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Lsi08G005430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:13532451..13532780
RNA-Seq ExpressionLsi08G005430
SyntenyLsi08G005430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054906.1 hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa]4.2e-2663.96Show/hide
Query:  MAPTLAYLFFAILVA--SFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPK
        MAP LAYLF AI +A  SFSPS    + TA  S+GI YPPPLP  LLF +DHS L  SPAA+EY AKPL+R N + K+KCT+A +NGNK  K +KDPWPK
Subjt:  MAPTLAYLFFAILVA--SFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPK

Query:  CPLPKSPPPPF
        CP+ KSPPPPF
Subjt:  CPLPKSPPPPF
KAE8646677.1 hypothetical protein Csa_023590, partial [Cucumis sativus]1.1e-2670.53Show/hide
Query:  ASFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPKCPLPKSPPPPF
        ASFSPS    A TAA SYGI YPPPLP PLLF +DHS L PSPAA+EY AK  RR N + K+KC++A +NGNK  KPNKDPWPKCP+PKSPPPPF
Subjt:  ASFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPKCPLPKSPPPPF
TrEMBL top hitse value%identityAlignment
A0A0A0KEF9 Uncharacterized protein2.7e-3171.17Show/hide
Query:  MAPTLAYLFFAIL--VASFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPK
        MAP LAYLF AIL  VASFSPS    A TAA SYGI YPPPLP PLLF +DHS L PSPAA+EY AK  RR N + K+KC++A +NGNK  KPNKDPWPK
Subjt:  MAPTLAYLFFAIL--VASFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPK

Query:  CPLPKSPPPPF
        CP+PKSPPPPF
Subjt:  CPLPKSPPPPF
A0A5D3DGG9 Uncharacterized protein2.0e-2663.96Show/hide
Query:  MAPTLAYLFFAILVA--SFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPK
        MAP LAYLF AI +A  SFSPS    + TA  S+GI YPPPLP  LLF +DHS L  SPAA+EY AKPL+R N + K+KCT+A +NGNK  K +KDPWPK
Subjt:  MAPTLAYLFFAILVA--SFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPK

Query:  CPLPKSPPPPF
        CP+ KSPPPPF
Subjt:  CPLPKSPPPPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAACATTGGCTTATCTATTTTTTGCCATTTTGGTGGCATCCTTCTCTCCGAGCTTGCCGTTGAGAGCCGGCACCGCCGCCAGAAGCTACGGTATTTCTTACCC
TCCACCGCTGCCACACCCACTCCTATTCCGTCACGACCACAGCTTTCTCGCACCGTCGCCAGCAGCGAAGGAGTATCTGGCAAAACCCCTCCGCCGTGCAAATGTTAAGG
GTAAAAACAAGTGTACCAAAGCACACAAAAATGGAAATAAAGTTGAAAAGCCGAACAAGGATCCTTGGCCAAAGTGCCCCCTTCCCAAATCGCCACCGCCTCCATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAACATTGGCTTATCTATTTTTTGCCATTTTGGTGGCATCCTTCTCTCCGAGCTTGCCGTTGAGAGCCGGCACCGCCGCCAGAAGCTACGGTATTTCTTACCC
TCCACCGCTGCCACACCCACTCCTATTCCGTCACGACCACAGCTTTCTCGCACCGTCGCCAGCAGCGAAGGAGTATCTGGCAAAACCCCTCCGCCGTGCAAATGTTAAGG
GTAAAAACAAGTGTACCAAAGCACACAAAAATGGAAATAAAGTTGAAAAGCCGAACAAGGATCCTTGGCCAAAGTGCCCCCTTCCCAAATCGCCACCGCCTCCATTCTAG
Protein sequenceShow/hide protein sequence
MAPTLAYLFFAILVASFSPSLPLRAGTAARSYGISYPPPLPHPLLFRHDHSFLAPSPAAKEYLAKPLRRANVKGKNKCTKAHKNGNKVEKPNKDPWPKCPLPKSPPPPF