; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G005810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:14093037..14097399
RNA-Seq ExpressionLsi08G005810
SyntenyLsi08G005810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A9M159 Uncharacterized protein4.8e-0538.46Show/hide
Query:  CLTRCQANRRNNLLVESNGRPLSVLPKTSANKTVPVSTTGRP----------GPGPRLKASSYFTSPIFPFIIKDSA-SLSRSHIKNSISLSYKGSTSFV
        CLT C A RRN+L  +S+GRP SV P+TSAN  VP+ T G P           P P    +    +P  P     +A S + SH +   S    G+ S  
Subjt:  CLTRCQANRRNNLLVESNGRPLSVLPKTSANKTVPVSTTGRP----------GPGPRLKASSYFTSPIFPFIIKDSA-SLSRSHIKNSISLSYKGSTSFV

Query:  SI-VPNKSAPTLISSLFSLPETTTPTTTSP
        SI   +  AP   SS+ S   TTTP T SP
Subjt:  SI-VPNKSAPTLISSLFSLPETTTPTTTSP

A0A0E0C424 Uncharacterized protein1.8e-0740.67Show/hide
Query:  TCLTRCQANRRNNLLVESNGRPLSVLPKTSANKTVPVSTTGRPGP-GPRLK----ASSYFTSPIFPFIIKDSASLSRSHIKNSISLSYKGSTSFVSIVPN
        TCL RCQA RR + L +S+GRPLSV P TSAN TVP  T+  P P  P  +    A+   T+P  P           +  K   S  Y G +S    V  
Subjt:  TCLTRCQANRRNNLLVESNGRPLSVLPKTSANKTVPVSTTGRPGP-GPRLK----ASSYFTSPIFPFIIKDSASLSRSHIKNSISLSYKGSTSFVSIVPN

Query:  KSAPTLISSLFSLPETTTPTTTSP----VSSSPS-IFSSKARSAFSSSSS
        +SAPT  S   S+PETTTPT  SP    + ++P+ I SS+ R A  +S++
Subjt:  KSAPTLISSLFSLPETTTPTTTSP----VSSSPS-IFSSKARSAFSSSSS

A0A0E0C426 Uncharacterized protein1.9e-0943.55Show/hide
Query:  TCLTRCQANRRNNLLVESNGRPLSVLPKTSANKTVPVSTTGRPGP-GPRLK----ASSYFTSPIFPFIIKDSASLSRSHIKNSISLSYKGSTSFVSIVPN
        TCL RCQA RR + L +S+GRPLSV P TSAN TVP  T+  P P  P  +    A+   T+P  P           +  K   S  Y G +S    V  
Subjt:  TCLTRCQANRRNNLLVESNGRPLSVLPKTSANKTVPVSTTGRPGP-GPRLK----ASSYFTSPIFPFIIKDSASLSRSHIKNSISLSYKGSTSFVSIVPN

Query:  KSAPTLISSLFSLPETTTPTTTSP
        +SAPT  S   S+PETTTPT  SP
Subjt:  KSAPTLISSLFSLPETTTPTTTSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCATTTGATCCCGTAAACATCAAACCAAATTTTCAACAATATGGAAAGAAGCTAATCAAGAAAAGAACCTGCCTCACTCGATGCCAAGCCAACCGTCGAAACAACCTTCT
AGTCGAGAGCAATGGCCGACCACTGAGTGTCCTTCCCAAGACCTCAGCAAATAAAACCGTGCCAGTCTCCACGACAGGGCGCCCTGGCCCCGGTCCACGGCTAAAAGCAT
CCTCGTATTTCACCAGCCCCATCTTCCCATTCATCATAAAAGACTCAGCATCCTTGTCAAGATCACACATCAAGAATTCCATCTCTTTGTCATACAAAGGAAGTACCTCT
TTTGTCAGCATTGTTCCCAATAAATCCGCCCCCACGTTGATATCAAGCTTGTTTTCGTTACCTGAGACAACCACACCAACCACAACGTCTCCAGTATCATCATCTCCATC
AATTTTCTCTTCAAAAGCTCGTAGCGCCTTTTCCTCTTCTTCCTCTTCATCTGCAGAATCTTTAGTCTTAAAGAACTTCATAAATGGCGCTAAGGCTTCATTCTCGTCGG
GATTTTCAACCTCTTTGTCAATTTCTGATGAAACCCCATTGCTTATAGGAGCTGGAGAAGAGCAATTAGAAGTGGAACAGAAGTTGGAGTTTGAGATTCGTGGACTTGGA
AATCTAGGAACGATGAAACTAAGAAATCTTGAGACTCGAATGACGAATTGGGAACGCAAAGATACTTACAGGGTTGAAGTCCCGCAAGGATTAGCATCCTTTTTTTGCTG
CCCACCTCATGAGCTGAGCTCGGCTTCGTCGCAGGGAACTGGGATTGAATTGAAAGAGCCGAAGAGGAAGATTTTGGCTTCAATGAATGTGCACTTGCAGTTGCATTATC
CGTTCTGTTCATGTTGTTCGGCGGGACTGTTTCTGGGCCTGCGGATGTGCAGTGTAAAAGATGGGCCGTACGACGTGGGCTTGGGCTCCAAAGTGGGCCTGAAGTTGGGC
CTGTCTTGTTTTGGGTTCATGTGGCCTGCTTTGTTAAAGGACCAACATGGGAAATAA
mRNA sequenceShow/hide mRNA sequence
GCATTTGATCCCGTAAACATCAAACCAAATTTTCAACAATATGGAAAGAAGCTAATCAAGAAAAGAACCTGCCTCACTCGATGCCAAGCCAACCGTCGAAACAACCTTCT
AGTCGAGAGCAATGGCCGACCACTGAGTGTCCTTCCCAAGACCTCAGCAAATAAAACCGTGCCAGTCTCCACGACAGGGCGCCCTGGCCCCGGTCCACGGCTAAAAGCAT
CCTCGTATTTCACCAGCCCCATCTTCCCATTCATCATAAAAGACTCAGCATCCTTGTCAAGATCACACATCAAGAATTCCATCTCTTTGTCATACAAAGGAAGTACCTCT
TTTGTCAGCATTGTTCCCAATAAATCCGCCCCCACGTTGATATCAAGCTTGTTTTCGTTACCTGAGACAACCACACCAACCACAACGTCTCCAGTATCATCATCTCCATC
AATTTTCTCTTCAAAAGCTCGTAGCGCCTTTTCCTCTTCTTCCTCTTCATCTGCAGAATCTTTAGTCTTAAAGAACTTCATAAATGGCGCTAAGGCTTCATTCTCGTCGG
GATTTTCAACCTCTTTGTCAATTTCTGATGAAACCCCATTGCTTATAGGAGCTGGAGAAGAGCAATTAGAAGTGGAACAGAAGTTGGAGTTTGAGATTCGTGGACTTGGA
AATCTAGGAACGATGAAACTAAGAAATCTTGAGACTCGAATGACGAATTGGGAACGCAAAGATACTTACAGGGTTGAAGTCCCGCAAGGATTAGCATCCTTTTTTTGCTG
CCCACCTCATGAGCTGAGCTCGGCTTCGTCGCAGGGAACTGGGATTGAATTGAAAGAGCCGAAGAGGAAGATTTTGGCTTCAATGAATGTGCACTTGCAGTTGCATTATC
CGTTCTGTTCATGTTGTTCGGCGGGACTGTTTCTGGGCCTGCGGATGTGCAGTGTAAAAGATGGGCCGTACGACGTGGGCTTGGGCTCCAAAGTGGGCCTGAAGTTGGGC
CTGTCTTGTTTTGGGTTCATGTGGCCTGCTTTGTTAAAGGACCAACATGGGAAATAA
Protein sequenceShow/hide protein sequence
AFDPVNIKPNFQQYGKKLIKKRTCLTRCQANRRNNLLVESNGRPLSVLPKTSANKTVPVSTTGRPGPGPRLKASSYFTSPIFPFIIKDSASLSRSHIKNSISLSYKGSTS
FVSIVPNKSAPTLISSLFSLPETTTPTTTSPVSSSPSIFSSKARSAFSSSSSSSAESLVLKNFINGAKASFSSGFSTSLSISDETPLLIGAGEEQLEVEQKLEFEIRGLG
NLGTMKLRNLETRMTNWERKDTYRVEVPQGLASFFCCPPHELSSASSQGTGIELKEPKRKILASMNVHLQLHYPFCSCCSAGLFLGLRMCSVKDGPYDVGLGSKVGLKLG
LSCFGFMWPALLKDQHGK