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Lsi08G005160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:13104018..13104666
RNA-Seq ExpressionLsi08G005160
SyntenyLsi08G005160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647188.1 hypothetical protein Csa_019045, partial [Cucumis sativus]2.8e-1774.39Show/hide
Query:  SNNNGPSRLERSLSLTSEPRTLKQYEMAIASMQAMEKQRLAGGTINGNAQSVITAATTTTGGGKKGKGDREEGATGGAAAVK
        SNNNGPSRLERSLSLTSEPRTL+QYEMAIASMQAMEKQRLAG     N   + T   TTT GG KGK D EEGA+GGAA  K
Subjt:  SNNNGPSRLERSLSLTSEPRTLKQYEMAIASMQAMEKQRLAGGTINGNAQSVITAATTTTGGGKKGKGDREEGATGGAAAVK
KAG6578921.1 hypothetical protein SDJN03_23369, partial [Cucurbita argyrosperma subsp. sororia]6.1e-0446.25Show/hide
Query:  PSRLERSLSLTSEPRTLKQYEMAIASMQAMEKQRLAGGTINGNAQSVITAATTTTGGGKKGKGDREEGATGGAAAVKLPA
        PS+L+RSLS  SEPR  +QY+MAIASMQAMEKQ  AG                   G   G+ DRE G  G +  V  PA
Subjt:  PSRLERSLSLTSEPRTLKQYEMAIASMQAMEKQRLAGGTINGNAQSVITAATTTTGGGKKGKGDREEGATGGAAAVKLPA
XP_031743959.1 mini-chromosome maintenance complex-binding protein-like [Cucumis sativus]2.8e-1774.39Show/hide
Query:  SNNNGPSRLERSLSLTSEPRTLKQYEMAIASMQAMEKQRLAGGTINGNAQSVITAATTTTGGGKKGKGDREEGATGGAAAVK
        SNNNGPSRLERSLSLTSEPRTL+QYEMAIASMQAMEKQRLAG     N   + T   TTT GG KGK D EEGA+GGAA  K
Subjt:  SNNNGPSRLERSLSLTSEPRTLKQYEMAIASMQAMEKQRLAGGTINGNAQSVITAATTTTGGGKKGKGDREEGATGGAAAVK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAACAACAATGGTCCTTCTAGGCTTGAAAGATCCCTCTCCTTGACCTCCGAGCCTAGGACTCTTAAACAATATGAAATGGCAATCGCATCCATGCAAGCCAT
GGAGAAACAGCGCCTTGCCGGAGGAACCATTAATGGTAATGCACAGAGTGTTATTACTGCTGCTACTACTACTACTGGAGGGGGGAAGAAGGGAAAAGGTGATCGGGAAG
AAGGGGCGACGGGTGGTGCAGCGGCGGTGAAGCTTCCGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCAACAACAATGGTCCTTCTAGGCTTGAAAGATCCCTCTCCTTGACCTCCGAGCCTAGGACTCTTAAACAATATGAAATGGCAATCGCATCCATGCAAGCCAT
GGAGAAACAGCGCCTTGCCGGAGGAACCATTAATGGTAATGCACAGAGTGTTATTACTGCTGCTACTACTACTACTGGAGGGGGGAAGAAGGGAAAAGGTGATCGGGAAG
AAGGGGCGACGGGTGGTGCAGCGGCGGTGAAGCTTCCGGCGTGA
Protein sequenceShow/hide protein sequence
MGSNNNGPSRLERSLSLTSEPRTLKQYEMAIASMQAMEKQRLAGGTINGNAQSVITAATTTTGGGKKGKGDREEGATGGAAAVKLPA