; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G005360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein 2
Genome locationchr08:13329603..13335050
RNA-Seq ExpressionLsi08G005360
SyntenyLsi08G005360
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441534.1 PREDICTED: RNA-binding protein 2 [Cucumis melo]2.7e-9292.9Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPRT+YE P+SGLSTGH+MHNYLASDD GGPRSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        +RMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA I   F+G
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

XP_031743537.1 RNA-binding protein 2 isoform X3 [Cucumis sativus]1.3e-9191.8Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPRT+YE P+SGLSTGH+MHNYL SDD GGPRSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        +RMPGPLLPDPIVMSRPPAVSPDLAPNGRN+EYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA I   F+G
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

XP_038884975.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]1.9e-9395.56Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPG+LKRPRTEYE PSSGL +GHEMHNYLASDD GG RSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
        SRMPGPLLPDPIVMSRPPAVSPD+APNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI

XP_038884977.1 RNA-binding protein 2-like isoform X3 [Benincasa hispida]1.9e-9395.56Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPG+LKRPRTEYE PSSGL +GHEMHNYLASDD GG RSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
        SRMPGPLLPDPIVMSRPPAVSPD+APNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI

XP_038884978.1 RNA-binding protein 2-like isoform X4 [Benincasa hispida]1.9e-9395.56Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPG+LKRPRTEYE PSSGL +GHEMHNYLASDD GG RSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
        SRMPGPLLPDPIVMSRPPAVSPD+APNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARILFI

TrEMBL top hitse value%identityAlignment
A0A1S3B4F0 RNA-binding protein 21.3e-9292.9Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPRT+YE P+SGLSTGH+MHNYLASDD GGPRSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        +RMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA I   F+G
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

A0A6J1CKA2 RNA-binding protein 2-like1.5e-8888.52Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR +YE PSSGL TGHEMHNYL SDD GGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        SRMPGP +PDP+VMSRPPAVSPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVA I   F+G
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

A0A6J1E3U2 RNA-binding protein 2-like5.5e-8384.15Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR EYE PSSG   GH+MHN+LASDD  GP +VKDTQ IGSAYDRYLQSVQLSS  SGEVPT GEMGMGRP+ANR+PVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        SRMPGP +PDP+VMSRPPAVSPDL PNGRNIEYGNHLPV+SM+RPGRETVPLPPDASNTLYVEGLP DSSRREVA I   F+G
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

A0A6J1FDW9 RNA-binding protein 2-like isoform X29.4e-8384.7Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRTEYE PSSGL   HEMHNY+A+DD GGPR+VKDTQTIGSAYDRYLQSVQ SSF SGEVPTHGEMGMGRP+ANRMP+ 
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        +RMPGPLLPDP+VMSRP AVSPDLA NGRNIEY NHLPVDS +RP RETVPLPPDA+NTLYVEGLP DSSRREVA I   F+G
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

A0A6J1JXN9 RNA-binding protein 2-like isoform X25.9e-8586.34Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRTEYE PSSGL   HEMHNY+A+DD GGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRP+ANRMP+G
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        +RMPGPLLPDP+VMSRP AVSPDLA NGRNIEYGNHLPVDS +RP RETVPLPPDA+NTLYVEGLP DSSRREVA I   F+G
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A2.3e-2244.02Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+++E PSS ++ GH    Y   +D      V DT+TIGSAYDRYLQSVQ     SGE    G + MGR        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        G  +      D  ++ R   +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + SRREVA I   F+G
Subjt:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

F4HWF9 Nuclear speckle RNA-binding protein B1.4e-2742.21Show/hide
Query:  HNENIVCVGSY----MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASD-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTH
        H+  I+  G Y    ++ D+++   P  P  G      T Y  PS       +MH+YL+ D D G P SVKDT++IGSAYDRYLQS+Q    PS E    
Subjt:  HNENIVCVGSY----MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASD-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTH

Query:  GEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
          +GM R   + M     MPGP + + ++     ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRREV+ I   F+G
Subjt:  GEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

G7ID19 RNA-binding protein 26.3e-4452.15Show/hide
Query:  MADDYWNRQQPLLPSP-GMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        MAD +WNRQQ  LP P GMLKRPRTEY+   SG+++G+E+HNY+A ++  G + + DT+ +GSAYDR+LQS  L+SF SGE    G +G  R V      
Subjt:  MADDYWNRQQPLLPSP-GMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAV--SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
           +PG  L DP  M     V   PDL+ NGR++ +G  LP+D++SRPG ET+PLP DAS+TLYVEGLP DS++REVA I   F+G
Subjt:  GSRMPGPLLPDPIVMSRPPAV--SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

Q6JB11 Protein MATERNALLY EXPRESSED GENE 57.6e-0557.14Show/hide
Query:  MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        M   GR   PLPPDAS+TLY+EGLP + +RREV+ I   F+G
Subjt:  MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

Q8H0P8 RNA-binding protein 12.3e-4152.72Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MAD YWNRQQ LLP  G+ KRPR +YE P+SGL +G+EMH     +D  G   VKD++TIGSAYDRYLQ  Q+ SF SGE  T G +G+ R +       
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVM-SRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
          +P   L DP  M  R     PDLAPNGR + YG   P+D +SR G E   LPPDAS TLY+EGLP D +RREVA I   F+G
Subjt:  SRMPGPLLPDPIVM-SRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.0e-2842.21Show/hide
Query:  HNENIVCVGSY----MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASD-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTH
        H+  I+  G Y    ++ D+++   P  P  G      T Y  PS       +MH+YL+ D D G P SVKDT++IGSAYDRYLQS+Q    PS E    
Subjt:  HNENIVCVGSY----MADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASD-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTH

Query:  GEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
          +GM R   + M     MPGP + + ++     ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRREV+ I   F+G
Subjt:  GEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

AT1G21320.2 nucleotide binding;nucleic acid binding1.4e-3345.79Show/hide
Query:  MADDYWNRQQ----PLLPSPGML--KRPRTEYEHPSSGLSTGHEMHNYLASD-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPV
        MAD+YWN+Q+    P+  +P +L  KRPR++++     + +G +MH+YL+ D D G P SVKDT++IGSAYDRYLQS+Q    PS E      +GM R  
Subjt:  MADDYWNRQQ----PLLPSPGML--KRPRTEYEHPSSGLSTGHEMHNYLASD-DCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPV

Query:  ANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
         + M     MPGP + + ++     ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLP + SRREV+ I   F+G
Subjt:  ANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-2344.02Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+++E PSS ++ GH    Y   +D      V DT+TIGSAYDRYLQSVQ     SGE    G + MGR        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRTEYEHPSSGLSTGHEMHNYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        G  +      D  ++ R   +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + SRREVA I   F+G
Subjt:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-0645.95Show/hide
Query:  DPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG
        D  ++ R   +  D  PNG  I +    PV      GR    LP DASNTLYVEGLP + SRREVA I   F+G
Subjt:  DPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVARIL--FIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACCGGGCCATCATTAAGGGAAGGTTATGGTGGAGTTCCTCCCAATGTTTCTTCTAATGTAGGGCGGGCGAAATTTGGGTGGGAGAGTCCTCCTAAAAGGGTACG
TACTTTGTCTTGTGATGATGGAAGGAGGATGTTCGTTAAGGGTAGTTTTGGATGGGTCTTGAGAGATCACAATGAGAATATTGTTTGCGTTGGGTCATATATGGCGGATG
ATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCTCGTACTGAATATGAACATCCATCCTCTGGATTGTCTACCGGCCATGAGATGCAC
AATTATTTAGCAAGTGATGATTGTGGTGGTCCTCGGTCTGTAAAAGATACACAAACAATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTCC
TTCCGGAGAAGTACCCACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGACCTTTATTACCTGATCCTATTGTAA
TGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTAGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTG
CCTCTTCCTCCTGATGCCTCCAACACTTTATATGTCGAAGGACTTCCTCCAGATAGTTCCCGGAGGGAAGTAGCTCGTATCCTTTTTATAGGTGGTGATGCCACAAGATA
A
mRNA sequenceShow/hide mRNA sequence
ATGAGAACCGGGCCATCATTAAGGGAAGGTTATGGTGGAGTTCCTCCCAATGTTTCTTCTAATGTAGGGCGGGCGAAATTTGGGTGGGAGAGTCCTCCTAAAAGGGTACG
TACTTTGTCTTGTGATGATGGAAGGAGGATGTTCGTTAAGGGTAGTTTTGGATGGGTCTTGAGAGATCACAATGAGAATATTGTTTGCGTTGGGTCATATATGGCGGATG
ATTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCTCGTACTGAATATGAACATCCATCCTCTGGATTGTCTACCGGCCATGAGATGCAC
AATTATTTAGCAAGTGATGATTGTGGTGGTCCTCGGTCTGTAAAAGATACACAAACAATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTCC
TTCCGGAGAAGTACCCACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGACCTTTATTACCTGATCCTATTGTAA
TGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTAGAAATATTGAGTATGGTAATCATCTTCCTGTAGATTCGATGAGCAGACCTGGACGTGAAACTGTG
CCTCTTCCTCCTGATGCCTCCAACACTTTATATGTCGAAGGACTTCCTCCAGATAGTTCCCGGAGGGAAGTAGCTCGTATCCTTTTTATAGGTGGTGATGCCACAAGATA
A
Protein sequenceShow/hide protein sequence
MRTGPSLREGYGGVPPNVSSNVGRAKFGWESPPKRVRTLSCDDGRRMFVKGSFGWVLRDHNENIVCVGSYMADDYWNRQQPLLPSPGMLKRPRTEYEHPSSGLSTGHEMH
NYLASDDCGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDSMSRPGRETV
PLPPDASNTLYVEGLPPDSSRREVARILFIGGDATR