CuGenDBv2

Gene ID	Lsi08G005860
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	MRN complex-interacting protein isoform X2
Genome location	chr08:14132776..14134121
RNA-Seq Expression	Lsi08G005860
Synteny	Lsi08G005860
Gene Ontology terms	GO:0007095 - mitotic G2 DNA damage checkpoint (biological process) GO:0005634 - nucleus (cellular component) GO:0003682 - chromatin binding (molecular function)
InterPro domains	IPR032739 - MRN complex-interacting protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141004.1 MRN complex-interacting protein [Cucumis sativus]

4.7e-131

79.3

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQRKSGNKWICAVCN+KQSVQKVFARAPMAKDVRKFVQSFNMSRKYA+EQA VDEL+DGGI+DDDKL CS RRK R+DW++
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI
        YLDP E RS SG ENE ELESD    KIVTELP++KT KSGS SCSSWSE GEGDG YRP+FSKRKHIA NLSSQDEI+NWESPSAIHA K SK DDEQ 
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI

Query:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI
         S  K LSAPFQDKK+ KN HK+ DEIQNWELPS+IE S W    SKDDE+ RTK+CIL KVRG  SKWSEYIT EENCG RN ENMA E+G+D LKMMI
Subjt:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI

Query:  NDEIVEDDIHPDFK
        N+EIVEDDIHPDFK
Subjt:  NDEIVEDDIHPDFK

XP_008456719.1 PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo]

1.2e-131

80.57

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYA+EQA VD+L+ GGI+DDDKLDCS RRKRRNDW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI
        YLDPEE RS SG ENE ELESD    KI TELP++KT KSGS SCSSWSE GEGDG YRP+FSKRKHIAKNLSSQDEI+NWESPSAIH  K SK DDEQ 
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI

Query:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI
        FS  K LSAPFQDKK+ KNSHK+  EIQNWELPS+IE S W    +KDDE++RTK+CIL KVRG  SKWSEYIT EENCG RN ENMA EQG+D LK MI
Subjt:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI

Query:  NDEIVEDDIHPDFK
        NDEIVEDDIHPDFK
Subjt:  NDEIVEDDIHPDFK

XP_023549685.1 MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo]

5.1e-101

65.36

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQR+SGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ KVDE+LD  I+D+D+LD + +RKRR+DW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD
        YLD EE RSQ+G ENEREL SDFTDGKIVTELPE KTRK  STSCSS  EGGEG  +YRPVF KR HIAKN             SAI A KW K   +DD
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD

Query:  EQIFSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGPS-KWSEYITEE--NCGFRNG------------
        E++  K  NLS+               DEI+NWE  SDIE S WSKG+SKDDE+A    CILAKV GPS KWSEY+TEE  N G                
Subjt:  EQIFSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGPS-KWSEYITEE--NCGFRNG------------

Query:  --ENMATEQGVDNLKMMINDEIVEDDIHPDFK
          ++M TEQ +D LKM+INDEIVEDDIHPDFK
Subjt:  --ENMATEQGVDNLKMMINDEIVEDDIHPDFK

XP_023549686.1 MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo]

3.2e-103

68.35

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQR+SGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ KVDE+LD  I+D+D+LD + +RKRR+DW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD
        YLD EE RSQ+G ENEREL SDFTDGKIVTELPE KTRK  STSCSS  EGGEG  +YRPVF KR HIAKN             SAI A KW K   +DD
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD

Query:  EQIFSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGPS-KWSEYITEENCGFRNGENMATEQGVDNLKM
        E++  K  NLS+               DEI+NWE  SDIE S WSKG+SKDDE+A    CILAKV GPS KWSEY+TEE+      +NM TEQ +D LKM
Subjt:  EQIFSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGPS-KWSEYITEENCGFRNGENMATEQGVDNLKM

Query:  MINDEIVEDDIHPDFK
        +INDEIVEDDIHPDFK
Subjt:  MINDEIVEDDIHPDFK

XP_038885326.1 MRN complex-interacting protein [Benincasa hispida]

5.2e-138

80.89

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQRKSGN+WICAVCNEKQS+QKVFARA MAKDVRKFVQ+FNMSRKYADEQAK DELLDGGI+D+DKLDCS RRKRRNDW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI
        YLDPEE RS +G ENE ELES+ TD KIVTE+PEVKTRKSGSTSCS WSE GEGDG+YRP+FSKRKHIA NLSSQDE++NWES S I  +KWSK +DEQI
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI

Query:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGP-SKWSEYITEE-NCGFRNGENMATEQGVDNLKMMI
         SK KNLSAPFQDKK+ KNSHKI DEIQNWEL S+IE S  SK +SKDDE++RTKT ILAKVRGP SKWSEYITEE NC  RNGENMAT+Q +D LK +I
Subjt:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGP-SKWSEYITEE-NCGFRNGENMATEQGVDNLKMMI

Query:  NDEIVEDDIHPDFK
        NDEIV+DDIHPDFK
Subjt:  NDEIVEDDIHPDFK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCJ3 Uncharacterized protein

2.3e-131

79.3

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQRKSGNKWICAVCN+KQSVQKVFARAPMAKDVRKFVQSFNMSRKYA+EQA VDEL+DGGI+DDDKL CS RRK R+DW++
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI
        YLDP E RS SG ENE ELESD    KIVTELP++KT KSGS SCSSWSE GEGDG YRP+FSKRKHIA NLSSQDEI+NWESPSAIHA K SK DDEQ 
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI

Query:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI
         S  K LSAPFQDKK+ KN HK+ DEIQNWELPS+IE S W    SKDDE+ RTK+CIL KVRG  SKWSEYIT EENCG RN ENMA E+G+D LKMMI
Subjt:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI

Query:  NDEIVEDDIHPDFK
        N+EIVEDDIHPDFK
Subjt:  NDEIVEDDIHPDFK

A0A1S3C3H7 UPF0544 protein C5orf45 homolog

6.0e-132

80.57

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYA+EQA VD+L+ GGI+DDDKLDCS RRKRRNDW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI
        YLDPEE RS SG ENE ELESD    KI TELP++KT KSGS SCSSWSE GEGDG YRP+FSKRKHIAKNLSSQDEI+NWESPSAIH  K SK DDEQ 
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI

Query:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI
        FS  K LSAPFQDKK+ KNSHK+  EIQNWELPS+IE S W    +KDDE++RTK+CIL KVRG  SKWSEYIT EENCG RN ENMA EQG+D LK MI
Subjt:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI

Query:  NDEIVEDDIHPDFK
        NDEIVEDDIHPDFK
Subjt:  NDEIVEDDIHPDFK

A0A5D3BXL1 UPF0544 protein C5orf45-like protein

6.0e-132

80.57

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYA+EQA VD+L+ GGI+DDDKLDCS RRKRRNDW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI
        YLDPEE RS SG ENE ELESD    KI TELP++KT KSGS SCSSWSE GEGDG YRP+FSKRKHIAKNLSSQDEI+NWESPSAIH  K SK DDEQ 
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQI

Query:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI
        FS  K LSAPFQDKK+ KNSHK+  EIQNWELPS+IE S W    +KDDE++RTK+CIL KVRG  SKWSEYIT EENCG RN ENMA EQG+D LK MI
Subjt:  FSKVKNLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRG-PSKWSEYIT-EENCGFRNGENMATEQGVDNLKMMI

Query:  NDEIVEDDIHPDFK
        NDEIVEDDIHPDFK
Subjt:  NDEIVEDDIHPDFK

A0A6J1FH51 MRN complex-interacting protein isoform X1

1.1e-98

66.67

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Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQR+SGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ KVDE+LD  I+D+D+LD + +RKRR+DW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD
        YLD EE RSQ+G ENEREL SDF DGK VTELPE KTRK  STSCSS  EG EG  +YRPVF KR HIAKN             SAI A KW K   +DD
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD

Query:  EQIFSKVK-NLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGP-SKWSEYITE-ENCGFRNGENMATEQGVDNL
        E++  K K +LS+               DEI+NWE PS           SKDDESA    CILAKV GP SKWSEYITE +NCG R GENM TEQ +D L
Subjt:  EQIFSKVK-NLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGP-SKWSEYITE-ENCGFRNGENMATEQGVDNL

Query:  KMMINDEIVEDDIHPDFK
        KM+ NDEIVEDDIHPDFK
Subjt:  KMMINDEIVEDDIHPDFK

A0A6J1JWE4 MRN complex-interacting protein isoform X1

4.1e-96

64.98

Show/hide

Query:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE
        M TIFIAVQCFQC TMQVKQQR+SGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ KVDE+ D  I+D+D+LD + +RKRR+DW+E
Subjt:  METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNE

Query:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD
        YLD EE RSQ+G ENEREL SDF DGKIVTELPE KTRK  STSCS+  E GEG  +YRPVF KR HIAKN             SAI A KWSK   +DD
Subjt:  YLDPEEHRSQSGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSK---DDD

Query:  EQIFSKVK-NLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGPSKWSEYITE-ENCGFRNGENMATEQGVDNLK
        E++  K K +LS+               DEI+NWE  S           +KDDE+A       +KV GPSKWSEYITE +NCG R GENM TEQ +D LK
Subjt:  EQIFSKVK-NLSAPFQDKKLRKNSHKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGPSKWSEYITE-ENCGFRNGENMATEQGVDNLK

Query:  MMINDEIVEDDIHPDFK
        M+INDEIVEDDIHPDFK
Subjt:  MMINDEIVEDDIHPDFK

SwissProt top hits

e value

%identity

Alignment

Q32PP1 MRN complex-interacting protein

2.2e-06

28.37

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Query:  FIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLD--------CSVRRKRRN
        F  ++CF C T QV QQ K   KW C VC EKQS+ K F R   A D R+ VQ  N  R     Q    +LL  G  +++  D                +
Subjt:  FIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLD--------CSVRRKRRN

Query:  DWNEYLDPEEHRSQSGGENERELESDFTDGKIVTELPEVK---TRKSGSTS--------CSSWSEGGEGDGYYRP------VFSKRKHIAKNLSSQDEIK
         W++Y D       + G NE + + D  D  + TE P+ +   TRK    S        C ++ E   G   +R          KR   + N  S  +  
Subjt:  DWNEYLDPEEHRSQSGGENERELESDFTDGKIVTELPEVK---TRKSGSTS--------CSSWSEGGEGDGYYRP------VFSKRKHIAKNLSSQDEIK

Query:  NWESPSAI
        N + P  +
Subjt:  NWESPSAI

Arabidopsis top hits

e value

%identity

Alignment

AT1G71760.1 unknown protein

4.7e-28

35.74

Show/hide

Query:  TIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQA-KVDELLDGGIIDDDKLDCSVRRKRRNDWNEY
        T+FIA+QC++C TMQVKQ++KS NKW+C +CN+KQSV+KVFA+   AK++R FVQSFNMSRK ADE+A  V +      ++ +  +     K+R+DW++Y
Subjt:  TIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQA-KVDELLDGGIIDDDKLDCSVRRKRRNDWNEY

Query:  LDPEEHRSQSGGENERELESDFTDGKIVTELPE--------VKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQD--------EIKNWESPS
        LD +         + R L  +  D KIVTE+P          K   +G +S ++  E  + +  ++P FS+R     +  S +        E +N ES  
Subjt:  LDPEEHRSQSGGENERELESDFTDGKIVTELPE--------VKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQD--------EIKNWESPS

Query:  AIH-ALKWSKDDDEQIFSKVKNLSAP--FQDKKLRKNSHKIGDEIQNWE
            A KW    D  +        AP  F  KK  K+     DE+  W+
Subjt:  AIH-ALKWSKDDDEQIFSKVKNLSAP--FQDKKLRKNSHKIGDEIQNWE

AT1G71760.2 unknown protein

2.1e-28

41.28

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Query:  TIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQA-KVDELLDGGIIDDDKLDCSVRRKRRNDWNEY
        T+FIA+QC++C TMQVKQ++KS NKW+C +CN+KQSV+KVFA+   AK++R FVQSFNMSRK ADE+A  V +      ++ +  +     K+R+DW++Y
Subjt:  TIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQA-KVDELLDGGIIDDDKLDCSVRRKRRNDWNEY

Query:  LDPEEHRSQSGGENERELESDFTDGKIVTELPE--------VKTRKSGSTSCSSWSEGGEGDGYYRPVFSKR
        LD +         + R L  +  D KIVTE+P          K   +G +S ++  E  + +  ++P FS+R
Subjt:  LDPEEHRSQSGGENERELESDFTDGKIVTELPE--------VKTRKSGSTSCSSWSEGGEGDGYYRPVFSKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGACGATCTTCATCGCCGTCCAGTGTTTTCAATGCTTCACCATGCAGGTGAAGCAGCAGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAATGAGAAGCA
ATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATGGCTAAAGACGTTCGTAAGTTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGGCTAAAGTCGACG
AGCTACTTGATGGAGGAATTATTGACGACGATAAACTCGATTGCAGTGTGAGGAGAAAAAGACGTAACGACTGGAATGAATATCTCGATCCCGAGGAACATCGCAGCCAA
AGCGGAGGAGAAAACGAACGAGAATTAGAGAGTGATTTTACTGACGGAAAGATTGTGACGGAGCTTCCAGAAGTTAAAACCAGGAAATCTGGTTCAACGAGCTGTTCAAG
CTGGTCGGAAGGTGGAGAAGGCGATGGATATTACAGACCAGTTTTCTCGAAGAGGAAACATATTGCCAAGAATTTGAGCTCTCAAGATGAGATAAAAAACTGGGAGTCGC
CATCAGCCATTCACGCATTGAAATGGAGTAAAGACGACGATGAACAAATTTTCTCGAAGGTGAAGAACTTGAGTGCACCTTTCCAGGACAAAAAGTTGAGGAAAAACAGT
CATAAAATTGGAGATGAGATTCAAAACTGGGAGTTGCCATCAGACATTGAAGAATCAAATTGGAGTAAAGGTATATCAAAAGATGATGAAAGTGCAAGGACGAAGACTTG
CATATTAGCTAAGGTAAGAGGACCTTCCAAGTGGAGTGAATACATAACTGAAGAAAACTGCGGATTCAGAAATGGAGAGAATATGGCAACAGAACAGGGCGTAGATAACT
TGAAGATGATGATAAACGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAGTGA

mRNA sequence

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CAAAATCAAAATCAAAATCCGTAAAAGCATTTGAGAATCGAAGTAGGAAATGGAGACGATCTTCATCGCCGTCCAGTGTTTTCAATGCTTCACCATGCAGGTGAAGCAGC
AGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAATGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATGGCTAAAGACGTTCGTAAGTTCGTACAG
AGCTTCAATATGTCTCGGAAATATGCGGATGAACAGGCTAAAGTCGACGAGCTACTTGATGGAGGAATTATTGACGACGATAAACTCGATTGCAGTGTGAGGAGAAAAAG
ACGTAACGACTGGAATGAATATCTCGATCCCGAGGAACATCGCAGCCAAAGCGGAGGAGAAAACGAACGAGAATTAGAGAGTGATTTTACTGACGGAAAGATTGTGACGG
AGCTTCCAGAAGTTAAAACCAGGAAATCTGGTTCAACGAGCTGTTCAAGCTGGTCGGAAGGTGGAGAAGGCGATGGATATTACAGACCAGTTTTCTCGAAGAGGAAACAT
ATTGCCAAGAATTTGAGCTCTCAAGATGAGATAAAAAACTGGGAGTCGCCATCAGCCATTCACGCATTGAAATGGAGTAAAGACGACGATGAACAAATTTTCTCGAAGGT
GAAGAACTTGAGTGCACCTTTCCAGGACAAAAAGTTGAGGAAAAACAGTCATAAAATTGGAGATGAGATTCAAAACTGGGAGTTGCCATCAGACATTGAAGAATCAAATT
GGAGTAAAGGTATATCAAAAGATGATGAAAGTGCAAGGACGAAGACTTGCATATTAGCTAAGGTAAGAGGACCTTCCAAGTGGAGTGAATACATAACTGAAGAAAACTGC
GGATTCAGAAATGGAGAGAATATGGCAACAGAACAGGGCGTAGATAACTTGAAGATGATGATAAACGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAGTGATA
TTGACTCTGCTAATGAGATTTTGTTTAGCAACTATTGTTTTAGTAGATTTTGAGTTAATTCAAACGCTTGGAAATATATTTTTGGGTAAAATAACAATTTTTGATC

Protein sequence

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METIFIAVQCFQCFTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQAKVDELLDGGIIDDDKLDCSVRRKRRNDWNEYLDPEEHRSQ
SGGENERELESDFTDGKIVTELPEVKTRKSGSTSCSSWSEGGEGDGYYRPVFSKRKHIAKNLSSQDEIKNWESPSAIHALKWSKDDDEQIFSKVKNLSAPFQDKKLRKNS
HKIGDEIQNWELPSDIEESNWSKGISKDDESARTKTCILAKVRGPSKWSEYITEENCGFRNGENMATEQGVDNLKMMINDEIVEDDIHPDFK

Lsi08G005860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome