; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G005890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G005890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPhospho-N-acetylmuramoyl-pentapeptide-transferase
Genome locationchr08:14159471..14167901
RNA-Seq ExpressionLsi08G005890
SyntenyLsi08G005890
Gene Ontology termsNA
InterPro domainsIPR009943 - Protein of unknown function DUF1475


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578860.1 hypothetical protein SDJN03_23308, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6061.16Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQD--------------------------------------MCSWMVATLIDFYINGTALS
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PN +   Q                                          WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQD--------------------------------------MCSWMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

KAG7016393.1 hypothetical protein SDJN02_21502 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-6473.66Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDMCSWMVATLIDFYINGTALSVWMFYKEESWLTAFVWIVLFIIFG
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PNN         WMVATLIDFYINGTALSVWMFYKEESWLTA +WI LFIIFG
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDMCSWMVATLIDFYINGTALSVWMFYKEESWLTAFVWIVLFIIFG

XP_022992682.1 uncharacterized protein LOC111488951 isoform X1 [Cucurbita maxima]4.0e-6162.05Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PN +   Q                  CS                      WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

XP_022992683.1 uncharacterized protein LOC111488951 isoform X2 [Cucurbita maxima]4.0e-6162.05Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PN +   Q                  CS                      WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

XP_022992684.1 uncharacterized protein LOC111488951 isoform X3 [Cucurbita maxima]4.0e-6162.05Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PN +   Q                  CS                      WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

TrEMBL top hitse value%identityAlignment
A0A6J1FFW0 uncharacterized protein LOC111445346 isoform X12.8e-6061.16Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV TLIDFY NVIVI     WVCYKE NW AAAIWIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQD--------------------------------------MCSWMVATLIDFYINGTALS
         ++ATCAYILW LWQLSS ESFEDI+YNVL K+PN +   Q                                          WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQD--------------------------------------MCSWMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

A0A6J1FLM6 uncharacterized protein LOC111445346 isoform X32.8e-6061.16Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV TLIDFY NVIVI     WVCYKE NW AAAIWIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQD--------------------------------------MCSWMVATLIDFYINGTALS
         ++ATCAYILW LWQLSS ESFEDI+YNVL K+PN +   Q                                          WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQD--------------------------------------MCSWMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

A0A6J1JQK7 uncharacterized protein LOC111488951 isoform X11.9e-6162.05Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PN +   Q                  CS                      WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

A0A6J1JY71 uncharacterized protein LOC111488951 isoform X31.9e-6162.05Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PN +   Q                  CS                      WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

A0A6J1JZY5 uncharacterized protein LOC111488951 isoform X21.9e-6162.05Show/hide
Query:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED
        M SSAVIGWRILF+LLGCTMVATL YT+ATDGSPFRRELLSRLMV  LIDFY NVIVI     WVCYKE NW AAA+WIVFL    CL            
Subjt:  MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTED

Query:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS
         ++ATCAYILWQLWQLSS ESFEDI+YNVLIK+PN +   Q                  CS                      WMVATLIDFYINGTALS
Subjt:  DNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDM----------------CS----------------------WMVATLIDFYINGTALS

Query:  VWMFYKEESWLTAFVWIVLFIIFG
        VWMFYKEESWLTA +WI LFIIFG
Subjt:  VWMFYKEESWLTAFVWIVLFIIFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22750.1 unknown protein4.3e-2129.65Show/hide
Query:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE
        T+S V G +++  ++ C M+ATLVYTI TDG P   R+++ +   V T++DFY+N   +V I  W+ YKE  W  + +W + L     LT          
Subjt:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE

Query:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA
             TC Y+  QL +L++ E+ ED MY +L++D                                              + +  WMV  L++FYI+   
Subjt:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA

Query:  LSVWMFYKEESWLTAFVWIVLFIIFG
        LSVW+ YKE S +   +W+ L I  G
Subjt:  LSVWMFYKEESWLTAFVWIVLFIIFG

AT1G22750.2 unknown protein4.3e-2129.65Show/hide
Query:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE
        T+S V G +++  ++ C M+ATLVYTI TDG P   R+++ +   V T++DFY+N   +V I  W+ YKE  W  + +W + L     LT          
Subjt:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE

Query:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA
             TC Y+  QL +L++ E+ ED MY +L++D                                              + +  WMV  L++FYI+   
Subjt:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA

Query:  LSVWMFYKEESWLTAFVWIVLFIIFG
        LSVW+ YKE S +   +W+ L I  G
Subjt:  LSVWMFYKEESWLTAFVWIVLFIIFG

AT1G22750.3 unknown protein4.3e-2129.65Show/hide
Query:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE
        T+S V G +++  ++ C M+ATLVYTI TDG P   R+++ +   V T++DFY+N   +V I  W+ YKE  W  + +W + L     LT          
Subjt:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE

Query:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA
             TC Y+  QL +L++ E+ ED MY +L++D                                              + +  WMV  L++FYI+   
Subjt:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA

Query:  LSVWMFYKEESWLTAFVWIVLFIIFG
        LSVW+ YKE S +   +W+ L I  G
Subjt:  LSVWMFYKEESWLTAFVWIVLFIIFG

AT1G22750.4 unknown protein4.3e-2129.65Show/hide
Query:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE
        T+S V G +++  ++ C M+ATLVYTI TDG P   R+++ +   V T++DFY+N   +V I  W+ YKE  W  + +W + L     LT          
Subjt:  TSSAVIGWRILFLLLGCTMVATLVYTIATDGSPF--RRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTE

Query:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA
             TC Y+  QL +L++ E+ ED MY +L++D                                              + +  WMV  L++FYI+   
Subjt:  DDNVATCAYILWQLWQLSSHESFEDIMYNVLIKDPNNSSTS---------------------------------------QDMCSWMVATLIDFYINGTA

Query:  LSVWMFYKEESWLTAFVWIVLFIIFG
        LSVW+ YKE S +   +W+ L I  G
Subjt:  LSVWMFYKEESWLTAFVWIVLFIIFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGCTCAGCCGTAATTGGGTGGAGGATTCTGTTCCTTCTACTGGGATGCACCATGGTTGCAACTCTCGTATACACAATCGCCACTGATGGCTCTCCTTTCCGCAG
AGAACTTCTCTCACGGTTAATGGTGGCAACATTAATTGATTTCTATCTCAATGTCATAGTTATTGTGACCATTTGGACATGGGTTTGCTATAAGGAACCAAACTGGTTTG
CTGCAGCGATTTGGATAGTTTTTCTCCCTAACAAAGCTTGTTTGACCATAGGATATATTAGTGTGAATAATACTGAAGATGATAATGTAGCTACTTGTGCCTACATTCTT
TGGCAGTTGTGGCAATTATCATCTCACGAATCCTTTGAAGATATTATGTACAATGTTCTGATCAAGGATCCAAACAATAGCAGTACTAGTCAAGATATGTGCAGCTGGAT
GGTGGCCACGCTGATTGATTTCTATATAAATGGCACAGCTTTATCAGTCTGGATGTTCTATAAAGAAGAATCTTGGCTTACTGCGTTCGTTTGGATAGTTCTATTCATAA
TCTTTGGGAGGTAA
mRNA sequenceShow/hide mRNA sequence
AAGGAACAAGACCACGTGGACCCGTCGTTTCCATTAACTTCCGTCGTCTTCAACCCCCGCGGTTGCTCCACCTGCTTTCTTCCTTCCACAGCTCTACTCATCACTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTATCATTGCTTTTCCAATGACGAGCTCAGCCGTAATTGGGTGGAGGATTCTGTTCCTTCTACTGGGATGC
ACCATGGTTGCAACTCTCGTATACACAATCGCCACTGATGGCTCTCCTTTCCGCAGAGAACTTCTCTCACGGTTAATGGTGGCAACATTAATTGATTTCTATCTCAATGT
CATAGTTATTGTGACCATTTGGACATGGGTTTGCTATAAGGAACCAAACTGGTTTGCTGCAGCGATTTGGATAGTTTTTCTCCCTAACAAAGCTTGTTTGACCATAGGAT
ATATTAGTGTGAATAATACTGAAGATGATAATGTAGCTACTTGTGCCTACATTCTTTGGCAGTTGTGGCAATTATCATCTCACGAATCCTTTGAAGATATTATGTACAAT
GTTCTGATCAAGGATCCAAACAATAGCAGTACTAGTCAAGATATGTGCAGCTGGATGGTGGCCACGCTGATTGATTTCTATATAAATGGCACAGCTTTATCAGTCTGGAT
GTTCTATAAAGAAGAATCTTGGCTTACTGCGTTCGTTTGGATAGTTCTATTCATAATCTTTGGGAGGTAA
Protein sequenceShow/hide protein sequence
MTSSAVIGWRILFLLLGCTMVATLVYTIATDGSPFRRELLSRLMVATLIDFYLNVIVIVTIWTWVCYKEPNWFAAAIWIVFLPNKACLTIGYISVNNTEDDNVATCAYIL
WQLWQLSSHESFEDIMYNVLIKDPNNSSTSQDMCSWMVATLIDFYINGTALSVWMFYKEESWLTAFVWIVLFIIFGR