; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G007490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G007490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF1338 domain-containing protein
Genome locationchr08:15851256..15852642
RNA-Seq ExpressionLsi08G007490
SyntenyLsi08G007490
Gene Ontology termsGO:0006820 - anion transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009770 - Domain of unknown function DUF1338


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045391.1 uncharacterized protein E6C27_scaffold422G00020 [Cucumis melo var. makuwa]4.5e-6687.5Show/hide
Query:  VPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQR
        +PK + G RLFSIMS+AE  NG QGSR  GAESFLRNVL SMEAVYLSRNPTAK+ILELVRS H+DTICYDHIAFRTFGM+GHGIDSLASFFLDFGYTQ+
Subjt:  VPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQR

Query:  EELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ
        EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQMS+QTQ
Subjt:  EELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ

XP_008464777.1 PREDICTED: uncharacterized protein LOC103502586 isoform X1 [Cucumis melo]6.0e-7980.58Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA
        MSSL SS A   PTL+TKSFQP    FSS PIS NFISL+G SSS+PK + G RLFSIMS+AE  NG QGSRVKGAESFLRNVL SMEAVYLSRNPTAK+
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA

Query:  ILELVRSVHNDTICYDHIAFRTFG---------MNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQ
        ILELVRS H+DTICYDHIAFRTFG         M+GHGIDSLASFFLDFGYTQ+EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQ
Subjt:  ILELVRSVHNDTICYDHIAFRTFG---------MNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQ

Query:  MSQQTQ
        MS+QTQ
Subjt:  MSQQTQ

XP_008464778.1 PREDICTED: uncharacterized protein LOC103502586 isoform X2 [Cucumis melo]2.9e-8184.26Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA
        MSSL SS A   PTL+TKSFQP    FSS PIS NFISL+G SSS+PK + G RLFSIMS+AE  NG QGSRVKGAESFLRNVL SMEAVYLSRNPTAK+
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA

Query:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ
        ILELVRS H+DTICYDHIAFRTFGM+GHGIDSLASFFLDFGYTQ+EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQMS+QTQ
Subjt:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ

XP_011657480.2 uncharacterized protein LOC101218869 [Cucumis sativus]7.4e-7780.71Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA
        MSSL S +A   PTL+TK FQP    FSS PIS NFIS  GK S + K + G RLFSIMSTA+  NG QGSRVKGAESFLRNVL SMEAVYL RNPTAK+
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA

Query:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ
        +LELVRSVH DTICYDHIAFRTFG++GHGIDSLASFFLDFGYTQ+EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQMS+QTQ
Subjt:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ

XP_038886795.1 uncharacterized protein LOC120076905 [Benincasa hispida]1.5e-8286.8Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPKSTGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKAI
        MSSL SS A TFPTL+ KSFQP    FSS PIS NFISLVGKSSS+PK   KR FSIMSTAES NG QGSRVKG ESFLRNVL SMEAVYLSRNPTAKAI
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPKSTGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKAI

Query:  LELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAA-YDGNGVNGPLPRVFISQLLVDQMSQQTQ
        LELV SV NDTI YDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKA WFSPPSISNAA YDGNG+NGPLPRVFISQLLVDQMSQQTQ
Subjt:  LELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAA-YDGNGVNGPLPRVFISQLLVDQMSQQTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJ38 DUF1338 domain-containing protein3.6e-7780.71Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA
        MSSL S +A   PTL+TK FQP    FSS PIS NFIS  GK S + K + G RLFSIMSTA+  NG QGSRVKGAESFLRNVL SMEAVYL RNPTAK+
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA

Query:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ
        +LELVRSVH DTICYDHIAFRTFG++GHGIDSLASFFLDFGYTQ+EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQMS+QTQ
Subjt:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ

A0A1S3CME1 uncharacterized protein LOC103502586 isoform X21.4e-8184.26Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA
        MSSL SS A   PTL+TKSFQP    FSS PIS NFISL+G SSS+PK + G RLFSIMS+AE  NG QGSRVKGAESFLRNVL SMEAVYLSRNPTAK+
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA

Query:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ
        ILELVRS H+DTICYDHIAFRTFGM+GHGIDSLASFFLDFGYTQ+EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQMS+QTQ
Subjt:  ILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ

A0A1S3CNV1 uncharacterized protein LOC103502586 isoform X12.9e-7980.58Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA
        MSSL SS A   PTL+TKSFQP    FSS PIS NFISL+G SSS+PK + G RLFSIMS+AE  NG QGSRVKGAESFLRNVL SMEAVYLSRNPTAK+
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKA

Query:  ILELVRSVHNDTICYDHIAFRTFG---------MNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQ
        ILELVRS H+DTICYDHIAFRTFG         M+GHGIDSLASFFLDFGYTQ+EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQ
Subjt:  ILELVRSVHNDTICYDHIAFRTFG---------MNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQ

Query:  MSQQTQ
        MS+QTQ
Subjt:  MSQQTQ

A0A5A7TV44 DUF1338 domain-containing protein2.2e-6687.5Show/hide
Query:  VPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQR
        +PK + G RLFSIMS+AE  NG QGSR  GAESFLRNVL SMEAVYLSRNPTAK+ILELVRS H+DTICYDHIAFRTFGM+GHGIDSLASFFLDFGYTQ+
Subjt:  VPK-STGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQR

Query:  EELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ
        EELSFPAKKLKAFWFSPPSISNAAYDG+GVNGPLPRVFISQLLVDQMS+QTQ
Subjt:  EELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ

A0A6J1GHV7 uncharacterized protein LOC1114543052.4e-6571.43Show/hide
Query:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVP-----KSTGKRLFSIMSTAESSNGTQ--GSRVKGAESFLRNVLTSMEAVYLSR
        M+SLS SA     T R  S +PSSSL    PIS NF SL+ KSSS+P      S G RLFSIM+TA+  N  Q   SR+KGAESFLRNVL SMEAVYL+R
Subjt:  MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVP-----KSTGKRLFSIMSTAESSNGTQ--GSRVKGAESFLRNVLTSMEAVYLSR

Query:  NPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQ
        NP+AKAILELVRSV ND ICYDH+AFRTFG +GHGIDSLA+FFLDFGYT++EELSFPAKKLKAFWFSPP  S+AAYDG+GV+GPLPRVFIS+LLVD MS 
Subjt:  NPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQ

Query:  QTQ
        QTQ
Subjt:  QTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07040.1 unknown protein2.2e-4757.38Show/hide
Query:  SSLFSSKPISM-NFISLVGKSSSVPK--STGKRLFSIM------STAESSNGTQGSRVK-GAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTIC
        +SL+ S P S+ + +S+   + S+ +  S GKR  S++      S+  S+N ++GS  K  AESF R+VL  ME VYL+RNPT K++LELVRSV +  +C
Subjt:  SSLFSSKPISM-NFISLVGKSSSVPK--STGKRLFSIM------STAESSNGTQGSRVK-GAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTIC

Query:  YDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ
        YDH+AFRTFG+ G+GIDSLASFFLD+GYT  +EL FPAKKL+A WF+PP+ S A   G+GVNGPLPRVFIS+LLVDQMS QTQ
Subjt:  YDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQ

AT1G27020.1 unknown protein6.5e-3151.61Show/hide
Query:  GAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNG
        G+E+FL+NV  S+   YL +NP AK I ELV+SV N+ I YDH  FRTF ++G+GIDSLASFF+D+GY     L FP KK++  W SPP + +   +G G
Subjt:  GAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNG

Query:  V-NGPLPRVFISQLLVDQMSQQTQ
        + NGPLPR+ I++LLV+++S ++Q
Subjt:  V-NGPLPRVFISQLLVDQMSQQTQ

AT1G27030.1 unknown protein1.3e-3151.94Show/hide
Query:  SRVKG-AESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAA
        S  KG +E FLRNV  ++   YL +NPTAK I ELV+S+ N+ ICYDH  FRT  ++G+GIDSL+SFF+ +GY     L FP KKL+  WFSPP + +  
Subjt:  SRVKG-AESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHNDTICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAA

Query:  YDGNGV-NGPLPRVFISQLLVDQMSQQTQ
         DG+G+ NGPLPR+ I+++LVD++S ++Q
Subjt:  YDGNGV-NGPLPRVFISQLLVDQMSQQTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCTTTCTTCCTCAGCGGCCACAACTTTTCCCACTCTCAGAACAAAATCATTTCAACCTTCTTCTTCTTTGTTTTCTTCAAAACCCATTTCCATGAATTTCAT
TTCCCTCGTCGGAAAATCTTCGTCGGTGCCGAAATCTACGGGGAAGCGATTGTTCTCAATCATGTCCACCGCTGAATCTTCCAATGGAACACAAGGATCAAGGGTTAAGG
GAGCTGAATCCTTCCTTAGGAATGTTTTGACGAGCATGGAGGCAGTTTATCTGAGTCGTAATCCCACTGCAAAAGCTATATTGGAGCTTGTTCGATCGGTTCATAATGAT
ACAATTTGCTATGATCATATTGCATTTAGGACTTTTGGGATGAATGGGCATGGGATTGACTCATTAGCAAGCTTTTTTCTGGATTTTGGATATACTCAAAGAGAAGAATT
ATCATTCCCAGCAAAAAAGTTGAAAGCATTTTGGTTTTCACCTCCCTCCATTTCTAATGCTGCTTATGATGGCAATGGAGTCAATGGACCTCTGCCAAGAGTGTTCATAT
CACAACTTCTTGTAGATCAGATGAGTCAACAAACTCAGGTGTGCTTTTCACCAATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
TCCAAATTAAGAAAAGCAAAACTCAAATTGAACAAGTCATTGGTTAGTTTGTAAATTTAAAAAACCAACCTTTTCTTCGTTCTAATCCTTTTCGAACATTTCCGTAAAGA
AGCAGGAAAAACTGCCAACTCGCAGTTCAAAATCCCATAATTAATCAATCAATCTGGCATTTCGCCTTCTTGGAAATAAGATTCTTCTCCCAATTCTGACATTACCCTGA
AGATTCCTCACAATCTCTTTCTTTATCCAACCATCCGTAACAAAAGATTCCCAGATACCAAACCCATGTCTTCCCTTTCTTCCTCAGCGGCCACAACTTTTCCCACTCTC
AGAACAAAATCATTTCAACCTTCTTCTTCTTTGTTTTCTTCAAAACCCATTTCCATGAATTTCATTTCCCTCGTCGGAAAATCTTCGTCGGTGCCGAAATCTACGGGGAA
GCGATTGTTCTCAATCATGTCCACCGCTGAATCTTCCAATGGAACACAAGGATCAAGGGTTAAGGGAGCTGAATCCTTCCTTAGGAATGTTTTGACGAGCATGGAGGCAG
TTTATCTGAGTCGTAATCCCACTGCAAAAGCTATATTGGAGCTTGTTCGATCGGTTCATAATGATACAATTTGCTATGATCATATTGCATTTAGGACTTTTGGGATGAAT
GGGCATGGGATTGACTCATTAGCAAGCTTTTTTCTGGATTTTGGATATACTCAAAGAGAAGAATTATCATTCCCAGCAAAAAAGTTGAAAGCATTTTGGTTTTCACCTCC
CTCCATTTCTAATGCTGCTTATGATGGCAATGGAGTCAATGGACCTCTGCCAAGAGTGTTCATATCACAACTTCTTGTAGATCAGATGAGTCAACAAACTCAGGTGTGCT
TTTCACCAATTTCTTGA
Protein sequenceShow/hide protein sequence
MSSLSSSAATTFPTLRTKSFQPSSSLFSSKPISMNFISLVGKSSSVPKSTGKRLFSIMSTAESSNGTQGSRVKGAESFLRNVLTSMEAVYLSRNPTAKAILELVRSVHND
TICYDHIAFRTFGMNGHGIDSLASFFLDFGYTQREELSFPAKKLKAFWFSPPSISNAAYDGNGVNGPLPRVFISQLLVDQMSQQTQVCFSPIS