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Lsi08G007130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G007130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationchr08:15463461..15469578
RNA-Seq ExpressionLsi08G007130
SyntenyLsi08G007130
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036482.1 auxin-induced protein X15-like [Cucumis melo var. makuwa]1.2e-2569.07Show/hide
Query:  EMMEGKSKKGKKLVTEVLEYAK--WWFCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK
        +M+EGK KKGK L ++V++Y K  WW CWGV  + AKA PKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEEM    N N K  + PCK
Subjt:  EMMEGKSKKGKKLVTEVLEYAK--WWFCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK

KGN48091.2 hypothetical protein Csa_004000 [Cucumis sativus]1.7e-2469.07Show/hide
Query:  EMMEGKSKKGKKLVTEVLEYA-KWW-FCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK
        +M+EGK KKGK L ++V++Y  KWW  CWGV  + AKAIPKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEE     N N K  + PCK
Subjt:  EMMEGKSKKGKKLVTEVLEYA-KWW-FCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK

XP_004149915.1 auxin-induced protein 15A [Cucumis sativus]1.7e-2469.07Show/hide
Query:  EMMEGKSKKGKKLVTEVLEYA-KWW-FCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK
        +M+EGK KKGK L ++V++Y  KWW  CWGV  + AKAIPKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEE     N N K  + PCK
Subjt:  EMMEGKSKKGKKLVTEVLEYA-KWW-FCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK

XP_022134179.1 indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]5.6e-1559.77Show/hide
Query:  MEGKS-----KKGKKLVTEVLEYAKWW--FC-WGVK----EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEM
        M+GKS     KK +    + L+YA  W  +C W +     EAKAIP+DVPKGHFVVYVGEE +RYVIEI VLK+P+FK LLDSAEEM
Subjt:  MEGKS-----KKGKKLVTEVLEYAKWW--FC-WGVK----EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEM

XP_022959679.1 auxin-induced protein 15A-like [Cucurbita moschata]7.3e-1552.94Show/hide
Query:  MEGK-----SKKGKKLVTEVLEYAKWWFCWGVK--------EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLN-KNVKGDVPP
        M+GK     ++K KK  T+V +YA  W C G +        E+ AIP+DVPKGHFVVYVGEE +RYV+EI +LKHPLFK LLDSAEE+    N      P
Subjt:  MEGK-----SKKGKKLVTEVLEYAKWWFCWGVK--------EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLN-KNVKGDVPP

Query:  CK
        CK
Subjt:  CK

TrEMBL top hitse value%identityAlignment
A0A0A0KJ86 Uncharacterized protein8.4e-2569.07Show/hide
Query:  EMMEGKSKKGKKLVTEVLEYA-KWW-FCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK
        +M+EGK KKGK L ++V++Y  KWW  CWGV  + AKAIPKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEE     N N K  + PCK
Subjt:  EMMEGKSKKGKKLVTEVLEYA-KWW-FCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK

A0A5D3BLH1 Auxin-induced protein X15-like5.8e-2669.07Show/hide
Query:  EMMEGKSKKGKKLVTEVLEYAK--WWFCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK
        +M+EGK KKGK L ++V++Y K  WW CWGV  + AKA PKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEEM    N N K  + PCK
Subjt:  EMMEGKSKKGKKLVTEVLEYAK--WWFCWGV--KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEML---NKNVKGDVPPCK

A0A6J1BY27 indole-3-acetic acid-induced protein ARG7-like2.7e-1559.77Show/hide
Query:  MEGKS-----KKGKKLVTEVLEYAKWW--FC-WGVK----EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEM
        M+GKS     KK +    + L+YA  W  +C W +     EAKAIP+DVPKGHFVVYVGEE +RYVIEI VLK+P+FK LLDSAEEM
Subjt:  MEGKS-----KKGKKLVTEVLEYAKWW--FC-WGVK----EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEM

A0A6J1H8T2 auxin-induced protein 15A-like3.5e-1552.94Show/hide
Query:  MEGK-----SKKGKKLVTEVLEYAKWWFCWGVK--------EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLN-KNVKGDVPP
        M+GK     ++K KK  T+V +YA  W C G +        E+ AIP+DVPKGHFVVYVGEE +RYV+EI +LKHPLFK LLDSAEE+    N      P
Subjt:  MEGK-----SKKGKKLVTEVLEYAKWWFCWGVK--------EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLN-KNVKGDVPP

Query:  CK
        CK
Subjt:  CK

D7LJB4 Auxin-responsive family protein2.8e-1247Show/hide
Query:  KKGKKLVTEVL------EYAKWWFCWGV-KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDV-PPCKLNTREDEVK
        KK KK+ T+V+      E      CW   KEA+ IP+DVPKGH VVYVGEE+KR+VI+I +LKHPLF+ LLD A++    +    +  PC  +T  D V+
Subjt:  KKGKKLVTEVL------EYAKWWFCWGV-KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDV-PPCKLNTREDEVK

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR503.4e-0753.06Show/hide
Query:  GVKEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE
        G  +   +P DVPKGHF VYVGE   RY++ I  L HP F+ LL  AEE
Subjt:  GVKEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE

P0DKL1 Auxin-responsive protein SAUR503.1e-0850.88Show/hide
Query:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKN-VKGDVPPCK
        +P DVPKGHFVVYVGE   RY++ I  L HP F+ LL  +EE    N   G + PC+
Subjt:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKN-VKGDVPPCK

P32295 Indole-3-acetic acid-induced protein ARG73.2e-0552.17Show/hide
Query:  EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE
        EA +   D PKG+  VYVGE  KR+VI +  L  PLF+ LL  AEE
Subjt:  EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE

P33080 Auxin-induced protein X10A1.6e-0439.13Show/hide
Query:  EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKN--VKGDVPPCKLNTREDE
        +A +   +VPKG+ VVYVG++ +R++I +  L  P F+ LL+ AEE    +  + G   PCK    EDE
Subjt:  EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKN--VKGDVPPCKLNTREDE

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 103.2e-0554.76Show/hide
Query:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE
        +P+DVPKGHF VYVG    RY++ I  L H  F+ LL  AEE
Subjt:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE

Arabidopsis top hitse value%identityAlignment
AT2G21220.1 SAUR-like auxin-responsive protein family4.9e-0957.45Show/hide
Query:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKN
        +P DVPKGHF VYVGE+  RY++ I  L HP FK LL  AEE    N
Subjt:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKN

AT2G37030.1 SAUR-like auxin-responsive protein family1.6e-1546Show/hide
Query:  KKGKKLVTEVL------EYAKWWFCWGV-KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDV-PPCKLNTREDEVK
        KK KK+ ++V+      E      CW   KEA+ IP+DVPKGH VVYVGEE+KR+VI I +LKHPLF+ LLD A++    +    +  PC  +T  D V+
Subjt:  KKGKKLVTEVL------EYAKWWFCWGV-KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDV-PPCKLNTREDEVK

AT3G53250.1 SAUR-like auxin-responsive protein family5.1e-1451.35Show/hide
Query:  WGV-KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDVPPCKLNTREDEVK
        WG  KE +AIPKDVP+GH VVYVG+++KR+VI++ +L HP+FK LLD A++  N +      PC  NT  D V+
Subjt:  WGV-KEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDVPPCKLNTREDEVK

AT4G38860.1 SAUR-like auxin-responsive protein family6.4e-0956.52Show/hide
Query:  EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE
        + + +P DVPKGHF VYVGE+  RY++ I  L HP F ILL  AEE
Subjt:  EAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEE

AT5G20810.1 SAUR-like auxin-responsive protein family1.9e-0845.76Show/hide
Query:  PKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDVP-PCKLNT
        P DVPKG+  VYVG E +R++I    L H LFK+LL+ AEE    +  G +  PC++ T
Subjt:  PKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDVP-PCKLNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTCAAACCAAAGCATCACTCTCTCAGATCAATATCACGATCGCGATTAGCAACGACGTACGAGATGATGGAAGGAAAATCGAAGAAGGGAAAAAAGTTAGTAAC
TGAAGTTTTAGAGTATGCAAAATGGTGGTTTTGTTGGGGTGTGAAAGAAGCAAAAGCAATTCCTAAAGATGTTCCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGAAT
GGAAGAGATATGTTATTGAGATTGGAGTGTTGAAACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAATGCTAAACAAAAATGTCAAAGGGGACGTACCTCCA
TGTAAATTAAATACCAGAGAGGATGAGGTGAAAAGTTGCTGCTGCTCTACCATGGAAGGGAAGGATGTGGCACTGTACCAAAGCTGTCTAATTGAAATCGGGTTTCTCGG
GACGCATAGCAACCAGCTTTCACACAGTCTTCAATGGGCTTCTCTTGAACCAGTTGAGATAAGAATCCCCCAACAAATGCATCTCCTGTTGCAAGAACAACGATCACAAA
TCGAAAGACAAGAAAGTCAGCTTCAATATGAAAGGAAGTACGACTACACGTGCCCTCACGTAAAGATGGTAGAGAAAACTGCACAAGACTTACGGCAGAGCTTTCTCCTG
CACATCTCTGAAGAATTCACAAATGAAAGGAGCAGAAAGATTCATGCTGAAGACCTGCAGAAGTACGATAATTTTTCTAAAGTGCTGAAACTAGAATTCGAAGGAATTAT
ATTCAAACATCAAGTGTGGAAATGTCACCTTGTTGTTTGCAGCAGCATGAGCAGCAACGAGTTGGATGGACTCCGGGGACACCGTCAAGAAAAATCCAGCAATATAGAAG
GTAAAAATATCACTAATGAGGCTAGTACCAACCTGAGCAACTTTAATGGAATTTTGAGTGGCGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTCAAACCAAAGCATCACTCTCTCAGATCAATATCACGATCGCGATTAGCAACGACGTACGAGATGATGGAAGGAAAATCGAAGAAGGGAAAAAAGTTAGTAAC
TGAAGTTTTAGAGTATGCAAAATGGTGGTTTTGTTGGGGTGTGAAAGAAGCAAAAGCAATTCCTAAAGATGTTCCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGAAT
GGAAGAGATATGTTATTGAGATTGGAGTGTTGAAACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAATGCTAAACAAAAATGTCAAAGGGGACGTACCTCCA
TGTAAATTAAATACCAGAGAGGATGAGGTGAAAAGTTGCTGCTGCTCTACCATGGAAGGGAAGGATGTGGCACTGTACCAAAGCTGTCTAATTGAAATCGGGTTTCTCGG
GACGCATAGCAACCAGCTTTCACACAGTCTTCAATGGGCTTCTCTTGAACCAGTTGAGATAAGAATCCCCCAACAAATGCATCTCCTGTTGCAAGAACAACGATCACAAA
TCGAAAGACAAGAAAGTCAGCTTCAATATGAAAGGAAGTACGACTACACGTGCCCTCACGTAAAGATGGTAGAGAAAACTGCACAAGACTTACGGCAGAGCTTTCTCCTG
CACATCTCTGAAGAATTCACAAATGAAAGGAGCAGAAAGATTCATGCTGAAGACCTGCAGAAGTACGATAATTTTTCTAAAGTGCTGAAACTAGAATTCGAAGGAATTAT
ATTCAAACATCAAGTGTGGAAATGTCACCTTGTTGTTTGCAGCAGCATGAGCAGCAACGAGTTGGATGGACTCCGGGGACACCGTCAAGAAAAATCCAGCAATATAGAAG
GTAAAAATATCACTAATGAGGCTAGTACCAACCTGAGCAACTTTAATGGAATTTTGAGTGGCGCCTAG
Protein sequenceShow/hide protein sequence
MKVKPKHHSLRSISRSRLATTYEMMEGKSKKGKKLVTEVLEYAKWWFCWGVKEAKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMLNKNVKGDVPP
CKLNTREDEVKSCCCSTMEGKDVALYQSCLIEIGFLGTHSNQLSHSLQWASLEPVEIRIPQQMHLLLQEQRSQIERQESQLQYERKYDYTCPHVKMVEKTAQDLRQSFLL
HISEEFTNERSRKIHAEDLQKYDNFSKVLKLEFEGIIFKHQVWKCHLVVCSSMSSNELDGLRGHRQEKSSNIEGKNITNEASTNLSNFNGILSGA