CuGenDBv2

Gene ID	Lsi08G007030
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Sorting and assembly machinery component 50-like protein
Genome location	chr08:15337024..15337623
RNA-Seq Expression	Lsi08G007030
Synteny	Lsi08G007030
Gene Ontology terms	GO:0045040 - protein insertion into mitochondrial outer membrane (biological process) GO:0001401 - SAM complex (cellular component) GO:0009527 - plastid outer membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010827 - POTRA domain, BamA/TamA-like IPR034746 - POTRA domain IPR039910 - Surface antigen D15-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036493.1 sorting and assembly machinery component 50-like protein [Cucumis melo var. makuwa]

1.7e-73

90.27

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MANSEEVGKSSI     EE+ ER+PSNFENGDGE    DEDVEDEEEDEE ED NDEEPP+ KP++DASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

KAG6578810.1 Sorting and assembly machinery component 50-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-71

87.17

Show/hide

Query:  MANSEEVGKSSIGLNS--EEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDIL
        M NSEEVGK++I  +S  EEE+ EREPSNFENGDGEDE+  ED E++EEDE+DEDD++EEPPRRKPI DASRL+AQRSKLENLVERMRKEKVRLRVHD+L
Subjt:  MANSEEVGKSSIGLNS--EEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDIL

Query:  IKGNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        IKGN+KTKDSLIEAEVEAIKNASTMQELLEAAGVANA LQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  IKGNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

XP_004140074.1 sorting and assembly machinery component 50 homolog [Cucumis sativus]

2.0e-71

89.19

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MANSEEVGKSSI     EE+ EREPSNFENGDGE    DEDVED+EEDEE ED NDEE P+ KP++DASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        GNTKTKDSLIEAEVEAIK ASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

XP_008456518.1 PREDICTED: LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homolog [Cucumis melo]

1.7e-73

90.27

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MANSEEVGKSSI     EE+ ER+PSNFENGDGE    DEDVEDEEEDEE ED NDEEPP+ KP++DASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

XP_038885406.1 sorting and assembly machinery component 50 homolog [Benincasa hispida]

6.1e-84

98.92

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MANSEEVG SSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEE PRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KE64 Uncharacterized protein

9.9e-72

89.19

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MANSEEVGKSSI     EE+ EREPSNFENGDGE    DEDVED+EEDEE ED NDEE P+ KP++DASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        GNTKTKDSLIEAEVEAIK ASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

A0A1S3C310 LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homolog

8.1e-74

90.27

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MANSEEVGKSSI     EE+ ER+PSNFENGDGE    DEDVEDEEEDEE ED NDEEPP+ KP++DASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

A0A5A7T0T1 Sorting and assembly machinery component 50-like protein

8.1e-74

90.27

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MANSEEVGKSSI     EE+ ER+PSNFENGDGE    DEDVEDEEEDEE ED NDEEPP+ KP++DASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

A0A6J1FH45 sorting and assembly machinery component 50 homolog B-like

1.4e-70

86.63

Show/hide

Query:  MANSEEVGKSSIGLNS--EEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDIL
        M NSEEVGK++I  +S  EEE+ EREPSNFENGD EDE+  ED E++EEDE+DEDD++EEPPRRKPI DASRL+AQRSKLENLVERMRKEKVRLRVHDIL
Subjt:  MANSEEVGKSSIGLNS--EEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDIL

Query:  IKGNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        IKGN+KTKDSLIEAEVEAIKNASTMQELLEAAGVANA LQRLEIFDSVKITLDSGPPELPGTANVVIEVVE GNPLSGECGAYTKPA
Subjt:  IKGNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

A0A6J1K1Q1 sorting and assembly machinery component 50 homolog B-like

6.4e-71

86.63

Show/hide

Query:  MANSEEVGKSSIGLNS--EEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDIL
        M +SEEVG+++I  +S  EEE+ EREPSNFENGDGEDE+  ED E++EEDE+DEDD+DEEPPRRKPI DASRL+AQRSKLENLVERMRKEKVRLRVHDIL
Subjt:  MANSEEVGKSSIGLNS--EEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDIL

Query:  IKGNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA
        IKGN+KTKDSLIEAEVEAIKNASTMQELLEAAGVANA LQRLEIFDSVKITLDSGPPELPGTANVVIEVVE GNPLSGECGAYTKPA
Subjt:  IKGNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G11070.1 Outer membrane OMP85 family protein

3.5e-29

47.12

Show/hide

Query:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK
        MAN  E    ++  N +  + E E    E    E +DG ED      D+ ++DD + +   R+  S   R+     K E+L  RMR   V +RVHD++I 
Subjt:  MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIK

Query:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPAVGFCSV
        GN KTKD +IEAEV+A++ A+T+QELLEA+ VAN+ L+ L+IFDSV ITLDSGPPELPGT NVVI+VVE+ +PL+G+ GAYT+      SV
Subjt:  GNTKTKDSLIEAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPAVGFCSV

AT5G05520.1 Outer membrane OMP85 family protein

5.4e-30

51.74

Show/hide

Query:  LNSEEEQAEREPS--NFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLIE
        + +  E+ +  PS    E+ D  +E GD +  DEEE+EE E+++D +P  R+   DA   +A R K E+L  RMR   V +RVHD+++KGN KTKD +IE
Subjt:  LNSEEEQAEREPS--NFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLIE

Query:  AEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTK
        AEV+ ++ A+T+QELL+A+ VAN  LQ L+IFDSVKITLDSGPPELPGT NVVI+VVE+ +P++G+ G +TK
Subjt:  AEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAACTCTGAGGAAGTAGGAAAAAGTTCGATTGGATTAAACTCTGAGGAGGAGCAAGCAGAGCGTGAACCTTCCAATTTCGAAAATGGCGACGGAGAAGATGAGGA
TGGAGATGAGGATGTTGAAGATGAGGAAGAAGACGAGGAAGATGAGGATGACAATGATGAAGAACCGCCGCGGAGGAAGCCTATTTCGGATGCTTCAAGGTTGCTTGCTC
AGAGGTCCAAGTTAGAGAATCTGGTTGAGCGAATGAGGAAGGAGAAGGTCAGACTTCGGGTTCATGATATTTTGATAAAGGGGAACACGAAGACCAAGGATTCTCTAATT
GAGGCCGAAGTGGAGGCTATTAAGAATGCCTCAACCATGCAAGAACTGCTGGAGGCCGCGGGTGTAGCCAATGCCAAGCTCCAGAGGCTGGAGATCTTCGACTCTGTCAA
GATTACACTTGATTCAGGCCCGCCGGAGCTCCCTGGTACTGCAAATGTTGTCATCGAGGTCGTGGAAACGGGCAACCCTCTCTCGGGCGAATGCGGTGCTTACACAAAAC
CTGCGGTAGGATTCTGTTCTGTATGTGTATGTGTAGATATCTGCGTCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MANSEEVGKSSIGLNSEEEQAEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDNDEEPPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLI
EAEVEAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPAVGFCSVCVCVDICV

Lsi08G007030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome