CuGenDBv2

Gene ID	Lsi08G007210
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ubiquitin-like protein 5
Genome location	chr08:15573914..15578362
RNA-Seq Expression	Lsi08G007210
Synteny	Lsi08G007210
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0006464 - cellular protein modification process (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0005515 - protein binding (molecular function) GO:0031386 - protein tag (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR029071 - Ubiquitin-like domain superfamily IPR039732 - Ubiquitin-like modifier Hub1/Ubl5

Homology

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GenBank top hits

e value

%identity

Alignment

KAC9631537.1 hypothetical protein E3N88_45505 [Mikania micrantha]

1.8e-33

98.63

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

NP_199045.1 ubiquitin-like protein 5 [Arabidopsis thaliana]

8.1e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_002312015.1 ubiquitin-like protein 5 [Populus trichocarpa]

1.4e-33

98.63

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_017249268.1 PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus]

1.8e-33

98.63

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

XP_022016121.2 uncharacterized protein LOC110915698 [Helianthus annuus]

1.8e-33

98.63

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

TrEMBL top hits

e value

%identity

Alignment

A0A200R5R7 Ubiquitin domain

3.9e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A384KQX3 (thale cress) hypothetical protein

3.9e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A0A6N2M145 Ubiquitin-like domain-containing protein

6.7e-34

98.63

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

A9PD58 Ubiquitin-like domain-containing protein

6.7e-34

98.63

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Q570V8 Ubiquitin-like protein

3.9e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

SwissProt top hits

e value

%identity

Alignment

Q3T0Z3 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q6EGX7 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9BZL1 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9EPV8 Ubiquitin-like protein 5

4.0e-28

80.56

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9FGZ9 Ubiquitin-like protein 5

1.1e-36

100

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Arabidopsis top hits

e value

%identity

Alignment

AT3G45180.1 Ubiquitin-like superfamily protein

1.2e-35

94.52

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN++DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

AT5G42300.1 ubiquitin-like protein 5

7.5e-38

100

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Query:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Sequences

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CDS sequence

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ATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGACGACGACACCATCGGCGACTTGAAGAAGCTCGTGGCTGCCCAGACTGGGAC
TAGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTCAAGGATTACGAAATCCACGACGGCATGGGCCTCGAACTCTACTACAATT
AG

mRNA sequence

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CAAGGCGGCGGAAAATAAATAATAAAAAACGAACGAGCGCAAAAATTTTCTCTTTAATTTTGCATTTTGCTCCGTTGAACTCTGAGACGACCTAGGGTTTTGCTTTTCTT
GGGAGAGAGAAGAAAGAAGAAGATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGACGACGACACCATCGGCGACTTGAAGAAGC
TCGTGGCTGCCCAGACTGGGACTAGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTCAAGGATTACGAAATCCACGACGGCATG
GGCCTCGAACTCTACTACAATTAGTTAATGCAGGCACGGAAAGCCATATGCTGTGCTTTGCTACCACCCTCTTAGCTCAATGTTGTCGTATGGCGCTGCCTGTGTAATTT
GTAACATAAGACGCATATATTGATAACTGTTTCAGAATAAAACTCGGTTTGGGACTTCAATGTAATACTAATACATACACAATCAAACTGCTTGTTTCGGTGATATTATA
TGTTGTGGTAACTTCAATTAACTTTATGCTTTAAGGAATCGTTTAGTTTTGTATTTTCATTGATTTTGAATTTAAGAAGTGGATTTCAAATTCAAAATCTGAAAAACTAT
ATGTGATATTACATGCATACATATGACAGTGGAGCAAGCTGAATTATCATTCTTGATCCTATGAATTTACTTTATTTTCATTGTTACCCTATTTTTTATTTGAAGATTTA
GGATTAAGGTTATAGAATCATTGTTTGAAGATTCGGATTCTTTTGTCAGTAAATAATTGATTTTTAGTATATTCGTTAATGATATAATAAAAATTGATATATATGTGTAG
GGTGGAGAATATATTCTCCTAACATTCTCAGGAAGTGAATAAAGGGGTTTGTGGAGGCAACGAGGAATCAGATCAGAGAGAGCAATATTTAATGTTGATATTGAGCTGTT
TTTAGCAATCGTCAAAGTTGGAAGAAACCATGGCGATGAACAAGGTAATAAATGTCTGTTTGTTTGACCAAATTTGTTGTTGACTTTACAGCTAAATAACACCATCTCAA
ACTAATGCCAAGTTGGTCCAATGTTTTTTC

Protein sequence

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MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Lsi08G007210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome