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Lsi08G006940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G006940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4050 domain-containing protein
Genome locationchr08:15253644..15257958
RNA-Seq ExpressionLsi08G006940
SyntenyLsi08G006940
Gene Ontology termsNA
InterPro domainsIPR025124 - Domain of unknown function DUF4050


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578803.1 hypothetical protein SDJN03_23251, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4583.61Show/hide
Query:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE
        RGR ESISSEK+EM+K+ S +KEK T+GRSS SSEVKKPAE++LSSSTF+N+AAI WHESRKKWVD + SQQQQRMER+SIISWSTAYEDLLST EPFSE
Subjt:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE

Query:  PIPLPEMVDFLVDIWHDEGLFD
        PIPLPEMVDFLVDIWHDEGLFD
Subjt:  PIPLPEMVDFLVDIWHDEGLFD

XP_022134091.1 uncharacterized protein LOC111006447 [Momordica charantia]6.8e-4782.5Show/hide
Query:  GRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPI
        GR ESISS+K+EM+K  S SKEKP  G  S+SSEVKKPAE+DLSSSTF+N+AAI WHESRKKW+++ SQQQQRMERESIISWSTAYEDLLSTNEPFSEPI
Subjt:  GRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPI

Query:  PLPEMVDFLVDIWHDEGLFD
        PLPEMVDFLVDIWHD+GLFD
Subjt:  PLPEMVDFLVDIWHDEGLFD

XP_022938467.1 uncharacterized protein LOC111444696 isoform X1 [Cucurbita moschata]9.8e-4683.61Show/hide
Query:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE
        RGR ESISSEK+EM+K+ S +KEK T+GRSS SSEV+KPAE+DLSSSTF+N+AAI WHESRKKWVD + SQQQQRMER+SIISWSTAYEDLLST EPFSE
Subjt:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE

Query:  PIPLPEMVDFLVDIWHDEGLFD
        PIPLPEMVDFLVDIWHDEGLFD
Subjt:  PIPLPEMVDFLVDIWHDEGLFD

XP_022993761.1 uncharacterized protein LOC111489671 [Cucurbita maxima]4.4e-4683.74Show/hide
Query:  LRGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFS
        LRGR ESISSEK+EM+K+ S +KEK T+GRSS SSEVKKPAE++LSSSTF+N+AAI WHESRKKWVD + SQQQQRMER+SIISWSTAYEDLLST EPFS
Subjt:  LRGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFS

Query:  EPIPLPEMVDFLVDIWHDEGLFD
        EPIPLPEMVDFLVDIWHDEGLFD
Subjt:  EPIPLPEMVDFLVDIWHDEGLFD

XP_023549670.1 uncharacterized protein LOC111808097 isoform X1 [Cucurbita pepo subsp. pepo]1.3e-4583.61Show/hide
Query:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE
        RGR ESISSEK+EM+K+ S +KEK T+GRSS SSEVKKPAE++LSSSTF+N+AAI WHESRKKWVD + SQQQQRMER+SIISWSTAYEDLLST EPFSE
Subjt:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE

Query:  PIPLPEMVDFLVDIWHDEGLFD
        PIPLPEMVDFLVDIWHDEGLFD
Subjt:  PIPLPEMVDFLVDIWHDEGLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LK63 Uncharacterized protein1.2e-4990.91Show/hide
Query:  MEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLV
        MEMNKK S SKEKPTMGRSS+SSEVKKPAE+DLSS TF+N+AAICWHESRKKWVD+NSQQQQRMERES+ISWSTAYEDLLSTN+PFSEPIPLPEMVDFLV
Subjt:  MEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLV

Query:  DIWHDEGLFD
        DIWHDEGLFD
Subjt:  DIWHDEGLFD

A0A6J1BWZ9 uncharacterized protein LOC1110064473.3e-4782.5Show/hide
Query:  GRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPI
        GR ESISS+K+EM+K  S SKEKP  G  S+SSEVKKPAE+DLSSSTF+N+AAI WHESRKKW+++ SQQQQRMERESIISWSTAYEDLLSTNEPFSEPI
Subjt:  GRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPI

Query:  PLPEMVDFLVDIWHDEGLFD
        PLPEMVDFLVDIWHD+GLFD
Subjt:  PLPEMVDFLVDIWHDEGLFD

A0A6J1FE43 uncharacterized protein LOC111444696 isoform X14.7e-4683.61Show/hide
Query:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE
        RGR ESISSEK+EM+K+ S +KEK T+GRSS SSEV+KPAE+DLSSSTF+N+AAI WHESRKKWVD + SQQQQRMER+SIISWSTAYEDLLST EPFSE
Subjt:  RGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFSE

Query:  PIPLPEMVDFLVDIWHDEGLFD
        PIPLPEMVDFLVDIWHDEGLFD
Subjt:  PIPLPEMVDFLVDIWHDEGLFD

A0A6J1H099 uncharacterized protein LOC111458848 isoform X11.8e-4580.49Show/hide
Query:  SLRGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFS
        +LRG  E ISSE MEMNK  S SKEKP+MGRSS SSEVKKP+E+DLSSSTF+N+AAI WHESRKKW+D+    QQRME+ES+ISWSTAYEDLLS+NEPFS
Subjt:  SLRGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFS

Query:  EPIPLPEMVDFLVDIWHDEGLFD
        EPIPLPEMVDFLVDIWHDEGLFD
Subjt:  EPIPLPEMVDFLVDIWHDEGLFD

A0A6J1JX88 uncharacterized protein LOC1114896712.1e-4683.74Show/hide
Query:  LRGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFS
        LRGR ESISSEK+EM+K+ S +KEK T+GRSS SSEVKKPAE++LSSSTF+N+AAI WHESRKKWVD + SQQQQRMER+SIISWSTAYEDLLST EPFS
Subjt:  LRGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVD-QNSQQQQRMERESIISWSTAYEDLLSTNEPFS

Query:  EPIPLPEMVDFLVDIWHDEGLFD
        EPIPLPEMVDFLVDIWHDEGLFD
Subjt:  EPIPLPEMVDFLVDIWHDEGLFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54880.1 unknown protein6.6e-2451.96Show/hide
Query:  SKEKPTMGRSSASSEVKKPAERDLSSS-TFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLVDIWHDEGL
        ++ KPT+  S    + K   + +  ++ T +N  A  W E+R+KWV   S+Q++   ++ IISWST YEDLLST+EPFSE IPLPEMVDFLVDIW+DEGL
Subjt:  SKEKPTMGRSSASSEVKKPAERDLSSS-TFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLVDIWHDEGL

Query:  FD
        +D
Subjt:  FD

AT5G03440.1 unknown protein1.4e-1844.12Show/hide
Query:  QSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLVDIWHDEGL
        ++ ++P    S++S++ +K +E       F+N A I W E RKKWV   S +   M  E +I ++  YEDLL++N PF++PIPL EMVDFL DIWH +GL
Subjt:  QSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLVDIWHDEGL

Query:  FD
        F+
Subjt:  FD

AT5G03440.2 unknown protein1.4e-1844.12Show/hide
Query:  QSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLVDIWHDEGL
        ++ ++P    S++S++ +K +E       F+N A I W E RKKWV   S +   M  E +I ++  YEDLL++N PF++PIPL EMVDFL DIWH +GL
Subjt:  QSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEMVDFLVDIWHDEGL

Query:  FD
        F+
Subjt:  FD

AT5G25360.1 unknown protein3.9e-1638.14Show/hide
Query:  SSEKMEMNKKGSQSKEKPT----MGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPL
        S+   EM+    QS+   +       +S S+    P E       F+N     W+++R++W+   + Q++   RE  ISW+  YE LL  N+ FS PIPL
Subjt:  SSEKMEMNKKGSQSKEKPT----MGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPL

Query:  PEMVDFLVDIWHDEGLFD
        PEMVDFLVD+W  EGL+D
Subjt:  PEMVDFLVDIWHDEGLFD

AT5G25360.2 unknown protein3.9e-1638.14Show/hide
Query:  SSEKMEMNKKGSQSKEKPT----MGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPL
        S+   EM+    QS+   +       +S S+    P E       F+N     W+++R++W+   + Q++   RE  ISW+  YE LL  N+ FS PIPL
Subjt:  SSEKMEMNKKGSQSKEKPT----MGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPL

Query:  PEMVDFLVDIWHDEGLFD
        PEMVDFLVD+W  EGL+D
Subjt:  PEMVDFLVDIWHDEGLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCACGGTTCTTGATTTGAAAGTTTCTCTTAGAGGAAGGATTGAGTCTATTAGTTCAGAGAAGATGGAGATGAATAAAAAAGGTTCCCAATCAAAAGAGAAACCGAC
TATGGGCCGTTCTTCAGCTTCTAGTGAAGTGAAAAAGCCTGCGGAAAGAGACTTAAGCTCCTCTACGTTTATTAATGAGGCTGCAATTTGTTGGCACGAGAGTAGAAAGA
AGTGGGTCGATCAAAATTCTCAACAACAACAAAGAATGGAAAGGGAATCAATCATAAGCTGGTCAACAGCATATGAAGATCTACTCTCCACTAACGAGCCCTTCAGTGAG
CCAATTCCTCTTCCTGAGATGGTAGATTTCTTGGTTGATATTTGGCATGATGAAGGGCTTTTCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCACGGTTCTTGATTTGAAAGTTTCTCTTAGAGGAAGGATTGAGTCTATTAGTTCAGAGAAGATGGAGATGAATAAAAAAGGTTCCCAATCAAAAGAGAAACCGAC
TATGGGCCGTTCTTCAGCTTCTAGTGAAGTGAAAAAGCCTGCGGAAAGAGACTTAAGCTCCTCTACGTTTATTAATGAGGCTGCAATTTGTTGGCACGAGAGTAGAAAGA
AGTGGGTCGATCAAAATTCTCAACAACAACAAAGAATGGAAAGGGAATCAATCATAAGCTGGTCAACAGCATATGAAGATCTACTCTCCACTAACGAGCCCTTCAGTGAG
CCAATTCCTCTTCCTGAGATGGTAGATTTCTTGGTTGATATTTGGCATGATGAAGGGCTTTTCGATTAG
Protein sequenceShow/hide protein sequence
MFTVLDLKVSLRGRIESISSEKMEMNKKGSQSKEKPTMGRSSASSEVKKPAERDLSSSTFINEAAICWHESRKKWVDQNSQQQQRMERESIISWSTAYEDLLSTNEPFSE
PIPLPEMVDFLVDIWHDEGLFD