CuGenDBv2

Gene ID	Lsi08G005600
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Early nodulin-like protein 1
Genome location	chr08:13791677..13794695
RNA-Seq Expression	Lsi08G005600
Synteny	Lsi08G005600
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0054969.1 early nodulin-like protein 1 [Cucumis melo var. makuwa]

2.7e-64

85.33

Show/hide

Query:  FQSGKTHLFILEIPSWHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        F  GK  L ILEIPSWHPSRLG+FFFSFNNGSKSSCNGSQK AVKVSAS P QSSHLSP NPPMAAPAP++ GVLPSTPAYPWPFHPR+GASSPSPSP +
Subjt:  FQSGKTHLFILEIPSWHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR
        PPSASVPLTVP KGG MAFINSNPAVPLPTGEVDTATIRPL TS+ GT R
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR

XP_008441507.1 PREDICTED: uncharacterized protein LOC103485611 [Cucumis melo]

4.2e-65

79.65

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLG+FFFSFNNGSKSSCNGSQK AVKVSAS P QSSHLSP NPPMAAPAP++ GVLPSTPAYPWPFHPR+GASSPSPSP +
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR---VIVAFPLLLKLSLISILFL
        PPSASVPLTVP KGG MAFINSNPAVPLPTGEVDTATIRPL TS+ GT R   VI+A PLLLK++LISILFL
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR---VIVAFPLLLKLSLISILFL

XP_022939349.1 uclacyanin-3 [Cucurbita moschata]

1.6e-64

78.95

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLGVFFF+FNNGSKSSCNGSQKLAVKV+ S P QSSHLSP NPPMAAPAPI+GGVLPSTPAYPWPFHPR+GA    PSPSL
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ
        PPS S+PLTVPEKGG + FINSNPAVPLPTGEVDTATIRPLPTSDHGT R I+ FPL LKL+LIS LFL Q
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ

XP_038884500.1 early nodulin-like protein 1 isoform X1 [Benincasa hispida]

7.2e-65

81.1

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLG+FFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSP+NPPMAAPAPI+GGVLPSTPAYPWPFHPR+GASSPSP PSL
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLI
        PPSAS+P TVPEKGG +AFINSNPAVPLPTGEVDTATIRPL TS+HGT RV     LL+ LS I
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLI

XP_038884501.1 early nodulin-like protein 1 isoform X2 [Benincasa hispida]

8.0e-72

84.21

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLG+FFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSP+NPPMAAPAPI+GGVLPSTPAYPWPFHPR+GASSPSP PSL
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ
        PPSAS+P TVPEKGG +AFINSNPAVPLPTGEVDTATIRPL TS+HGT RVI+AFPLL+KL+LISILFL+Q
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9I5 Uncharacterized protein

3.9e-64

78.11

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLG+FFFSFNNGSKSSCNGSQK AVKVS S P QSS+ SP NPPMAAPAPI+ GV+PSTPAYPWPFHPR+GASSPSPSP +
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFL
        PP+ASVPLTVP KGG MAFINSNPAVPLPTGEVDTATIRPL TS++GT RVI+A PLLLK++L SILFL
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFL

A0A1S3B358 uncharacterized protein LOC103485611

2.1e-65

79.65

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLG+FFFSFNNGSKSSCNGSQK AVKVSAS P QSSHLSP NPPMAAPAP++ GVLPSTPAYPWPFHPR+GASSPSPSP +
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR---VIVAFPLLLKLSLISILFL
        PPSASVPLTVP KGG MAFINSNPAVPLPTGEVDTATIRPL TS+ GT R   VI+A PLLLK++LISILFL
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR---VIVAFPLLLKLSLISILFL

A0A5D3DH09 Early nodulin-like protein 1

1.3e-64

85.33

Show/hide

Query:  FQSGKTHLFILEIPSWHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        F  GK  L ILEIPSWHPSRLG+FFFSFNNGSKSSCNGSQK AVKVSAS P QSSHLSP NPPMAAPAP++ GVLPSTPAYPWPFHPR+GASSPSPSP +
Subjt:  FQSGKTHLFILEIPSWHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR
        PPSASVPLTVP KGG MAFINSNPAVPLPTGEVDTATIRPL TS+ GT R
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQR

A0A6J1FGW9 uclacyanin-3

7.8e-65

78.95

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLGVFFF+FNNGSKSSCNGSQKLAVKV+ S P QSSHLSP NPPMAAPAPI+GGVLPSTPAYPWPFHPR+GA    PSPSL
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ
        PPS S+PLTVPEKGG + FINSNPAVPLPTGEVDTATIRPLPTSDHGT R I+ FPL LKL+LIS LFL Q
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ

A0A6J1JUT2 uclacyanin-3

2.3e-64

78.36

Show/hide

Query:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL
        TH  +L  P+     WHPSRLGVFFF+FNNGSKSSCNGSQKLAVKV+ S P QSSHLSP+NPPMAAPAPI+GGVLPSTPAYPWPFHPR+GA    PSPSL
Subjt:  THLFILEIPS-----WHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSL

Query:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ
        PPS S+PLTVPEKGG + FINSNPAVPLPTGEVDTATIRPLPTSDHGT R I+ FPL LKL LIS  FL Q
Subjt:  PPSASVPLTVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21090.1 Cupredoxin superfamily protein

1.0e-24

47.85

Show/hide

Query:  SWHPSRLGVFFFSFNNGSK--SSCNGSQKLAVKV---SASPPSQSSHLSPRNPPMAAPAPIT-GGVLPSTPAYPWPFHPREGASSPSPSPSLPPSASVPL
        +W+PSR G ++FSF N +    +C  +QKL V+V   +ASPPSQ        PP  AP P++ GGV+ S  +YPWP  PREG S+ SP PS  PS    +
Subjt:  SWHPSRLGVFFFSFNNGSK--SSCNGSQKLAVKV---SASPPSQSSHLSPRNPPMAAPAPIT-GGVLPSTPAYPWPFHPREGASSPSPSPSLPPSASVPL

Query:  TVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISI-LFLW
        TVP K G + FINSNPAVPLPTG+VD+ +I PLPTS +   +V++   L +KL L  + +FL+
Subjt:  TVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISI-LFLW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGTTTCAGAGTGGAAAAACCCATCTGTTCATATTGGAGATTCCATCATGGCATCCATCAAGGCTTGGCGTTTTCTTCTTTTCCTTCAACAATGGCTCTAAAAGCTC
TTGCAATGGCTCACAAAAGCTTGCTGTGAAGGTCTCTGCTTCACCTCCATCTCAAAGTTCCCACCTTTCTCCACGGAACCCTCCAATGGCGGCTCCGGCGCCGATTACCG
GCGGAGTTCTGCCGTCTACTCCGGCATACCCTTGGCCGTTTCACCCACGGGAGGGGGCGTCGTCGCCGAGTCCGTCCCCAAGCCTGCCGCCGAGTGCAAGTGTGCCGTTG
ACGGTGCCGGAGAAAGGAGGAGATATGGCGTTTATCAACAGTAATCCGGCGGTTCCACTGCCGACCGGCGAAGTGGACACTGCCACTATTCGCCCTCTGCCAACATCGGA
CCATGGAACACAAAGGGTAATCGTGGCCTTTCCTCTTCTACTTAAATTGTCTTTAATTTCAATCTTGTTTCTATGGCAATAG

mRNA sequence

Show/hide mRNA sequence

TTTTGTTATGGCAGTCCCAACCATTGCTCTGTCATTTCAAGTTCTTTCTTCTTTCTTCTTTCTCTCTCTTTCTTTCTTCAAAGACCCTGTGGCTGTGGCTCTGTTTTTTG
GTCTAAGTTTCTTCTTCTTTTGCAATCTCATATTCAGAACAACTGAAAATTTTTAAAAACATTTCTTGATGAAGATGAAGATCCATTTATCAATGCTTGTGTTCTTGTGT
TTTCTGTTTCAACTTTGTTGCTCCTCTGTTACCATTGTTGTTGATGGTGTTTCAGAGTGGAAAAACCCATCTGTTCATATTGGAGATTCCATCATGGCATCCATCAAGGC
TTGGCGTTTTCTTCTTTTCCTTCAACAATGGCTCTAAAAGCTCTTGCAATGGCTCACAAAAGCTTGCTGTGAAGGTCTCTGCTTCACCTCCATCTCAAAGTTCCCACCTT
TCTCCACGGAACCCTCCAATGGCGGCTCCGGCGCCGATTACCGGCGGAGTTCTGCCGTCTACTCCGGCATACCCTTGGCCGTTTCACCCACGGGAGGGGGCGTCGTCGCC
GAGTCCGTCCCCAAGCCTGCCGCCGAGTGCAAGTGTGCCGTTGACGGTGCCGGAGAAAGGAGGAGATATGGCGTTTATCAACAGTAATCCGGCGGTTCCACTGCCGACCG
GCGAAGTGGACACTGCCACTATTCGCCCTCTGCCAACATCGGACCATGGAACACAAAGGGTAATCGTGGCCTTTCCTCTTCTACTTAAATTGTCTTTAATTTCAATCTTG
TTTCTATGGCAATAGAAAAGGAGAGATTTTAGGATGAAGAATGTGATGATTTTTGGGGTTCCCCAATTTTTGTGTAAAAAAAAAAATGATGATTGTAATGTTTTAGAATG
GTTGATGATGAGATACAATCAATCAATGCATTTGAATGTTCTA

Protein sequence

Show/hide protein sequence

MVFQSGKTHLFILEIPSWHPSRLGVFFFSFNNGSKSSCNGSQKLAVKVSASPPSQSSHLSPRNPPMAAPAPITGGVLPSTPAYPWPFHPREGASSPSPSPSLPPSASVPL
TVPEKGGDMAFINSNPAVPLPTGEVDTATIRPLPTSDHGTQRVIVAFPLLLKLSLISILFLWQ

Lsi08G005600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome