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Lsi08G005090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:13013646..13016499
RNA-Seq ExpressionLsi08G005090
SyntenyLsi08G005090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KCV9 Uncharacterized protein1.4e-0439.45Show/hide
Query:  NLYKAKIGIRLKARMDAFYVRDSAGNLVDLNTIKAICKRFRRMTKLDVAVVEKNASASAMLEIPNKDFFFADLVERSCFRVKECFSNDPKNGLCL-KTIS
        N  + +IGIR   +   F  ++S  N+VDLNT+KA CK  R  TKLDV + +K       L       FFAD              +DPK+GL L + I+
Subjt:  NLYKAKIGIRLKARMDAFYVRDSAGNLVDLNTIKAICKRFRRMTKLDVAVVEKNASASAMLEIPNKDFFFADLVERSCFRVKECFSNDPKNGLCL-KTIS

Query:  HQPADRNFR
        +QPADRN R
Subjt:  HQPADRNFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGAAATTAATGACAAACAACACCGATGCTGAAGATGACGAGAAAGGGGCTTGCACCAGCTCGGAGGACTTTGCAAGTGACCACCACCTTGATTGGAGGCTCCA
CCGTTTTTTTTTTTTTGTTGGGGGGAAATTGATTAGCCTCCACCTCTCAGGGCTGAAGTTCATTATTAATTCTTGTAAACACATGGAGTATTCTGTTGAAGTGTCCATTT
CAAAGATAGGGCAAAATGTTTCCTGTCGTGATTTTACAGTTAAGAGATATGTGACTTATTTCCTAATGAACAATTTACTTTTTGAGATTGGCTTTCAAGAGTTTGGCTTC
TTTCCTCCAGTTTCTTTTTTTAAACCAAAGAAGAAAAAAATATGTCCACAGATGATAGCTTTTATTTACTCAACTCATATGGTTGACTTGAATTGCATCTTCAGGCGCAT
TTCAAATGATGATCGAATGACTTCAGGCTGGCAATTTGATGAAGAAAACCATTTTCTTCAGTTCATTAACCATGTTGGTATCTATCATACTCGAAAGCTTATTTTATTAG
GTTTAAAAGGGTTCCAATCCTCCTCACTTCTTAGTAATCTTTACAAGGCAAAAATTGGCATAAGATTAAAAGCAAGGATGGATGCCTTCTATGTCAGGGATTCTGCCGGC
AATCTGGTGGATTTGAATACAATCAAAGCAATCTGTAAGAGATTCAGACGTATGACGAAGCTCGATGTTGCGGTCGTGGAGAAGAATGCTTCAGCTTCAGCAATGCTGGA
GATACCCAACAAAGACTTCTTCTTTGCCGACTTGGTGGAAAGGAGTTGCTTCAGAGTCAAGGAATGTTTCTCAAACGATCCCAAGAATGGATTATGTCTGAAAACAATAT
CACATCAACCTGCTGATCGTAATTTCAGAAAGTCCAACACTTACAGCCGCCCCAAATTAACTTGGCCTAATCTAGCAGAGGCCATAATACTTGAGCCACGCAGTATTTCT
TTAATGAGCAAATCGGACAAAAGTCAAGTTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGAAATTAATGACAAACAACACCGATGCTGAAGATGACGAGAAAGGGGCTTGCACCAGCTCGGAGGACTTTGCAAGTGACCACCACCTTGATTGGAGGCTCCA
CCGTTTTTTTTTTTTTGTTGGGGGGAAATTGATTAGCCTCCACCTCTCAGGGCTGAAGTTCATTATTAATTCTTGTAAACACATGGAGTATTCTGTTGAAGTGTCCATTT
CAAAGATAGGGCAAAATGTTTCCTGTCGTGATTTTACAGTTAAGAGATATGTGACTTATTTCCTAATGAACAATTTACTTTTTGAGATTGGCTTTCAAGAGTTTGGCTTC
TTTCCTCCAGTTTCTTTTTTTAAACCAAAGAAGAAAAAAATATGTCCACAGATGATAGCTTTTATTTACTCAACTCATATGGTTGACTTGAATTGCATCTTCAGGCGCAT
TTCAAATGATGATCGAATGACTTCAGGCTGGCAATTTGATGAAGAAAACCATTTTCTTCAGTTCATTAACCATGTTGGTATCTATCATACTCGAAAGCTTATTTTATTAG
GTTTAAAAGGGTTCCAATCCTCCTCACTTCTTAGTAATCTTTACAAGGCAAAAATTGGCATAAGATTAAAAGCAAGGATGGATGCCTTCTATGTCAGGGATTCTGCCGGC
AATCTGGTGGATTTGAATACAATCAAAGCAATCTGTAAGAGATTCAGACGTATGACGAAGCTCGATGTTGCGGTCGTGGAGAAGAATGCTTCAGCTTCAGCAATGCTGGA
GATACCCAACAAAGACTTCTTCTTTGCCGACTTGGTGGAAAGGAGTTGCTTCAGAGTCAAGGAATGTTTCTCAAACGATCCCAAGAATGGATTATGTCTGAAAACAATAT
CACATCAACCTGCTGATCGTAATTTCAGAAAGTCCAACACTTACAGCCGCCCCAAATTAACTTGGCCTAATCTAGCAGAGGCCATAATACTTGAGCCACGCAGTATTTCT
TTAATGAGCAAATCGGACAAAAGTCAAGTTTATTGA
Protein sequenceShow/hide protein sequence
MSKKLMTNNTDAEDDEKGACTSSEDFASDHHLDWRLHRFFFFVGGKLISLHLSGLKFIINSCKHMEYSVEVSISKIGQNVSCRDFTVKRYVTYFLMNNLLFEIGFQEFGF
FPPVSFFKPKKKKICPQMIAFIYSTHMVDLNCIFRRISNDDRMTSGWQFDEENHFLQFINHVGIYHTRKLILLGLKGFQSSSLLSNLYKAKIGIRLKARMDAFYVRDSAG
NLVDLNTIKAICKRFRRMTKLDVAVVEKNASASAMLEIPNKDFFFADLVERSCFRVKECFSNDPKNGLCLKTISHQPADRNFRKSNTYSRPKLTWPNLAEAIILEPRSIS
LMSKSDKSQVY