; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G005230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF150 domain-containing protein
Genome locationchr08:13180314..13183390
RNA-Seq ExpressionLsi08G005230
SyntenyLsi08G005230
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR003728 - Ribosome maturation factor RimP
IPR028989 - Ribosome maturation factor RimP, N-terminal
IPR035956 - RimP, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441558.1 PREDICTED: uncharacterized protein LOC103485652 isoform X1 [Cucumis melo]3.0e-15286.85Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+SES+PVLK NIV+EVS+DEEDDVL+DE EE         G
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
        HVLD +DEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSDC
        PLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSDC

XP_008441560.1 PREDICTED: uncharacterized protein LOC103485652 isoform X2 [Cucumis melo]9.9e-14885.32Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+SES+PVLK NIV+EVS+DEEDDVL+DE EE          
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSDC
        PLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSDC

XP_022993908.1 uncharacterized protein LOC111489765 isoform X1 [Cucurbita maxima]3.9e-14484.05Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M LIT  NFRLSAV  S ILP+SGFR S ISPRNLPFPFV HRF STSNNPLLLHARK++SESEPV+KRNIVEEVS+DEEDDVLLDEL+ED         
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIM+DDGEDYFEEE+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSF G+LKIYAFKTVSNSTV+VRIEKLSNKSGSP MEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDELDRFKER MYVKY N+VVT SSSSE+DGIFKLVSFDIE +CC WGLADV+INREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSD
        PLSKKQREWRLETPFDSLRLVRLYSD
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSD

XP_023550697.1 uncharacterized protein LOC111808765 [Cucurbita pepo subsp. pepo]1.5e-14383.44Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M +IT RNFRLSAV  S ILP+SGFR S IS RNLPFPFV HRF STSNNPLLLHARK++SESEPV+KRNIVEEVS+DEEDD L DELE+          
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIM+DDGEDYFEEE+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSFHG+LKIYAFKTVSNSTV+VRIEKLSNKSGSP MEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDELDRFKER MYVKYTN+VVT SSSSE+DGIFKLVSFDIE +CC WGLADV+INREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSD
        PLSKKQREWRLETPFDSLRLVRLYSD
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSD

XP_038884405.1 uncharacterized protein LOC120075260 [Benincasa hispida]2.7e-15388.38Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M LIT RN RLSAVSTS+ILP SGFRWSSISPRNLPFPFVEHR  STSNNPLLLHARKR+SESEPVLKRNIVEEVS+DEEDDVLLDELEE          
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIMEDDGEDYFEE+YME NAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHG+LKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FST+YRARLDEAELAKSVPEN+SLEVSSPGVERVV+IPDELDRFKER MYVKYTN+V TASSSSE+DGIFKLVSFDIEAK CTWGLADVKINREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSDC
        PLSKKQR+WRLETPFDSLRLVRLYSDC
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSDC

TrEMBL top hitse value%identityAlignment
A0A1S3B3P3 uncharacterized protein LOC103485652 isoform X11.4e-15286.85Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+SES+PVLK NIV+EVS+DEEDDVL+DE EE         G
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
        HVLD +DEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSDC
        PLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSDC

A0A1S3B4D1 uncharacterized protein LOC103485652 isoform X24.8e-14885.32Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+SES+PVLK NIV+EVS+DEEDDVL+DE EE          
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSDC
        PLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSDC

A0A5A7UZ84 DUF150 domain-containing protein4.8e-14885.32Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M  ITA N  LSAVST   LP S FRWSSISP NLPFPF++HRF STSNN LLLHARKR+SES+PVLK NIV+EVS+DEEDDVL+DE EE          
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAG WWDK+ALAIAEEVILSFHG+LKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FST+YRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKER MYVKYTN+VVTASSSSE+DG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSDC
        PLSKKQREWRLETPFDSLRLVRLYSDC
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSDC

A0A6J1FH63 uncharacterized protein LOC111445430 isoform X29.3e-14483.44Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M +IT RNFRLSAV  S ILP+SGFR S ISPRNLPFPFV HRF STSNNPLLLHARK++SESEPV+KRNIVEEVS+DEEDD LLDELE+          
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIM+DDGEDYFEEE+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSF G+LKIYAFKTVSNSTV+VRIEKLSNKSGSP MEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDELDRFKER MYVKYTN+VVT SSSSE+DGIFKLVSF+IE +CC WGLADV+INREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSD
        PLSKKQREWRLETPFDSLRLVRLYSD
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSD

A0A6J1K3N1 uncharacterized protein LOC111489765 isoform X11.9e-14484.05Show/hide
Query:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG
        M LIT  NFRLSAV  S ILP+SGFR S ISPRNLPFPFV HRF STSNNPLLLHARK++SESEPV+KRNIVEEVS+DEEDDVLLDEL+ED         
Subjt:  MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTG

Query:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA
              DEIM+DDGEDYFEEE+MEDNAEVY GDGGEGGGISLAGTWWDKEALA+AEEVILSF G+LKIYAFKTVSNSTV+VRIEKLSNKSGSP MEDIEA
Subjt:  HVLDCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEA

Query:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR
        FS+ YRARLDEAEL+K+VPENISLEVSSPGVERVVRIPDELDRFKER MYVKY N+VVT SSSSE+DGIFKLVSFDIE +CC WGLADV+INREKAGKGR
Subjt:  FSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGR

Query:  PLSKKQREWRLETPFDSLRLVRLYSD
        PLSKKQREWRLETPFDSLRLVRLYSD
Subjt:  PLSKKQREWRLETPFDSLRLVRLYSD

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP8.2e-0433.8Show/hide
Query:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK
        +++ + + ++ L++K+GS S+ED E  S   +  LD+         + +L+VSS G ERV+R+P++L RF+
Subjt:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK

B0SQH2 Ribosome maturation factor RimP8.2e-0433.8Show/hide
Query:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK
        +++ + + ++ L++K+GS S+ED E  S   +  LD+         + +L+VSS G ERV+R+P++L RF+
Subjt:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFK

B8CW69 Ribosome maturation factor RimP8.2e-0433Show/hide
Query:  KTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFK
        K   N  +RV IE   N  G  +++  E  S +   +LDE +    + E+  LEVSSPG+ER ++  ++ DRF  +  Y+K        S + E  GI K
Subjt:  KTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFK

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00907.5e-4537.18Show/hide
Query:  STSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDG
        S+S++LP++  R +   PR  PF      FSS+S++P             P  +       + DEED           +++ K T  V     E++ED  
Subjt:  STSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDG

Query:  EDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAEL
        ED  E+E +E       GDGG+GGGI L G  W +  L+IA +V+     +L+++AFKT     + VR++KLS + G P+M+++E FS  ++ RLD+A  
Subjt:  EDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAEL

Query:  AKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETP
         K +PE+++LEVSSPG ER++R+P++L RFK+  M V Y     T S  +   G+F L S D E+  C W LADV+ NR+   KGRPLS+KQ++ R+  P
Subjt:  AKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETP

Query:  FDSLRLVRLYSD
        F   + + LY D
Subjt:  FDSLRLVRLYSD

AT1G69210.2 Uncharacterised protein family UPF00901.2e-1833.49Show/hide
Query:  STSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDG
        S+S++LP++  R +   PR  PF      FSS+S++P             P  +       + DEED           +++ K T  V     E++ED  
Subjt:  STSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIMEDDG

Query:  EDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAEL
        ED  E+E +E       GDGG+GGGI L G  W +  L+IA +V+     +L+++AFKT     + VR++KLS + G P+M+++E FS  ++ RLD+A  
Subjt:  EDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAEL

Query:  AKSVPENISLEV
         K +PE+++LEV
Subjt:  AKSVPENISLEV

AT1G77122.1 Uncharacterised protein family UPF00907.4e-8556.48Show/hide
Query:  LSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEV-------SQDEEDDVLLDELEEDWSWKSKLTGHVL
        L A S S +   + FR    S  +L F F    F  T N     HA++++  S    K N VEE+        ++EE+ VL +E++E+   + +L   +L
Subjt:  LSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEV-------SQDEEDDVLLDELEEDWSWKSKLTGHVL

Query:  DCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFST
        D  DE  EDD +D+   E+ E   E+Y GDGG GGGI LAGT WDK ALA+A +V  SF G+L IYAFKT+ NST++VRIE+L+NK GSP+MEDIEAFST
Subjt:  DCIDEIMEDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFST

Query:  SYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLS
         YRA+L EAELAKS+P+NISLEVSSPGVERVVRIP +LDR+K+R MYV+YTN      + +E DGIF+LVSFD+EAK C WG+AD+++NREKAGKGRPLS
Subjt:  SYRARLDEAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLS

Query:  KKQREWRLETPFDSLRLVRLYSDC
        KKQREWRLET F+SLRLVRL+S+C
Subjt:  KKQREWRLETPFDSLRLVRLYSDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGATTACGGCTCGTAATTTCAGACTCTCTGCGGTTTCCACTTCAATAATCCTTCCACGGAGTGGCTTCCGATGGTCTTCAATCTCCCCCAGAAATCTTCCCTT
CCCATTTGTCGAGCATCGATTTTCTTCTACGTCGAACAATCCCCTATTACTTCATGCCAGAAAGAGAGACTCAGAATCAGAGCCAGTTCTCAAACGAAACATCGTCGAGG
AAGTGTCGCAGGACGAAGAAGATGACGTCCTTCTCGACGAACTTGAAGAAGACTGGTCTTGGAAAAGTAAATTGACGGGACACGTTCTTGATTGCATAGATGAGATAATG
GAAGATGATGGCGAAGATTACTTTGAAGAAGAGTATATGGAGGATAATGCTGAAGTTTATGAAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGGTG
GGATAAAGAAGCACTGGCCATAGCTGAGGAGGTTATTCTTTCATTTCACGGTGAATTGAAGATTTATGCTTTCAAAACAGTCTCGAATTCCACTGTTCGAGTGCGGATTG
AAAAGCTTTCTAACAAATCGGGTTCCCCCAGTATGGAAGATATTGAGGCATTTTCTACATCATATCGAGCACGATTGGATGAGGCAGAGCTTGCTAAATCTGTGCCAGAG
AACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGGATTCCTGACGAGCTGGATCGGTTCAAAGAGAGGACAATGTATGTGAAATACACAAACAATGT
AGTTACAGCCAGTTCGTCCTCTGAGAATGATGGCATTTTCAAGCTTGTGTCATTCGACATAGAAGCAAAGTGCTGCACTTGGGGTTTAGCAGACGTGAAGATAAATCGAG
AGAAGGCGGGAAAAGGAAGACCTCTAAGCAAAAAGCAAAGAGAGTGGCGTTTAGAAACTCCTTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGA
mRNA sequenceShow/hide mRNA sequence
GCCATAGCAACACTGTGTTGTGACTCGTGAGCTTCATCATCCCCAACACTCTGTTCGGACGGTTTTGTTTCTTCTAACGCACATTAACGGATTTCAAGTCCCAAGAGCAG
GAATGTTCTTGATTACGGCTCGTAATTTCAGACTCTCTGCGGTTTCCACTTCAATAATCCTTCCACGGAGTGGCTTCCGATGGTCTTCAATCTCCCCCAGAAATCTTCCC
TTCCCATTTGTCGAGCATCGATTTTCTTCTACGTCGAACAATCCCCTATTACTTCATGCCAGAAAGAGAGACTCAGAATCAGAGCCAGTTCTCAAACGAAACATCGTCGA
GGAAGTGTCGCAGGACGAAGAAGATGACGTCCTTCTCGACGAACTTGAAGAAGACTGGTCTTGGAAAAGTAAATTGACGGGACACGTTCTTGATTGCATAGATGAGATAA
TGGAAGATGATGGCGAAGATTACTTTGAAGAAGAGTATATGGAGGATAATGCTGAAGTTTATGAAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGG
TGGGATAAAGAAGCACTGGCCATAGCTGAGGAGGTTATTCTTTCATTTCACGGTGAATTGAAGATTTATGCTTTCAAAACAGTCTCGAATTCCACTGTTCGAGTGCGGAT
TGAAAAGCTTTCTAACAAATCGGGTTCCCCCAGTATGGAAGATATTGAGGCATTTTCTACATCATATCGAGCACGATTGGATGAGGCAGAGCTTGCTAAATCTGTGCCAG
AGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGGATTCCTGACGAGCTGGATCGGTTCAAAGAGAGGACAATGTATGTGAAATACACAAACAAT
GTAGTTACAGCCAGTTCGTCCTCTGAGAATGATGGCATTTTCAAGCTTGTGTCATTCGACATAGAAGCAAAGTGCTGCACTTGGGGTTTAGCAGACGTGAAGATAAATCG
AGAGAAGGCGGGAAAAGGAAGACCTCTAAGCAAAAAGCAAAGAGAGTGGCGTTTAGAAACTCCTTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGATAAT
GCAATCAAATTTTGGTGGGAATTCAGCACCCCCTCAATCAAAGATGTATAGTAAATCCACATCTGTTGATTTTAAGATTGAAAATTTGTTGTTGATAAAACTTTAGAACA
AGAAAGAGTTCCCTTCGACTCAATTTTGGAAGTCATTGGCTCACGCTTGGTGATCAAGAAGTTTAGCTTGGTATAGGAGTTTTCGAACTT
Protein sequenceShow/hide protein sequence
MFLITARNFRLSAVSTSIILPRSGFRWSSISPRNLPFPFVEHRFSSTSNNPLLLHARKRDSESEPVLKRNIVEEVSQDEEDDVLLDELEEDWSWKSKLTGHVLDCIDEIM
EDDGEDYFEEEYMEDNAEVYEGDGGEGGGISLAGTWWDKEALAIAEEVILSFHGELKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKSVPE
NISLEVSSPGVERVVRIPDELDRFKERTMYVKYTNNVVTASSSSENDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC