; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G006600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G006600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRRM domain-containing protein
Genome locationchr08:14945716..14948388
RNA-Seq ExpressionLsi08G006600
SyntenyLsi08G006600
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032950.1 MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-9680.51Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL+KA SL S+KKESADFL       F++ F+S L S  L++             S+F+PLEGGPGRKLPAQKPLESTATVLYI RIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EF+SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

TYK11746.1 putative RNA-binding protein [Cucumis melo var. makuwa]9.5e-11375.68Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL KA  LSSDKKESADFL                                        PLEGGPGRKLP QKPLESTATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIGLALRALNSILTVGPLHFFIISIRWVVSNQLPRRSSSMKIRMRVQFIESYNIITPEEEGG
        RTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEI                 F   S +WVVSNQLPRRSSSMKIR+ VQFI SYNIITPEE GG
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIGLALRALNSILTVGPLHFFIISIRWVVSNQLPRRSSSMKIRMRVQFIESYNIITPEEEGG

XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]2.8e-9680.51Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL KA  LSSDKKESADFL                                        PLEGGPGRKLP QKPLESTATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]5.8e-9477.54Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL+KA S  SDKKESADFL                                        PLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTLDEHKKLV+RILKRDQAR+KRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]2.8e-9679.66Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL+KA SLS  K+ESADFL                                        PLEGGPGRKLPAQKPLESTATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTLDEHKKLVDRI+KRDQARQKRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein2.8e-9478.39Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKA+KAMKKKLNKA  LSSDKKESADFL                                        PLEGGPGRKL  QKPLESTATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKS+HFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTL+EHKKLVDRILKRDQARQKRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c1.3e-9680.51Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL KA  LSSDKKESADFL                                        PLEGGPGRKLP QKPLESTATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

A0A5D3CMU5 Putative RNA-binding protein4.6e-11375.68Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL KA  LSSDKKESADFL                                        PLEGGPGRKLP QKPLESTATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIGLALRALNSILTVGPLHFFIISIRWVVSNQLPRRSSSMKIRMRVQFIESYNIITPEEEGG
        RTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEI                 F   S +WVVSNQLPRRSSSMKIR+ VQFI SYNIITPEE GG
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIGLALRALNSILTVGPLHFFIISIRWVVSNQLPRRSSSMKIRMRVQFIESYNIITPEEEGG

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like1.4e-9377.54Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKLNKA SL S+KKESADFL                                        PLEGGPGRKLPAQKPLESTATVLYI RIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EF+SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like2.8e-9477.54Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH
        MGAKAKKAMKKKL+KA S  SDKKESADFL                                        PLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPH

Query:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE
        GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERKQHNKE
Subjt:  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKE

Query:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        RTLDEHKKLV+RILKRDQAR+KRIRAAGIDYECPEI
Subjt:  RTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c1.8e-2940Show/hide
Query:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RNRKTG S+H+ ++EFES +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYE
        KG +     +  + + R QH K  + ++  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein1.2e-2537.5Show/hide
Query:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        R    Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R++KTG S+ +G+VEFES +VAKI A++M+NYL  E +LK H I PE VH +L+
Subjt:  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHTPLNWSELER-KQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        + +   H P         K++N+ R+L +  ++ +R  K+++  +KR+   GIDY  P +
Subjt:  KGFNYRHTPLNWSELER-KQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.2e-2744Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R++KTG S+ + YVEFE  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   +        
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIGLALR
        + R  +NK R+  E KK+  R+L ++   +KR+   GIDY+ P  G A R
Subjt:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEIGLALR

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like1.7e-2743.15Show/hide
Query:  TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLN
        T  V+YIG IP    E +++ +F QFG V RLR++R++KTG S+ + YVE+E  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G N R     
Subjt:  TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLN

Query:  WSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP
           + R  +N +R  +E KK+  R++ ++   +KR+   GIDY+ P
Subjt:  WSELERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein6.7e-2946.15Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE
        VLY+G +P G FE +++ +F QFGKV RLR++R++KTG S+ +G+VEFE  EVAKIVA++M+NYL+ E I+K H+I PE VH KL+ G         +  
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSE

Query:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP
        + R  +NK  T D+ KK+  ++L ++   +KR+ A GIDY+ P
Subjt:  LERKQHNKERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECP

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-0737.68Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-0737.68Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHN

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-0729.09Show/hide
Query:  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG++ F  P VA+ V    H                   +L  H 
Subjt:  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIAPEH
          +HLI+P H
Subjt:  LKVHLIAPEH

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-0628.7Show/hide
Query:  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHILK
        ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG++ F  P VA+ V    H                   +L  H   
Subjt:  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHILK

Query:  VHLIAPEH
        +HLI+P H
Subjt:  VHLIAPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-6050.63Show/hide
Query:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLP-AQKPLESTATVLYIGRIP
        MGAKAKKA+KK + K  + +S  +        +P      P                        S+ F PLEGGP RK P    PL++ ATVLYIGRIP
Subjt:  MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLP-AQKPLESTATVLYIGRIP

Query:  HGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNK
        HGF+E E+E FF QFG VKR+R+ARN+KTGKS+HFG+++FE PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF     P++  ++ER+Q NK
Subjt:  HGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNK

Query:  ERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI
        ERTL+EH+K++ +I+K+DQ R+KRI AAGI+YECPE+
Subjt:  ERTLDEHKKLVDRILKRDQARQKRIRAAGIDYECPEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAACAAGGCTATTTCTCTCTCATCCGACAAGAAGGAATCTGCCGATTTCTTGGTATGTATGCCCTTCACTCT
GTTCATCAATCCCTTCGTCTCGGATCTTTTTAGTTGTTGTTTGGTTATTCTATCTCTTAATCTCTCTAGGTTTCTATGTAATTATTCCTCTCTCTTTCAGCCGTTGGAGG
GTGGTCCTGGGCGTAAGTTACCGGCACAGAAGCCACTGGAAAGTACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGTTTT
TTCGGACAGTTTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAGAAAGACCGGGAAGTCGAGGCATTTTGGCTACGTTGAATTTGAATCCCCAGAGGTAGCAAAAAT
TGTAGCTGATTCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATGTTCACCCCAAACTATGGAAAGGTTTTAACTATCGCC
ACACGCCCTTAAATTGGTCTGAACTCGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGATGAGCACAAGAAGTTGGTGGACAGAATCTTGAAGCGGGATCAGGCGAGA
CAGAAGAGGATAAGAGCTGCTGGGATTGATTATGAGTGTCCGGAAATTGGACTAGCCCTGAGAGCTCTCAACAGTATCCTCACAGTTGGCCCACTACACTTTTTCATTAT
CTCCATACGGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTCGATGAAGATTAGAATGAGGGTTCAGTTCATAGAAAGCTATAATATTATCACACCAGAGGAAG
AAGGGGGTTATCATGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAACAAGGCTATTTCTCTCTCATCCGACAAGAAGGAATCTGCCGATTTCTTGGTATGTATGCCCTTCACTCT
GTTCATCAATCCCTTCGTCTCGGATCTTTTTAGTTGTTGTTTGGTTATTCTATCTCTTAATCTCTCTAGGTTTCTATGTAATTATTCCTCTCTCTTTCAGCCGTTGGAGG
GTGGTCCTGGGCGTAAGTTACCGGCACAGAAGCCACTGGAAAGTACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGTTTT
TTCGGACAGTTTGGGAAAGTCAAAAGATTAAGAATTGCACGAAATAGAAAGACCGGGAAGTCGAGGCATTTTGGCTACGTTGAATTTGAATCCCCAGAGGTAGCAAAAAT
TGTAGCTGATTCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGCTCCCGAGCATGTTCACCCCAAACTATGGAAAGGTTTTAACTATCGCC
ACACGCCCTTAAATTGGTCTGAACTCGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGATGAGCACAAGAAGTTGGTGGACAGAATCTTGAAGCGGGATCAGGCGAGA
CAGAAGAGGATAAGAGCTGCTGGGATTGATTATGAGTGTCCGGAAATTGGACTAGCCCTGAGAGCTCTCAACAGTATCCTCACAGTTGGCCCACTACACTTTTTCATTAT
CTCCATACGGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTCGATGAAGATTAGAATGAGGGTTCAGTTCATAGAAAGCTATAATATTATCACACCAGAGGAAG
AAGGGGGTTATCATGAAGAGTGATGAGCCCTTTCTGTCTTTTCAGTTTCTTATGCTGGAGGGGTAAACTTCCCAATATCCTTGAATCTCCAAATTTTGATCTGTGAAATT
TTGTGTCAAAACATATTTTTATGCTCTTTAGTAGTATGTATTCCCTTTTATAAAAATGAAAAAAAAAAGAGATTATATTGAAGCTTTTATGGCTTAGAATTCTGACTTTC
TCTCAAGGATGAGAAAACTGAATGGTAAATTTGATAGTTCTACCATGTCAGATCTACATGTATAGTTTATATTATGTTTGTTTCAGTTTCATCCATCTAATTCTTAATTG
GCTTCATATTTAGATGGAAAGTAGTTTAGATTGGATCCCCAACACTTACAGTTTGAATTGTTCCTATGTTGTCATGGATGTTATTTTTGGTCTTATATACTCTTCTTAAA
AATGAAATTTTGATAATGATTTTGTT
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLNKAISLSSDKKESADFLVCMPFTLFINPFVSDLFSCCLVILSLNLSRFLCNYSSLFQPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGF
FGQFGKVKRLRIARNRKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRILKRDQAR
QKRIRAAGIDYECPEIGLALRALNSILTVGPLHFFIISIRWVVSNQLPRRSSSMKIRMRVQFIESYNIITPEEEGGYHEE