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Lsi08G006160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G006160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:14489806..14490630
RNA-Seq ExpressionLsi08G006160
SyntenyLsi08G006160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031696.1 uncharacterized protein E6C27_scaffold139G004800 [Cucumis melo var. makuwa]1.4e-2676Show/hide
Query:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR
        MKPLI KSLL+P L+TFLL+ FS HLHTPTQAAR+L P PGS VA TSLPL L SS  YQVD L  HLP   RKLGET+SST+TSLRRIPRSGPNPTQNR
Subjt:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR

KAG6578843.1 hypothetical protein SDJN03_23291, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1674.07Show/hide
Query:  LHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLLH-LPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNRMKPKLRS
        L TPTQAAR+LLP+P   VASTS      SSSLYQVD+LH LP T RKL ET SST++SLRRIPRSGPNPTQNRMKP+LRS
Subjt:  LHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLLH-LPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNRMKPKLRS

KAG7016372.1 hypothetical protein SDJN02_21480, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1970.48Show/hide
Query:  MKPLIYKSLLLPFLYTFLLMFSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLLH-LPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNRMK
        MKPLI KS L+P L +FLLM    L TPTQAAR+LLP+P   VASTS      SSSLYQVD+LH LP T RKL ET SST++SLRRIPRSGPNPTQNRMK
Subjt:  MKPLIYKSLLLPFLYTFLLMFSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLLH-LPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNRMK

Query:  PKLRS
        P+LRS
Subjt:  PKLRS

TYK04416.1 uncharacterized protein E5676_scaffold409G00120 [Cucumis melo var. makuwa]2.0e-3077.57Show/hide
Query:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR
        MKPLI KSLL+P L+TFLL+ FS HLHTPTQAAR+L P PGS VA TSLPL L SS  YQVD L  HLP   RKLGET+SST+TSLRRIPRSGPNPTQNR
Subjt:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR

Query:  MKPKLRS
        MKPKLRS
Subjt:  MKPKLRS

XP_011656590.1 uncharacterized protein LOC105435754 [Cucumis sativus]1.3e-3282.41Show/hide
Query:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLP--LPSSSLYQVDLL-HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQN
        MKPLI KSLL+P LYTFLL+ FS HLHTPTQAAR+LLP PGS VASTSLPLP  L SSS YQVDLL HLP   RKLGET+SST+TSLRRIPRSGPNPTQN
Subjt:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLP--LPSSSLYQVDLL-HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQN

Query:  RMKPKLRS
        RMKPKLRS
Subjt:  RMKPKLRS

TrEMBL top hitse value%identityAlignment
A0A5A7SNV6 Uncharacterized protein6.6e-2776Show/hide
Query:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR
        MKPLI KSLL+P L+TFLL+ FS HLHTPTQAAR+L P PGS VA TSLPL L SS  YQVD L  HLP   RKLGET+SST+TSLRRIPRSGPNPTQNR
Subjt:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR

A0A5D3C1X0 Uncharacterized protein9.9e-3177.57Show/hide
Query:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR
        MKPLI KSLL+P L+TFLL+ FS HLHTPTQAAR+L P PGS VA TSLPL L SS  YQVD L  HLP   RKLGET+SST+TSLRRIPRSGPNPTQNR
Subjt:  MKPLIYKSLLLPFLYTFLLM-FSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLL--HLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNR

Query:  MKPKLRS
        MKPKLRS
Subjt:  MKPKLRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTTTGATCTACAAATCATTGTTGCTTCCATTTCTCTACACTTTTCTACTGATGTTTTCTCTCCATCTTCACACTCCTACTCAAGCTGCAAGAATCCTCCTCCC
CCTCCCGGGTTCTCCTGTTGCTTCTACGTCATTACCGTTACCATTACCGTCATCATCGTTGTATCAAGTTGATCTTCTTCATCTTCCTCGCACAACTCGAAAGCTCGGCG
AAACGACATCATCTACTACCACCAGCCTTCGTCGAATACCTCGTAGCGGCCCGAATCCCACACAGAACAGAATGAAGCCTAAGTTGAGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTAGCAGAAACAAAGGAGGCAGTTGAAGACAAAAGTTGAAAACTTGTTAAAACTTATATAAAGAGGCAGTCCAAGTTGTTAGAGTTGAAAAACAAACAAGACATTGA
TTCTCTCAGAGCTTCACAAAAAAACATGAAACCTTTGATCTACAAATCATTGTTGCTTCCATTTCTCTACACTTTTCTACTGATGTTTTCTCTCCATCTTCACACTCCTA
CTCAAGCTGCAAGAATCCTCCTCCCCCTCCCGGGTTCTCCTGTTGCTTCTACGTCATTACCGTTACCATTACCGTCATCATCGTTGTATCAAGTTGATCTTCTTCATCTT
CCTCGCACAACTCGAAAGCTCGGCGAAACGACATCATCTACTACCACCAGCCTTCGTCGAATACCTCGTAGCGGCCCGAATCCCACACAGAACAGAATGAAGCCTAAGTT
GAGAAGCTAAATCTTAAATGAATCATCAAGATGAAGAAGAAGAAGAAACAAATGTTCAAAGGAATGTCAAAGCCAAAGCATTTCTTCTAGTTTTCTTTTTTATACTAAGA
ACAAAGATTCATAGCTATAGAAATACAGTAGAAAACTGACTGTTACATACAAAGTTTGATTACAAAGTTGTTTCTTTAAAGACCTTCTTGTGTATGTGTAGATTATCAAA
TGTTAAATCAACTTCTACAATTTTGATCTGTTTCGAGTCTAAGCCGAAACTTATTCG
Protein sequenceShow/hide protein sequence
MKPLIYKSLLLPFLYTFLLMFSLHLHTPTQAARILLPLPGSPVASTSLPLPLPSSSLYQVDLLHLPRTTRKLGETTSSTTTSLRRIPRSGPNPTQNRMKPKLRS