; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G006400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G006400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCationic amino acid transporter 6
Genome locationchr08:14724274..14724666
RNA-Seq ExpressionLsi08G006400
SyntenyLsi08G006400
Gene Ontology termsGO:0003333 - amino acid transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015171 - amino acid transmembrane transporter activity (molecular function)
InterPro domainsIPR004841 - Amino acid permease/ SLC12A domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578824.1 Cationic amino acid transporter 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.2e-5796.06Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAYLRALSL PSRLSRRAFSVSTSFDEMT+TR TSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ+AGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

XP_022939746.1 cationic amino acid transporter 6, chloroplastic-like [Cucurbita moschata]3.2e-5796.06Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAYLRALSL PSRLSRRAFSVSTSFDEMT+TR TSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ+AGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

XP_022992703.1 cationic amino acid transporter 6, chloroplastic-like [Cucurbita maxima]3.2e-5796.06Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAYLRALSL PSRLSRRAFSVSTSFDEMT+TR TSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ+AGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

XP_023550937.1 cationic amino acid transporter 6, chloroplastic-like [Cucurbita pepo subsp. pepo]3.2e-5796.06Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAYLRALSL PSRLSRRAFSVSTSFDEMT+TR TSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ+AGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

XP_038884239.1 cationic amino acid transporter 7, chloroplastic-like [Benincasa hispida]1.3e-5897.64Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFS YLRALSLTPSR SRRAFSVSTSFDEMTTTRSTSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

TrEMBL top hitse value%identityAlignment
A0A0A0KCF7 AA_permease_C domain-containing protein5.9e-5795.28Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAY  ALS TPSRLSRRAFSVSTSFDEMTTTRSTSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPAT QAGPAIV+SYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

A0A6J1FGS4 cationic amino acid transporter 6, chloroplastic-like1.5e-5796.06Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAYLRALSL PSRLSRRAFSVSTSFDEMT+TR TSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ+AGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

A0A6J1H8Q5 cationic amino acid transporter 6, chloroplastic-like2.6e-5794.49Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMT+TRSTSGV M RTLRWFDLVGFGLGGM+GAGVFVTTGPA  QAGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLR+TFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

A0A6J1JUB5 cationic amino acid transporter 6, chloroplastic-like4.5e-5794.49Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHS+SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMT+TRSTSGV M RTLRWFDLVGFGLGGMIGAGVFVTTGPA  QAGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLR+TFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

A0A6J1K008 cationic amino acid transporter 6, chloroplastic-like1.5e-5796.06Show/hide
Query:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL
        MDAHSSSFSSFSAYLRALSL PSRLSRRAFSVSTSFDEMT+TR TSGV MQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ+AGPAIVLSYAIAGLCALL
Subjt:  MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALL

Query:  SAFCYTEFAVDMPVAGGAFSYLRVTFG
        SAFCYTEFAVDMPVAGGAFSYLRVTFG
Subjt:  SAFCYTEFAVDMPVAGGAFSYLRVTFG

SwissProt top hitse value%identityAlignment
O64759 Cationic amino acid transporter 58.0e-2755.74Show/hide
Query:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY
        SF SF +Y  ALS T SR   R  S S   +E    +  S  +M+R L W+DLV FG G +IGAG+FV TG  A +QAGPAIVLSY ++GL A+LS FCY
Subjt:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY

Query:  TEFAVDMPVAGGAFSYLRVTFG
        TEFAV++PVAGG+F+YLR+  G
Subjt:  TEFAVDMPVAGGAFSYLRVTFG

Q84MA5 Cationic amino acid transporter 11.6e-2752.46Show/hide
Query:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY
        SF S   YL+AL  TPSR   R  + S   DE+   ++ SG +M++TL W+DL+ FG+G +IG+G+FV TG  A   +GPA+VLSY ++G+ A+LS FCY
Subjt:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY

Query:  TEFAVDMPVAGGAFSYLRVTFG
        TEFAV++PVAGG+F+YLRV  G
Subjt:  TEFAVDMPVAGGAFSYLRVTFG

Q9LZ20 Cationic amino acid transporter 6, chloroplastic6.1e-4373.98Show/hide
Query:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC
        SSFSS   YL +LS TPSRLSRRA SVSTS DEM+  R+ SG  M+RTLRW+DL+G G+GGM+GAGVFVTTG A++  AGP+IV+SYAIAGLCALLSAFC
Subjt:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC

Query:  YTEFAVDMPVAGGAFSYLRVTFG
        YTEFAV +PVAGGAFSY+R+TFG
Subjt:  YTEFAVDMPVAGGAFSYLRVTFG

Q9SHH0 Cationic amino acid transporter 8, vacuolar1.8e-2353.28Show/hide
Query:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY
        SF SFS Y  ALS T  RL+ R  S S+   E+   R  S   M+R L W+DL+    G ++G+GVFV TG  A   AGPA+VLSYAI+G+ ALLS  CY
Subjt:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY

Query:  TEFAVDMPVAGGAFSYLRVTFG
         EF V++PVAGG+FSYLRV  G
Subjt:  TEFAVDMPVAGGAFSYLRVTFG

Q9SQZ0 Cationic amino acid transporter 7, chloroplastic3.0e-4273.17Show/hide
Query:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC
        +SFSS   YL +LS TPSR SRRA SVSTS+DEM+  R+ SG  M+RTLRW+DL+G G+GGMIGAGVFVTTG A++  AGP+IV+SYAIAGLCALLSAFC
Subjt:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC

Query:  YTEFAVDMPVAGGAFSYLRVTFG
        YTEFAV +PVAGGAFSY+R+TFG
Subjt:  YTEFAVDMPVAGGAFSYLRVTFG

Arabidopsis top hitse value%identityAlignment
AT1G17120.1 cationic amino acid transporter 81.3e-2453.28Show/hide
Query:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY
        SF SFS Y  ALS T  RL+ R  S S+   E+   R  S   M+R L W+DL+    G ++G+GVFV TG  A   AGPA+VLSYAI+G+ ALLS  CY
Subjt:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY

Query:  TEFAVDMPVAGGAFSYLRVTFG
         EF V++PVAGG+FSYLRV  G
Subjt:  TEFAVDMPVAGGAFSYLRVTFG

AT2G34960.1 cationic amino acid transporter 55.7e-2855.74Show/hide
Query:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY
        SF SF +Y  ALS T SR   R  S S   +E    +  S  +M+R L W+DLV FG G +IGAG+FV TG  A +QAGPAIVLSY ++GL A+LS FCY
Subjt:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY

Query:  TEFAVDMPVAGGAFSYLRVTFG
        TEFAV++PVAGG+F+YLR+  G
Subjt:  TEFAVDMPVAGGAFSYLRVTFG

AT3G10600.1 cationic amino acid transporter 72.1e-4373.17Show/hide
Query:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC
        +SFSS   YL +LS TPSR SRRA SVSTS+DEM+  R+ SG  M+RTLRW+DL+G G+GGMIGAGVFVTTG A++  AGP+IV+SYAIAGLCALLSAFC
Subjt:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC

Query:  YTEFAVDMPVAGGAFSYLRVTFG
        YTEFAV +PVAGGAFSY+R+TFG
Subjt:  YTEFAVDMPVAGGAFSYLRVTFG

AT4G21120.1 amino acid transporter 11.1e-2852.46Show/hide
Query:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY
        SF S   YL+AL  TPSR   R  + S   DE+   ++ SG +M++TL W+DL+ FG+G +IG+G+FV TG  A   +GPA+VLSY ++G+ A+LS FCY
Subjt:  SFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTG-PATQQAGPAIVLSYAIAGLCALLSAFCY

Query:  TEFAVDMPVAGGAFSYLRVTFG
        TEFAV++PVAGG+F+YLRV  G
Subjt:  TEFAVDMPVAGGAFSYLRVTFG

AT5G04770.1 cationic amino acid transporter 64.3e-4473.98Show/hide
Query:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC
        SSFSS   YL +LS TPSRLSRRA SVSTS DEM+  R+ SG  M+RTLRW+DL+G G+GGM+GAGVFVTTG A++  AGP+IV+SYAIAGLCALLSAFC
Subjt:  SSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQ-QAGPAIVLSYAIAGLCALLSAFC

Query:  YTEFAVDMPVAGGAFSYLRVTFG
        YTEFAV +PVAGGAFSY+R+TFG
Subjt:  YTEFAVDMPVAGGAFSYLRVTFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCCATTCCTCTTCCTTTTCAAGCTTTTCCGCCTACCTTCGAGCTCTCTCTCTAACCCCTTCTCGTCTTTCTCGCCGGGCTTTCTCTGTTTCCACCTCTTTCGA
TGAAATGACCACTACTCGATCCACTTCCGGCGTCGACATGCAGAGGACTCTCCGCTGGTTCGACCTCGTCGGTTTTGGCCTCGGTGGGATGATCGGTGCGGGGGTTTTCG
TCACCACCGGTCCGGCTACACAGCAAGCTGGACCCGCCATTGTTCTCTCTTACGCCATTGCTGGCCTCTGTGCGCTTTTATCGGCGTTCTGCTACACTGAGTTCGCCGTC
GATATGCCTGTTGCTGGTGGGGCCTTCAGTTACCTCCGTGTCACATTCGGTGTGGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCCATTCCTCTTCCTTTTCAAGCTTTTCCGCCTACCTTCGAGCTCTCTCTCTAACCCCTTCTCGTCTTTCTCGCCGGGCTTTCTCTGTTTCCACCTCTTTCGA
TGAAATGACCACTACTCGATCCACTTCCGGCGTCGACATGCAGAGGACTCTCCGCTGGTTCGACCTCGTCGGTTTTGGCCTCGGTGGGATGATCGGTGCGGGGGTTTTCG
TCACCACCGGTCCGGCTACACAGCAAGCTGGACCCGCCATTGTTCTCTCTTACGCCATTGCTGGCCTCTGTGCGCTTTTATCGGCGTTCTGCTACACTGAGTTCGCCGTC
GATATGCCTGTTGCTGGTGGGGCCTTCAGTTACCTCCGTGTCACATTCGGTGTGGTTTCTTGA
Protein sequenceShow/hide protein sequence
MDAHSSSFSSFSAYLRALSLTPSRLSRRAFSVSTSFDEMTTTRSTSGVDMQRTLRWFDLVGFGLGGMIGAGVFVTTGPATQQAGPAIVLSYAIAGLCALLSAFCYTEFAV
DMPVAGGAFSYLRVTFGVVS