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Lsi08G006360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G006360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:14694532..14694933
RNA-Seq ExpressionLsi08G006360
SyntenyLsi08G006360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016354.1 hypothetical protein SDJN02_21462, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-2578.72Show/hide
Query:  KPLLTSFISGMGSKPQETTQYLEHAGDAKDC-GGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSS----IELKDSSNLTTMKQSEVPDKE
        KP LTS ISGMGSKPQETTQYLE +GDAKDC GGGDLES   SPE+FS SVDQLNQ+FNKSLVLKSSSS    IE+KDSS L +MKQSEV DKE
Subjt:  KPLLTSFISGMGSKPQETTQYLEHAGDAKDC-GGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSS----IELKDSSNLTTMKQSEVPDKE

TYK11779.1 uncharacterized protein E5676_scaffold304G001060 [Cucumis melo var. makuwa]7.3e-2281.01Show/hide
Query:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        MGSK Q+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSNLT MK SE   KE
Subjt:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

XP_008456616.1 PREDICTED: uncharacterized protein LOC103496521 isoform X4 [Cucumis melo]2.4e-2079.22Show/hide
Query:  SKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        +KP +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSNLT MK SE   KE
Subjt:  SKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

XP_011656573.1 uncharacterized protein LOC105435753 isoform X1 [Cucumis sativus]3.6e-2178.48Show/hide
Query:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        MGSKPQ+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSS+ T MK S+   KE
Subjt:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

XP_038885898.1 uncharacterized protein LOC120076204 [Benincasa hispida]2.6e-2793.24Show/hide
Query:  ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKED
        ETTQYLEHAGDAKDCGG DLESCARSPEDFSLSVDQLNQDFNKSLVLK+SSSIELKDSSNL TMKQSEVPDK++
Subjt:  ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKED

TrEMBL top hitse value%identityAlignment
A0A0A0KE76 Uncharacterized protein1.8e-2178.48Show/hide
Query:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        MGSKPQ+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSS+ T MK S+   KE
Subjt:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

A0A1S3C387 uncharacterized protein LOC103496521 isoform X12.1e-1980.82Show/hide
Query:  ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSNLT MK SE   KE
Subjt:  ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

A0A1S3C4C1 uncharacterized protein LOC103496521 isoform X32.1e-1980.82Show/hide
Query:  ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSNLT MK SE   KE
Subjt:  ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

A0A1S3C4Y0 uncharacterized protein LOC103496521 isoform X41.1e-2079.22Show/hide
Query:  SKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        +KP +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSNLT MK SE   KE
Subjt:  SKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

A0A5D3CNF7 Uncharacterized protein3.5e-2281.01Show/hide
Query:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE
        MGSK Q+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSNLT MK SE   KE
Subjt:  MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAACCTTTACTCACATCTTTTATTTCTGGTATGGGTTCAAAACCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGCAAAGGATTGCGGTGGTGGTGACCTAGA
GAGCTGTGCTCGTAGCCCCGAGGATTTCTCCTTGAGTGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAAGTTCATCCTCAATTGAATTAAAGGATA
GTTCTAATCTGACGACTATGAAGCAATCAGAAGTTCCTGACAAGGAAGATTATGATCTCTTTCCTTTCCCCAAATAA
mRNA sequenceShow/hide mRNA sequence
AAACCTTTACTCACATCTTTTATTTCTGGTATGGGTTCAAAACCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGCAAAGGATTGCGGTGGTGGTGACCTAGA
GAGCTGTGCTCGTAGCCCCGAGGATTTCTCCTTGAGTGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAAGTTCATCCTCAATTGAATTAAAGGATA
GTTCTAATCTGACGACTATGAAGCAATCAGAAGTTCCTGACAAGGAAGATTATGATCTCTTTCCTTTCCCCAAATAA
Protein sequenceShow/hide protein sequence
KPLLTSFISGMGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKEDYDLFPFPK