; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G005480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr08:13635761..13637637
RNA-Seq ExpressionLsi08G005480
SyntenyLsi08G005480
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578893.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-13995.29Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRGGSRT TLLAG RG VNVV SRKLV+VAA+Q KKSW+P V+GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

KAG7016421.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.3e-13995.69Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRGGSRT TLLAG RG VNVV SRKLV+VAAAQ KKSW+P V+GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_008441527.1 PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo]1.7e-13995.69Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRG SRT TLLAG RG VNVV+S KLVV+AAAQ KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]5.9e-14096.08Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRGGSRT TLLAG RG VNVV SRKLV+VAAAQ KKSW+P V+GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_038885126.1 chlorophyll a-b binding protein CP24 10A, chloroplastic [Benincasa hispida]3.5e-14096.47Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRGGSRT TLLAGVRG VNVV+SRKLVVVAAAQ KKSWLP V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAML FYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A0A0KEF5 Chlorophyll a-b binding protein, chloroplastic7.0e-13995.69Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVL GLGSPFLRG SRT TLLAG RGSVNVV+S KLV+VAAAQ KKSWLPGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYI DTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A1S3B4E4 Chlorophyll a-b binding protein, chloroplastic8.3e-14095.69Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRG SRT TLLAG RG VNVV+S KLVV+AAAQ KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A5D3DGI0 Chlorophyll a-b binding protein, chloroplastic8.3e-14095.69Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRG SRT TLLAG RG VNVV+S KLVV+AAAQ KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1FGC5 Chlorophyll a-b binding protein, chloroplastic2.4e-13995.29Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFL GGSRT TLLAG RG VNVV SRKLV+VAAAQ KKSW+P V+GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic2.9e-14096.08Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLNGLGSPFLRGGSRT TLLAG RG VNVV SRKLV+VAAAQ KKSW+P V+GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic2.1e-3136.99Show/hide
Query:  SGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVV--VAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH
        +G+++    + FL GG R       V   +  V SR + V  VAA   +  W PG         PEWLDGSLPGDFGFDPLGLG DP  LKW  +AEL+H
Subjt:  SGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVV--VAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH

Query:  GRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
         RWAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW D   P   + +   P      N    T + GYPGG +
Subjt:  GRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE
        FDPLG+              K++ L+  EIK+ R+AMLA++  +F+
Subjt:  FDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic4.0e-12382.81Show/hide
Query:  MAATSGAVLNGLGSPFLRGGSRTHTLLAG-VRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAE
        MA TS AVLNGL S FL GG+++  LLA  +   V   A+ K   V AA AKKSW+P VRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAE
Subjt:  MAATSGAVLNGLGSPFLRGGSRTHTLLAG-VRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        LIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDP
Subjt:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        L  AGT+ +GVY+PDTEKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic9.2e-12081.71Show/hide
Query:  MAATSG-AVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQA-KKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREA
        M  TS  AVLNGL S FL GG +T  LL G   +  V   ++ VV AAA A KKSW+P V+ GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREA
Subjt:  MAATSG-AVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQA-KKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREA

Query:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD
        ELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFD
Subjt:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        PL  AGT+ +GVY+PDTEKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  PLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic5.4e-12081.47Show/hide
Query:  AATSG-AVLNGLGSPFLRGGSRTHTLLAGVRGSVNV---VASRKLVVVAAAQA-KKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYR
        AATS  A++NG  SPFL GG ++   L  V   V       SRKLVVVAAA A KKSW+P V+GGGN +DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYR
Subjt:  AATSG-AVLNGLGSPFLRGGSRTHTLLAGVRGSVNV---VASRKLVVVAAAQA-KKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYR

Query:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
        EAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKF
Subjt:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FDPL  AGTI +GVY PDT+KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic1.2e-3140.09Show/hide
Query:  KLVVVAAAQAKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--A
        +LVVV A +   S           W PG         PEWLDGSLPGDFGFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E  +
Subjt:  KLVVVAAAQAKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--A

Query:  GADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEI
          D G+   F+   +L   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EI
Subjt:  GADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEI

Query:  KHARIAMLAMLIFYFEA
        K+ R+AMLA L F F+A
Subjt:  KHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 61.6e-11981.18Show/hide
Query:  ATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVV--AAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
        A SGAVL+GLGS FL GG R  T LA   G+      RK ++V  AAAQ KKSW+P V+GGGN +DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL
Subjt:  ATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVV--AAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAV+GIFVGQAWSG+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYPGG+FFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        G AG  +DGVY PD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 68.8e-3340.09Show/hide
Query:  KLVVVAAAQAKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--A
        +LVVV A +   S           W PG         PEWLDGSLPGDFGFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E  +
Subjt:  KLVVVAAAQAKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--A

Query:  GADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEI
          D G+   F+   +L   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EI
Subjt:  GADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEI

Query:  KHARIAMLAMLIFYFEA
        K+ R+AMLA L F F+A
Subjt:  KHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 57.4e-3240.98Show/hide
Query:  LRGGSRTHTLLAGVRGSVNVVASRKLVVVAA--------AQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA
        LRGG  T   L   R + +V+  R   V AA        A  + +WLPG      L  P +LDG+L GD+GFDPLGLG+DP  LKWY +AEL+H R+AM 
Subjt:  LRGGSRTHTLLAGVRGSVNVVASRKLVVVAA--------AQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA

Query:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
         V GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +P
Subjt:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        LG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 57.4e-3240.98Show/hide
Query:  LRGGSRTHTLLAGVRGSVNVVASRKLVVVAA--------AQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA
        LRGG  T   L   R + +V+  R   V AA        A  + +WLPG      L  P +LDG+L GD+GFDPLGLG+DP  LKWY +AEL+H R+AM 
Subjt:  LRGGSRTHTLLAGVRGSVNVVASRKLVVVAA--------AQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA

Query:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
         V GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +P
Subjt:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        LG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 24.8e-3135.74Show/hide
Query:  SGAVLNGLGSPFLRGGSRTH-----TLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAE
        + + +  + SP   GG +       T+ A  R   +V A      VAA   +  W PG         PEWLDGSLPGDFGFDPLGL  DP  LKW  +AE
Subjt:  SGAVLNGLGSPFLRGGSRTH-----TLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG
        ++H RWAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW D   P S + +   P      N    T + GYPG
Subjt:  LIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG

Query:  GKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE
        G +FDPLG+              KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  GKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGTTCACCCTTCCTCCGTGGAGGTAGCAGAACTCACACCTTGTTGGCTGGAGTCCGAGGCAGTGTCAATGTTGT
TGCCTCTCGCAAGCTTGTCGTTGTCGCTGCTGCTCAGGCGAAGAAGTCTTGGCTCCCTGGCGTTAGAGGTGGCGGCAACTTGGTCGACCCAGAATGGCTTGATGGCTCAC
TTCCAGGCGACTTCGGGTTCGACCCATTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCATGGCCGGTGGGCAATGGCAGCAGTT
GTCGGAATCTTCGTAGGACAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTGCTAGGAACCCAGCT
TCTGTTAATGGGATGGGTGGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAATCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCTGAGAACTTCGCAA
ACGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGAGAAATTGGAGAGA
TTGAAGTTGGCGGAGATCAAACATGCTAGGATCGCCATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACACCATTGGGTGCTCTTGGATTGTAA
mRNA sequenceShow/hide mRNA sequence
TTGAGATTCATACTTCATAGTAAGAAATTTGGAGTGAAACATGAGGCTGAAAATTGGGCTAACAAGAGAGACCGGTCGTCCACGTGGTTGGCAGCCAAGTGGTCAGTGTA
AGAGAGGATGAAGAACTTGTTTCTCATTGGTCCGAAATCTATCCAACACCCTCCCATTAGATTTCCCTTCAGATTCTCATCTTCATAATTCCTACATGGCTCCATTTAAA
CCCACAATTCAATTCACAATTATCTCCCACACATCCTCTTCTTCATCAAATCATAAAACACAGTCCAATACATACCTGAAAAATTCCCATCTCAAACCTCCATGGCTGCA
ACTTCTGGTGCTGTGCTTAATGGCTTGGGTTCACCCTTCCTCCGTGGAGGTAGCAGAACTCACACCTTGTTGGCTGGAGTCCGAGGCAGTGTCAATGTTGTTGCCTCTCG
CAAGCTTGTCGTTGTCGCTGCTGCTCAGGCGAAGAAGTCTTGGCTCCCTGGCGTTAGAGGTGGCGGCAACTTGGTCGACCCAGAATGGCTTGATGGCTCACTTCCAGGCG
ACTTCGGGTTCGACCCATTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCATGGCCGGTGGGCAATGGCAGCAGTTGTCGGAATC
TTCGTAGGACAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTGCTAGGAACCCAGCTTCTGTTAAT
GGGATGGGTGGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAATCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCTGAGAACTTCGCAAACGCAACCG
GAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGAGAAATTGGAGAGATTGAAGTTG
GCGGAGATCAAACATGCTAGGATCGCCATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACACCATTGGGTGCTCTTGGATTGTAAAAAAAAAAAAA
TTAAAAAAAATTTGTTGATGTGAAGGTAAAATTGTTCATAATTTCACTAAAAAAAACAAGGACTGAACATGTGTTGATCATTTTGAGATAGATTTTGAAAGGGGTTTTGT
TGGAGCCCTGAAATCAAACTTCAAAATTGAGTGTGCCTCTGCCATTTCCAAAGCCTACACTTTTCCTTGTTTCAATTCTTAGTTGCTTGAATTTTGCTCAAAGTTAATGG
TGTTCATCAAAGGATGGCAAATAATAATGTGGTTCATGTTCAAAAGGTAAGTGATATGAGAGATCATAAAGAACACATTTTTCTTTTCTTACTTTGAAATTTGTAGATGG
TTAGAATGATAATTGTATTATCTGT
Protein sequenceShow/hide protein sequence
MAATSGAVLNGLGSPFLRGGSRTHTLLAGVRGSVNVVASRKLVVVAAAQAKKSWLPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLER
LKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL