; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G007510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G007510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationchr08:15866518..15867066
RNA-Seq ExpressionLsi08G007510
SyntenyLsi08G007510
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039364.1 exopolygalacturonase-like [Cucumis melo var. makuwa]4.3e-7678.16Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +LK SFI ++IVSDITSKDS+NFH+ VLGC NLTFQH  ++AP  SIN DGIHIGRSLGINI+NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY++EEPVEG+ VKNCTL  T+NG+RIKTWPASP  G  SDMHYE+ +M N+ NPILIDQE CPYNQCN +V
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

KAE8648971.1 hypothetical protein Csa_008488 [Cucumis sativus]6.4e-7272.41Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        SLK SFI +S+VS ITSKDS+NFH+ VLGC N T Q+  ++APG SIN DGIH+GR +GINI+N+NIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY+ EEPVEG+ VKNCT+  T++G+RIKTWPASP  G  SDMHYE+ +M N+SNPI+IDQE CPYN+CN ++
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

XP_008459709.2 PREDICTED: exopolygalacturonase-like [Cucumis melo]4.3e-7678.16Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +LK SFI ++IVSDITSKDS+NFH+ VLGC NLTFQH  ++AP  SIN DGIHIGRSLGINI+NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY++EEPVEG+ VKNCTL  T+NG+RIKTWPASP  G  SDMHYE+ +M N+ NPILIDQE CPYNQCN +V
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

XP_022150984.1 exopolygalacturonase-like [Momordica charantia]2.5e-7679.89Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        SLK SFIT+SIVS+ITSKDS+NFHV VLGC NLTF+H TIDAPG+SIN DGIHIGRS  +N+++T IGTGDDCISLGDGSK VTI NVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY VEEPVEGI VKNCT  NT NGVRIKTWPASP  GT ++MHYE+ IMVN+SNPILIDQE CPYNQCN K+
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

XP_022157387.1 exopolygalacturonase-like [Momordica charantia]4.2e-7982.08Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        SL+ SFIT+SIVSDITSKDS+NFHV +LGC NLTFQH  ++APG+SIN DGIHIGRS GINI++TNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        LGRY  EEPVEGI   NCT+MNTSNGVRIKTWPASP  GT SDMH+E+ IMVN+SNPILIDQE CPYNQCN K
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

TrEMBL top hitse value%identityAlignment
A0A0A0KVY5 Uncharacterized protein1.8e-7272.57Show/hide
Query:  MQSLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISV
        M SLK SFI +S+VS ITSKDS+NFH+ VLGC N T Q+  ++APG SIN DGIH+GR +GINI+N+NIGTGDDCISLGDGSKQVTITNVTCGPGHGISV
Subjt:  MQSLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISV

Query:  GSLGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        GSLGRY+ EEPVEG+ VKNCT+  T++G+RIKTWPASP  G  SDMHYE+ +M N+SNPI+IDQE CPYN+CN +
Subjt:  GSLGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

A0A1S3CC08 exopolygalacturonase-like2.1e-7678.16Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +LK SFI ++IVSDITSKDS+NFH+ VLGC NLTFQH  ++AP  SIN DGIHIGRSLGINI+NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY++EEPVEG+ VKNCTL  T+NG+RIKTWPASP  G  SDMHYE+ +M N+ NPILIDQE CPYNQCN +V
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

A0A5A7T7B3 Exopolygalacturonase-like2.1e-7678.16Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +LK SFI ++IVSDITSKDS+NFH+ VLGC NLTFQH  ++AP  SIN DGIHIGRSLGINI+NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY++EEPVEG+ VKNCTL  T+NG+RIKTWPASP  G  SDMHYE+ +M N+ NPILIDQE CPYNQCN +V
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

A0A6J1DBN7 exopolygalacturonase-like1.2e-7679.89Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        SLK SFIT+SIVS+ITSKDS+NFHV VLGC NLTF+H TIDAPG+SIN DGIHIGRS  +N+++T IGTGDDCISLGDGSK VTI NVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY VEEPVEGI VKNCT  NT NGVRIKTWPASP  GT ++MHYE+ IMVN+SNPILIDQE CPYNQCN K+
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

A0A6J1DUC6 exopolygalacturonase-like2.0e-7982.08Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        SL+ SFIT+SIVSDITSKDS+NFHV +LGC NLTFQH  ++APG+SIN DGIHIGRS GINI++TNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        LGRY  EEPVEGI   NCT+MNTSNGVRIKTWPASP  GT SDMH+E+ IMVN+SNPILIDQE CPYNQCN K
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)3.1e-6164.94Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +L+L  +T+SI+ D+T+ DS+NFHVNV+GCKNLTF+ F I A   SIN DGIHIGRS G+NIINT I TGDDCISLGDGSK + ITN+TCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV
        LGRY  EE V GI VKNCT+  + NGVRIKTWP S   G  S+MH+++  M ++  PILIDQ  CPYNQC  +V
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKV

Q39766 Polygalacturonase1.4e-5656.47Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +++  F+T++++ DITSKDS+ FH+NV  CKN+T +   I+AP  S N DGIH+G+S G+NII ++I TGDDCIS+GDG+K + I  +TCGPGHGIS+GS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQC
        LG++  EEPVEGI + NCT+ NTSNG RIKTWP     G  S++H+E+  M N+S+PILIDQ+ CP+N+C
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQC

Q39786 Polygalacturonase1.8e-5656.47Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +++  F+T++++ DITSKDS+ FH+NV  CKN+T +   I+AP  S N DGIH+G+S G+NII ++I TGDDCIS+GDG+K + I  +TCGPGHGIS+GS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQC
        LG++  EEPVEGI + NCT+ NTSNG RIKTWP     G  S++H+E+  M N+S+PILIDQ+ CP+N+C
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQC

Q40312 Polygalacturonase3.3e-6363.91Show/hide
Query:  SFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRY
        +F+ +SIV  +TSKDS+NFHV V GCKN+TF  FTI APG+S N DGIH+G+S  + I+NTNIGTGDDC+S+GDGSKQ+T+  V CGPGHG+SVGSLG++
Subjt:  SFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRY

Query:  DVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
          EE VEGITVKNCTL  T NGVRIKTWP +P   T SD+H+E+  M N+ NP++IDQE  P+NQC+ K
Subjt:  DVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

Q6H9K0 Exopolygalacturonase (Fragment)1.2e-5757.8Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +L+  F+ H++V DITS +S+ FH+NVL C+++TFQH T+ APG SIN DGIH+G S G+ I NT I TGDDCIS+G GS+ VTIT V CGPGHGIS+GS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        LGRY+ E+ V GITVK CT   T NGVR+KTWP SP  G  +D+ +++  M N+ NP+++DQE CPY QC+ +
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein2.8e-5758.38Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        S++  FI +S + DI+S D++NFH+NVLG KN+T  +  I AP +S N DGIH+GRS G+ I+N+ I TGDDCIS+GDG K + +  VTCGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        LGRY  E+ V GI V NCTL  T NG+RIKTWP++    T SD+H+E+ I+ ++SNPILIDQE CP+NQCN +
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

AT3G07830.1 Pectin lyase-like superfamily protein3.3e-5857.23Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        S++  F+T++ + DI+S D++NFH+NV+G KN+TF +  I AP  S N DGIH+GRS+G++IIN+ I TGDDC+S+GDG   + + NV CGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        LGRY  E+ V GI V NCTL  T NG+RIKTWP++    T S++H+E  I+ N+SNPILIDQE CP+NQCN +
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

AT3G07840.1 Pectin lyase-like superfamily protein5.6e-5857.8Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        S++  F+ ++ + DI+S D++NFH+NVLG KN+TF +  + AP  S N DGIH+GRS G+ I+N+ I TGDDCIS+GDG K + + NV CGPGHGISVGS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        LGRY  E+ V GITV NCTL  T NG+RIKTWP++    T S +H+E  I+ N+SNPILIDQE CP+NQCN +
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK

AT3G07850.1 Pectin lyase-like superfamily protein4.9e-5454.71Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        +++ + +T+S ++ ITS +S+ FH+N+L CKN+T     IDAP  S+N DGIHIGRS G+N+I   I TGDDC+S+GDG++ + + NV CGPGHGIS+GS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQC
        LGRY  E+PV+G+TV+ C + NT NGVRIKTWP SP  G  S++ +E+  M N+S P+LIDQE CPY  C
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQC

AT5G48140.1 Pectin lyase-like superfamily protein9.6e-5857.23Show/hide
Query:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS
        S++  F+T + +  ITS D+++FH+NV+G KN+TF+   I AP  S N DGIH+GRS GI IIN+ I TGDDC+S+GDG K + +  VTCGPGHGIS+GS
Subjt:  SLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGS

Query:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK
        LGRY  EE V GI + NCTL  T NG+RIKTWP++    T SD+H+E  ++ N+SNPILIDQE CP+NQCN +
Subjt:  LGRYDVEEPVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGTTTGAAGTTGAGCTTTATCACACATTCGATAGTGAGTGACATAACATCTAAAGATAGCCAGAACTTTCATGTCAATGTATTGGGTTGTAAGAACCTCACCTT
CCAACATTTTACCATAGATGCACCCGGAAATAGTATTAATATTGACGGAATTCACATTGGTCGATCTCTTGGGATTAATATCATCAATACAAACATTGGTACTGGAGATG
ATTGTATCTCACTTGGGGACGGAAGTAAGCAAGTAACAATTACTAATGTGACATGTGGGCCTGGACATGGTATTAGTGTAGGAAGCCTTGGAAGGTATGATGTTGAAGAA
CCAGTGGAGGGAATCACAGTTAAGAATTGTACATTGATGAATACATCAAATGGTGTTAGAATCAAGACATGGCCTGCTTCTCCTGTTGTTGGAACGACTTCTGATATGCA
CTATGAAGAAACAATAATGGTCAATATCAGCAATCCAATTCTCATAGATCAAGAGTGTTGTCCATACAACCAATGCAATAACAAGGTAATATTTTATTTCTTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGTTTGAAGTTGAGCTTTATCACACATTCGATAGTGAGTGACATAACATCTAAAGATAGCCAGAACTTTCATGTCAATGTATTGGGTTGTAAGAACCTCACCTT
CCAACATTTTACCATAGATGCACCCGGAAATAGTATTAATATTGACGGAATTCACATTGGTCGATCTCTTGGGATTAATATCATCAATACAAACATTGGTACTGGAGATG
ATTGTATCTCACTTGGGGACGGAAGTAAGCAAGTAACAATTACTAATGTGACATGTGGGCCTGGACATGGTATTAGTGTAGGAAGCCTTGGAAGGTATGATGTTGAAGAA
CCAGTGGAGGGAATCACAGTTAAGAATTGTACATTGATGAATACATCAAATGGTGTTAGAATCAAGACATGGCCTGCTTCTCCTGTTGTTGGAACGACTTCTGATATGCA
CTATGAAGAAACAATAATGGTCAATATCAGCAATCCAATTCTCATAGATCAAGAGTGTTGTCCATACAACCAATGCAATAACAAGGTAATATTTTATTTCTTTCATTGA
Protein sequenceShow/hide protein sequence
MQSLKLSFITHSIVSDITSKDSQNFHVNVLGCKNLTFQHFTIDAPGNSINIDGIHIGRSLGINIINTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYDVEE
PVEGITVKNCTLMNTSNGVRIKTWPASPVVGTTSDMHYEETIMVNISNPILIDQECCPYNQCNNKVIFYFFH