CuGenDBv2

Gene ID	Lsi08G006110
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Epidermal patterning factor-like protein
Genome location	chr08:14445513..14447946
RNA-Seq Expression	Lsi08G006110
Synteny	Lsi08G006110
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140931.1 protein EPIDERMAL PATTERNING FACTOR 2 [Cucumis sativus]

1.3e-52

91.15

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK  PLVAHIS LF IFFIILMIG SLDA TRWDHMSFNAEDTHRT+ +SRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYY
        PT+YRCMCKGKYY
Subjt:  PTIYRCMCKGKYY

XP_008456675.1 PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]

2.8e-55

93.86

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK FPLVAHIS LFGIFFIILMIGRSLDA  RWDHMSFNAEDTHRTV NSR+QQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+YRCMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

XP_022134337.1 protein EPIDERMAL PATTERNING FACTOR 2-like [Momordica charantia]

9.3e-51

84.21

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK   LVAH+S +F +FFIILMIGRSLDAT+RW+HMSFNAED HRTV +S HQ+E+ KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+YRCMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

XP_022957958.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Cucurbita moschata]

2.9e-52

85.96

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK F +VAH+S LFGIFFIILMIGRSLD TTRWDHMS+NAED HRT G+ R ++EK KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+YRCMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

XP_038885051.1 protein EPIDERMAL PATTERNING FACTOR 2-like [Benincasa hispida]

7.4e-56

92.11

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MKSFPLVAH S LFGIFFIILM GRSLDATTRWDHMSFNAEDTHR V NSRH+QEKT+EVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+Y+CMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB66 Epidermal patterning factor-like protein

6.3e-53

91.15

Show/hide

Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK  PLVAHIS LF IFFIILMIG SLDA TRWDHMSFNAEDTHRT+ +SRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYY
        PT+YRCMCKGKYY
Subjt:  PTIYRCMCKGKYY

A0A1S3C3W6 Epidermal patterning factor-like protein

1.4e-55

93.86

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK FPLVAHIS LFGIFFIILMIGRSLDA  RWDHMSFNAEDTHRTV NSR+QQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+YRCMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

A0A6J1BZC6 Epidermal patterning factor-like protein

4.5e-51

84.21

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK   LVAH+S +F +FFIILMIGRSLDAT+RW+HMSFNAED HRTV +S HQ+E+ KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+YRCMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

A0A6J1H1R6 Epidermal patterning factor-like protein

1.4e-52

85.96

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK F +VAH+S LFGIFFIILMIGRSLD TTRWDHMS+NAED HRT G+ R ++EK KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+YRCMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

A0A6J1JQJ5 Epidermal patterning factor-like protein

5.9e-51

85.96

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Query:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK FPLVA  + LF IFFIILMIGR LDA+TRWDHM FNAEDTHR VG+S HQ+EKT+E LGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTIYRCMCKGKYYH
        PT+YRCMCKGKYYH
Subjt:  PTIYRCMCKGKYYH

SwissProt top hits

e value

%identity

Alignment

C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 7

2.2e-15

65.96

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Query:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH
        +GSS+PDCS+ACGPC PCK V++S  CS +E+CP +Y+C+CKGKYYH
Subjt:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH

Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 2

6.1e-21

66.67

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Query:  SRHQQEKTKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH
        + H++E +K   + ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC  IYRC C+G+YYH
Subjt:  SRHQQEKTKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH

Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 1

9.8e-11

37.74

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Query:  SQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VAESCPTIYRCM
        S L   FF+    G  L       H+  ++  +H  VG +   + + +    +++   GS LPDCSHACG C PC+ VMVSF C+    AE+CP  Y+CM
Subjt:  SQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VAESCPTIYRCM

Query:  CKGKYY
        C  K Y
Subjt:  CKGKYY

Arabidopsis top hits

e value

%identity

Alignment

AT1G34245.1 Putative membrane lipoprotein

4.3e-22

66.67

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Query:  SRHQQEKTKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH
        + H++E +K   + ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC  IYRC C+G+YYH
Subjt:  SRHQQEKTKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH

AT1G71866.1 LOCATED IN: endomembrane system

1.6e-16

65.96

Show/hide

Query:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH
        +GSS+PDCS+ACGPC PCK V++S  CS +E+CP +Y+C+CKGKYYH
Subjt:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMCKGKYYH

AT2G20875.1 epidermal patterning factor 1

6.9e-12

37.74

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Query:  SQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VAESCPTIYRCM
        S L   FF+    G  L       H+  ++  +H  VG +   + + +    +++   GS LPDCSHACG C PC+ VMVSF C+    AE+CP  Y+CM
Subjt:  SQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VAESCPTIYRCM

Query:  CKGKYY
        C  K Y
Subjt:  CKGKYY

Sequences

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CDS sequence

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ATGGCCATGAAGAGTTTCCCACTTGTGGCTCACATTTCTCAACTTTTCGGAATTTTCTTCATCATACTAATGATTGGTAGAAGTCTTGATGCAACAACTCGGTGGGATCA
CATGAGCTTTAATGCAGAAGATACTCATAGAACAGTTGGCAATTCAAGGCACCAGCAGGAAAAAACTAAAGAAGTACTTGGTATGGAGTTATACCCTACAGGATCCAGCC
TCCCAGACTGTTCCCATGCATGTGGACCATGTTTTCCGTGCAAAAGGGTGATGGTGAGCTTCAAATGCTCTGTTGCAGAGTCTTGTCCAACTATCTACAGATGCATGTGT
AAAGGGAAATATTATCACACGATCGAAATCAAGAAAGGCAACGCAAACTTTTCATTTGGTAAAACGGCGGCCAATATACGTCCACCTATAACGATTCGAATTGGAAAACC
CCTTCGATCAGTTAAACAACATAATCGTTCGTCGAGCAGCAAATATTATCAGTCACTTCGACAAAAAAATCAAGTAGAATTAGATAATCTGACACTCAACCCAATTCCAA
GAAAAAAGAGACACACACACGCGAATTCAGTAACCTTTCCAAACATCAGCTTTACATCTGAATCCGGACTATCAACTGACTCTACTGGAACCATCCCCGCCGTTTCCCCT
AGAGCAACAAGGGTTTCCATTCCCATGATGGTGATTATCATCATCCTCCTGATCGCTGCCGTCCTCGTCAAAGGGTTTCTGCTTGTGGAATATACAGCACTTCTTCGAAC
TCTTCTTCTGCATGAACTCGTTGTCGACGGTCCCTTCCTTCCATGA

mRNA sequence

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Protein sequence

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MAMKSFPLVAHISQLFGIFFIILMIGRSLDATTRWDHMSFNAEDTHRTVGNSRHQQEKTKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTIYRCMC
KGKYYHTIEIKKGNANFSFGKTAANIRPPITIRIGKPLRSVKQHNRSSSSKYYQSLRQKNQVELDNLTLNPIPRKKRHTHANSVTFPNISFTSESGLSTDSTGTIPAVSP
RATRVSIPMMVIIIILLIAAVLVKGFLLVEYTALLRTLLLHELVVDGPFLP

Lsi08G006110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome