAGT
CAAAACATCATACAACTCAGCATGATTAACAACATGGTTAACATGGTCAACACGATTCACAGACTCCATCATAGGACTATCAACATTATTAATAATTTGGTCACCACTCA
CAACCTTAGTTTCTTCAGTAACCACAACCAAATGTATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGACC
AGATAATGACTATTTATACCGGAACTAATGGTTATCTTGATTCATTAGAAATTGGACAAGTAAGGAAATTTCTCGTTGAGTTACGTACTTACGTAAAAACGAATAAACCT
CAGTTTCAAGAAATAATATCTTCCACGAAGACATTCACCAATGAAGCGGAAGCCCTTTTGAAAGAAGCTATTCAGGAACAGATGGAACGTTTTCTACTTCAAGACCAACT
GGTGAATAAACAATGCATAATGGCTGAAGTGTCATATCGGGTTCAGCCATTGGGCATAGGGTTCGTTCAGGAGCTTTTTCCATCTTAA
Protein sequenceShow/hide protein sequence
MTSAGRRTQRGSNNSELLLTFNFLTEVPPSQELITFKNPRALRSNRNKPLILHISLLQRLFIRGLVGLKELDVITEVKRIINIDNTHHMKLNNDLNSHIMINHSSNRSNS
QNIIQLSMINNMVNMVNTIHRLHHRTINIINNLVTTHNLSFFSNHNQMYQLARGQRLRELLKQSQSAPLTVEDQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKP
QFQEIISSTKTFTNEAEALLKEAIQEQMERFLLQDQLVNKQCIMAEVSYRVQPLGIGFVQELFPS