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Lsi08G005270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpathogen-related protein-like isoform X2
Genome locationchr08:13214587..13215595
RNA-Seq ExpressionLsi08G005270
SyntenyLsi08G005270
Gene Ontology termsNA
InterPro domainsIPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF33484.1 putative pathogenesis-related protein [Cucumis sativus]9.0e-4559.3Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTFSLN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPFK+HAPTGE IEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGP LDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
XP_011657303.2 pathogen-related protein isoform X2 [Cucumis sativus]9.0e-4559.3Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTFSLN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPFK+HAPTGE IEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGP LDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
XP_016899458.1 PREDICTED: pathogen-related protein-like isoform X2 [Cucumis melo]6.9e-4558.72Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTF LN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPF++HA TGERIEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGPGLDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
XP_031743307.1 pathogen-related protein isoform X1 [Cucumis sativus]9.0e-4559.3Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTFSLN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPFK+HAPTGE IEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGP LDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
XP_038885265.1 pathogen-related protein-like isoform X1 [Benincasa hispida]1.4e-4559.88Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKISR+DFRT+D +KYTFSLN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGP LDG VEKAVSSCPVLR+TG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
TrEMBL top hitse value%identityAlignment
A0A0A0KF98 Uncharacterized protein4.4e-4559.3Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTFSLN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPFK+HAPTGE IEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGP LDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
A0A1S4DTY2 pathogen-related protein-like isoform X15.0e-4151.27Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTF LN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFK-------------------------VNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPF++HA TGERIEFYGVAIFK                         VNEKDKIEGVEFFFDPAEL+GKLLKGPGLDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFK-------------------------VNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
A0A1S4DU25 pathogen-related protein-like isoform X23.3e-4558.72Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTF LN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPF++HA TGERIEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGPGLDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
A0A5D3DJI2 Pathogen-related protein-like isoform X23.3e-4558.72Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTF LN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPF++HA TGERIEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGPGLDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
Q700J9 Putative pathogenesis-related protein4.4e-4559.3Show/hide
Query:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG
        MEMFHKIS SDF+TID NKYTFSLN                                                              GPPNIVFKFRHWG
Subjt:  MEMFHKISRSDFRTIDSNKYTFSLN--------------------------------------------------------------GPPNIVFKFRHWG

Query:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
        YMEGPFK+HAPTGE IEFYGVAIFKVNEKDKIEGVEFFFDPAEL+GKLLKGP LDGSVEKA+SSCPVLRNTG
Subjt:  YMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG
SwissProt top hitse value%identityAlignment
P16273 Pathogen-related protein5.2e-1948.84Show/hide
Query:  FSLNGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLR
        +S    P I FKFRHWGYMEGPFK H P G R+EF+GV +F V+E  K+E  EFF++    L   L  P    S     S CPV+R
Subjt:  FSLNGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLR
Arabidopsis top hitse value%identityAlignment
AT1G78780.1 pathogenesis-related family protein7.4e-2150.56Show/hide
Query:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP
        +GPP I FKFRHWGY EG FK HAPTGE ++F G+ + KV+E  + E +E ++DP EL G LLKGP +         D + EK   SCP
Subjt:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP
AT1G78780.2 pathogenesis-related family protein7.4e-2150.56Show/hide
Query:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP
        +GPP I FKFRHWGY EG FK HAPTGE ++F G+ + KV+E  + E +E ++DP EL G LLKGP +         D + EK   SCP
Subjt:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP
AT1G78780.3 pathogenesis-related family protein7.4e-2150.56Show/hide
Query:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP
        +GPP I FKFRHWGY EG FK HAPTGE ++F G+ + KV+E  + E +E ++DP EL G LLKGP +         D + EK   SCP
Subjt:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP
AT1G78780.4 pathogenesis-related family protein7.4e-2150.56Show/hide
Query:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP
        +GPP I FKFRHWGY EG FK HAPTGE ++F G+ + KV+E  + E +E ++DP EL G LLKGP +         D + EK   SCP
Subjt:  NGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGL---------DGSVEKAVSSCP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGTTCCATAAGATATCACGCAGTGACTTCAGAACAATTGATTCAAACAAGTATACTTTCAGTCTTAATGGCCCCCCAAATATTGTGTTCAAGTTCAGGCATTG
GGGCTACATGGAGGGGCCTTTCAAAAGCCATGCCCCCACTGGGGAGAGAATTGAATTCTATGGAGTTGCTATTTTTAAGGTGAATGAGAAAGATAAGATTGAGGGGGTGG
AGTTCTTTTTTGACCCAGCGGAATTGCTTGGAAAACTTCTGAAAGGTCCTGGCTTGGATGGCTCGGTTGAAAAGGCGGTTTCGAGCTGTCCTGTCTTGAGAAACACAGGG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGTTCCATAAGATATCACGCAGTGACTTCAGAACAATTGATTCAAACAAGTATACTTTCAGTCTTAATGGCCCCCCAAATATTGTGTTCAAGTTCAGGCATTG
GGGCTACATGGAGGGGCCTTTCAAAAGCCATGCCCCCACTGGGGAGAGAATTGAATTCTATGGAGTTGCTATTTTTAAGGTGAATGAGAAAGATAAGATTGAGGGGGTGG
AGTTCTTTTTTGACCCAGCGGAATTGCTTGGAAAACTTCTGAAAGGTCCTGGCTTGGATGGCTCGGTTGAAAAGGCGGTTTCGAGCTGTCCTGTCTTGAGAAACACAGGG
TAG
Protein sequenceShow/hide protein sequence
MEMFHKISRSDFRTIDSNKYTFSLNGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPGLDGSVEKAVSSCPVLRNTG