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Lsi08G006640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G006640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal protein S14
Genome locationchr08:14970164..14970469
RNA-Seq ExpressionLsi08G006640
SyntenyLsi08G006640
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001209 - Ribosomal protein S14
IPR018271 - Ribosomal protein S14, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032953.1 Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-4591.09Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        M+ DKRNILDH+RR+LAAKFELKRKL+KA+CNDPSLPNDVREE RYKLSKLPRNSSFTRLRNRCIFTGRPR VYQLFRVSRIVFRDLA+KGLIMGVKKSS
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

XP_022134507.1 uncharacterized protein LOC111006733 [Momordica charantia]1.4e-4795.05Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        MSGDKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPR+VYQLFRVSRIVFRDLA+KGLIMGVKKSS
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

XP_022938933.1 uncharacterized protein LOC111444996 [Cucurbita moschata]1.3e-4592.08Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        M+ DKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREE RYKLSKLPRNSSFTRLRNRCIFTGRPR VYQLFRVSRIVFRDLA+KGLIMGVKKSS
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

XP_023550870.1 uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo]1.7e-4591.09Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        M+ DKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREE RYKLSKLPRNSSFTRLRNRCIFTGRPR VYQLFRVSRIVFRDLA+KGL+MGVKKSS
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

XP_038884392.1 ribosomal protein S14, mitochondrial [Benincasa hispida]1.7e-4592.08Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        MS DKRNILDH+RR+LAAKFE+KRKLYKAICNDPSLPNDVRE+ RYKLSKLPRNSSFTRLRNRCIFTGRPR+VYQLFRVSRIVFRDLA+KGLIMGVKKSS
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

TrEMBL top hitse value%identityAlignment
A0A0A0LSR8 Uncharacterized protein4.1e-4285.15Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        MSGDKRNILD++RR+LAAKFELKR L+KAICNDPSLP D+REE R KLSKLPRNSSFTRLRNRCIFTGRPR VYQLFR+SRIVFR+LA KGL+MGVKK+S
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

A0A1S4E169 ribosomal protein S14, mitochondrial6.4e-4386.14Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        MSGDKRNILD++RR+LAAKFE+KR L+KAICNDPSLP DVREE RYKLSKLPRNSSFTRLRNRCIFTGRPR VYQLFR+SRIVFR+LA KGL+MGVKK+S
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

A0A5D3CKB3 Ribosomal protein S146.4e-4386.14Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        MSGDKRNILD++RR+LAAKFE+KR L+KAICNDPSLP DVREE RYKLSKLPRNSSFTRLRNRCIFTGRPR VYQLFR+SRIVFR+LA KGL+MGVKK+S
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

A0A6J1C264 uncharacterized protein LOC1110067336.6e-4895.05Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        MSGDKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPR+VYQLFRVSRIVFRDLA+KGLIMGVKKSS
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

A0A6J1FKA4 uncharacterized protein LOC1114449966.2e-4692.08Show/hide
Query:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS
        M+ DKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREE RYKLSKLPRNSSFTRLRNRCIFTGRPR VYQLFRVSRIVFRDLA+KGLIMGVKKSS
Subjt:  MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSS

Query:  W
        W
Subjt:  W

SwissProt top hitse value%identityAlignment
P05716 Ribosomal protein S14, mitochondrial2.5e-3673.47Show/hide
Query:  DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW
        +KRNI DH RR LAAK+EL+RKLYKA C D  LP+D+R++ RYKLSKLPRNSSF R+RNRCI TGRPRSVY+LFR+SRIVFR LA++G +MG+KKSSW
Subjt:  DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW

P14875 Ribosomal protein S14, mitochondrial3.0e-3773.47Show/hide
Query:  DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW
        +KRNI DH RR LA K+EL+RKLYKA CNDP+LP+D+R++ RYKLSKLPRNSSF R+RNRCI TGRPRSVY+ FR+SRIVFR LA++G +MG+KKSSW
Subjt:  DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW

P26873 Ribosomal protein S14, mitochondrial2.4e-3170.21Show/hide
Query:  ILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW
        I DH RR L AK+ELKR  YKAIC D +LPN +R E  +KLSKLPRNSS TR+RNRCIFTGRPRSVY+LFR+SRIVFR+LA+KG ++G+ KS W
Subjt:  ILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW

P46752 Ribosomal protein S14, mitochondrial2.5e-2058.43Show/hide
Query:  RRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW
        RR+L  K+E KR LYKA+ +D +L  D+R     KL+KLPRNSS  R++NRCI TGR  SVY+  R+SRI FRDLA +GLI G  KSSW
Subjt:  RRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW

P49387 Ribosomal protein S14, mitochondrial1.8e-3470.41Show/hide
Query:  DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW
        +K+N  DH RR LAAKFEL+RKLYKA C DP LP+D+R++ RYKLSKLPRNSSF R+RNRCI TGRPRSV + FR+ RIVFR LA++G +MG+KKSSW
Subjt:  DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW

Arabidopsis top hitse value%identityAlignment
AT2G34520.1 mitochondrial ribosomal protein S143.4e-3670.71Show/hide
Query:  GDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW
        G KRN  DH RR LAA+FEL+RKLYKA C DP LP+++R++ RYKLSKLPRNS+F R+RNRC+FTGR RSV +LFRVSRIVFR LA+KG +MG+ KSSW
Subjt:  GDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW

ATCG00330.1 chloroplast ribosomal protein S146.6e-0838.89Show/hide
Query:  RRELAAKFEL-KRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW
        R++L  K+ L +R   K I   PSL    + +   KL   PRNS+ TRL  RC  TGRPR+ Y+ F +S  + R++    L+ G  +SSW
Subjt:  RRELAAKFEL-KRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGGACAAGCGAAACATTCTTGATCATTTTCGCCGAGAGCTTGCTGCAAAGTTTGAGTTGAAGCGGAAGCTTTACAAAGCCATTTGCAACGATCCGAGTCTTCC
TAACGATGTGCGTGAGGAGCAGCGTTATAAGCTGTCGAAATTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGTCTGTCT
ACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGCGATCTGGCGACCAAAGGTCTTATAATGGGTGTCAAGAAATCTTCTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGGGACAAGCGAAACATTCTTGATCATTTTCGCCGAGAGCTTGCTGCAAAGTTTGAGTTGAAGCGGAAGCTTTACAAAGCCATTTGCAACGATCCGAGTCTTCC
TAACGATGTGCGTGAGGAGCAGCGTTATAAGCTGTCGAAATTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGTCTGTCT
ACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGCGATCTGGCGACCAAAGGTCTTATAATGGGTGTCAAGAAATCTTCTTGGTAG
Protein sequenceShow/hide protein sequence
MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW