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Lsi08G007290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G007290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:15626962..15633428
RNA-Seq ExpressionLsi08G007290
SyntenyLsi08G007290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016286.1 hypothetical protein SDJN02_21392, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1135.14Show/hide
Query:  KKKKRREEEARKEMKRTKDIYTVKKIGNLCGIPLCPREDRQSCLPYTSTWMCKQGHDREEHLTPM---------------------------EEQNCSNC
        +K + R++   +   RTKDIY+      L G P CP EDRQSCL         + +  E  +  +                             +N   C
Subjt:  KKKKRREEEARKEMKRTKDIYTVKKIGNLCGIPLCPREDRQSCLPYTSTWMCKQGHDREEHLTPM---------------------------EEQNCSNC

Query:  --------------KAC-----CVINA-----------INRAPKSQTRFQPPNPLPISKPFDAGNDRTALANSASSLSKTGEPSP
                      KAC     C + +           +  APK+QT+ +PPNPLPISKPFDAGNDRTALA+SASSLS TGEPSP
Subjt:  --------------KAC-----CVINA-----------INRAPKSQTRFQPPNPLPISKPFDAGNDRTALANSASSLSKTGEPSP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAAATTATAATAGGATGGTGTAAGAAGAAGAAGAGAAGAGAAGAGGAGGCCAGGAAGGAAATGAAAAGGACAAAAGACATATATACAGTAAAAAAGATTGGTAA
TCTTTGTGGGATACCCCTTTGCCCAAGAGAGGACAGACAGTCTTGTCTTCCATACACAAGTACATGGATGTGCAAGCAAGGTCATGATAGAGAAGAGCATCTTACCCCAA
TGGAAGAACAAAACTGCAGCAACTGCAAAGCGTGTTGTGTAATCAATGCAATAAATCGTGCTCCAAAGAGCCAGACAAGGTTTCAACCTCCAAATCCACTGCCGATTTCA
AAGCCCTTTGATGCGGGTAATGACAGAACAGCTTTAGCAAACTCAGCTTCAAGTTTGTCAAAAACTGGTGAACCAAGCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAAATTATAATAGGATGGTGTAAGAAGAAGAAGAGAAGAGAAGAGGAGGCCAGGAAGGAAATGAAAAGGACAAAAGACATATATACAGTAAAAAAGATTGGTAA
TCTTTGTGGGATACCCCTTTGCCCAAGAGAGGACAGACAGTCTTGTCTTCCATACACAAGTACATGGATGTGCAAGCAAGGTCATGATAGAGAAGAGCATCTTACCCCAA
TGGAAGAACAAAACTGCAGCAACTGCAAAGCGTGTTGTGTAATCAATGCAATAAATCGTGCTCCAAAGAGCCAGACAAGGTTTCAACCTCCAAATCCACTGCCGATTTCA
AAGCCCTTTGATGCGGGTAATGACAGAACAGCTTTAGCAAACTCAGCTTCAAGTTTGTCAAAAACTGGTGAACCAAGCCCCTGA
Protein sequenceShow/hide protein sequence
MRKIIIGWCKKKKRREEEARKEMKRTKDIYTVKKIGNLCGIPLCPREDRQSCLPYTSTWMCKQGHDREEHLTPMEEQNCSNCKACCVINAINRAPKSQTRFQPPNPLPIS
KPFDAGNDRTALANSASSLSKTGEPSP