; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G007900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G007900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:16313808..16316887
RNA-Seq ExpressionLsi08G007900
SyntenyLsi08G007900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038455.1 uncharacterized protein E6C27_scaffold119G00220 [Cucumis melo var. makuwa]3.0e-11074.75Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGM SCET+L +Y+SKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKL+NGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEH +YA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRASGGSTSCAPAFSS LA SPMAFSPV+SS PIFTEKPGNFLAV GSNL+ IPPGLEILRS DSNG T EQRTERLF LQK+LKH D+SDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHL--------------------------------SMRGPFAISATTAREDELVDWLVEQPADIEQTSIP
        KGVIE+ LH LPPSELSNFAINLEKRSMHL                                  RGPFAISA  AR D+L           EQTSIP
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHL--------------------------------SMRGPFAISATTAREDELVDWLVEQPADIEQTSIP

XP_008464851.1 PREDICTED: uncharacterized protein LOC103502625 isoform X1 [Cucumis melo]5.1e-11088.36Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGM SCET+L +Y+SKQSPIAQKKVALRDVQNDNRS+IYNYPETSCSLGGKL+NGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEH +YA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRASGGSTSCAPAFSS LA SPMAFSPV+SS PIFTEKPGNFLAV GSNL+ IPPGLEILRS DSNG T EQRTERLF LQK+LKH D+SDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KGVIE+VLH LPPSELSNFAINLEKRSMHLS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

XP_008464853.1 PREDICTED: uncharacterized protein LOC103502625 isoform X2 [Cucumis melo]3.6e-10887.93Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGM SCET+L +Y+SKQSPIAQKKVALRDVQNDNRS+IYNYPETSCSLGGKL+NGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEH +YA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRASGGSTSCAPAFSS LA SPMAFSPV+SS PIFTEKPGNFLAV GSNL+ IPPGLEILRS DSNG T EQRTERLF LQK+LKH D+SDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KGVIE+ LH LPPSELSNFAINLEKRSMHLS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

XP_022945996.1 uncharacterized protein LOC111450215 [Cucurbita moschata]9.0e-10789.22Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGMGSCETHLSMYKSKQSPIA KKVALRDVQNDNRSV+YNYPETSCSLGGKLVNGSK+SGSKRSNPTCSPSSAIHQSFKGIGVNEH IYA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRA GGSTSCAPAFSS LAASPMAFSPV+SSLPIFTEKPGNFLAVAGSNL+ I PGLEIL SVDSNG T EQRTERLF LQ +LKH DESDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KG IEL LH LPPSELS  AINLEK+SMHLS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

XP_038884507.1 uncharacterized protein LOC120075309 [Benincasa hispida]5.6e-10990.52Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGMGSCETHLSMY++KQSPIAQKKVALRDVQNDNRS++YNYPETSCSLGGKLVNGSKLSGSKRSNPT SPSSAIHQSFKGIGVNEHTIYASG
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRASGGSTSCAPAFSSLLAASPMA SPV+SSLPIFTEKPGNFLAVAGS+L+ IPPG EILRSVDSNG T EQRTERLF LQK LKH DESD+
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KGVIE  LH LPPSELSNFAINLEKRSM+LS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

TrEMBL top hitse value%identityAlignment
A0A1S3CME9 uncharacterized protein LOC103502625 isoform X12.5e-11088.36Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGM SCET+L +Y+SKQSPIAQKKVALRDVQNDNRS+IYNYPETSCSLGGKL+NGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEH +YA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRASGGSTSCAPAFSS LA SPMAFSPV+SS PIFTEKPGNFLAV GSNL+ IPPGLEILRS DSNG T EQRTERLF LQK+LKH D+SDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KGVIE+VLH LPPSELSNFAINLEKRSMHLS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

A0A1S3CMI7 uncharacterized protein LOC103502625 isoform X21.8e-10887.93Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGM SCET+L +Y+SKQSPIAQKKVALRDVQNDNRS+IYNYPETSCSLGGKL+NGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEH +YA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRASGGSTSCAPAFSS LA SPMAFSPV+SS PIFTEKPGNFLAV GSNL+ IPPGLEILRS DSNG T EQRTERLF LQK+LKH D+SDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KGVIE+ LH LPPSELSNFAINLEKRSMHLS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

A0A5A7TAR2 Uncharacterized protein1.4e-11074.75Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGM SCET+L +Y+SKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKL+NGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEH +YA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRASGGSTSCAPAFSS LA SPMAFSPV+SS PIFTEKPGNFLAV GSNL+ IPPGLEILRS DSNG T EQRTERLF LQK+LKH D+SDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHL--------------------------------SMRGPFAISATTAREDELVDWLVEQPADIEQTSIP
        KGVIE+ LH LPPSELSNFAINLEKRSMHL                                  RGPFAISA  AR D+L           EQTSIP
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHL--------------------------------SMRGPFAISATTAREDELVDWLVEQPADIEQTSIP

A0A6J1G2G3 uncharacterized protein LOC1114502154.3e-10789.22Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLNSGGMGSCETHLSMYKSKQSPIA KKVALRDVQNDNRSV+YNYPETSCSLGGKLVNGSK+SGSKRSNPTCSPSSAIHQSFKGIGVNEH IYA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRA GGSTSCAPAFSS LAASPMAFSPV+SSLPIFTEKPGNFLAVAGSNL+ I PGLEIL SVDSNG T EQRTERLF LQ +LKH DESDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KG IEL LH LPPSELS  AINLEK+SMHLS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

A0A6J1KE02 uncharacterized protein LOC1114940104.8e-10687.5Show/hide
Query:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG
        MIDSKLN+GGMGSCETHLSMYKSKQSPIA KKVALRDVQNDNRSV+YNYPETSCSLGGKLVNGSK+SGSKRSNPTCSP+SAIHQSFKGIGVNEH IYA+G
Subjt:  MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASG

Query:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ
        EVDVKPGKKRA GGSTSCAP FSS LAASP+AFSPV+SSLPIFTEKPGNFLAV GSNL+ IPPGLEIL SVDSNG T EQRTERLF LQ +LKH DESDQ
Subjt:  EVDVKPGKKRASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQ

Query:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM
        KG IEL LH LPPSELS  AINLEK+SMHLS+
Subjt:  KGVIELVLHSLPPSELSNFAINLEKRSMHLSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATAGCAAGTTGAACAGCGGTGGAATGGGCAGCTGTGAAACTCATTTGTCTATGTATAAGAGCAAGCAGTCACCAATTGCACAGAAAAAGGTTGCTTTAAGGGA
TGTGCAGAATGATAATAGGAGTGTCATTTATAACTATCCTGAAACTTCTTGTTCTTTGGGCGGAAAACTTGTGAATGGGAGTAAGCTTTCAGGAAGTAAGAGATCCAACC
CTACATGCTCACCGAGCTCTGCAATCCATCAATCCTTCAAAGGGATTGGGGTCAATGAGCATACCATTTATGCCAGCGGAGAAGTTGATGTGAAGCCTGGCAAAAAAAGA
GCATCAGGTGGTAGCACATCTTGTGCACCTGCATTTTCTTCTCTTCTTGCAGCCTCGCCGATGGCATTTTCACCTGTTAAGTCTTCACTTCCCATTTTCACAGAAAAGCC
TGGTAATTTTCTGGCAGTTGCTGGATCCAATCTTATGGAAATCCCTCCTGGTTTGGAGATTCTTCGCTCTGTTGATTCAAATGGGAATACTGGTGAGCAGAGAACAGAGC
GACTATTCAAACTGCAGAAGATCCTAAAACATTTGGACGAGTCAGATCAAAAAGGCGTCATTGAGTTAGTGCTCCATAGTTTACCTCCCTCTGAGCTCAGCAATTTTGCC
ATTAATCTGGAAAAGAGATCCATGCATCTGTCAATGAGAGGGCCATTTGCCATTTCTGCCACGACTGCACGAGAGGACGAACTAGTTGATTGGTTGGTGGAACAGCCAGC
TGATATTGAGCAAACCAGTATTCCTTGA
mRNA sequenceShow/hide mRNA sequence
CATCTTCTTCGAGCCAAAGTTTTCCCTTTTGAACTCGCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCGTCGGTTGCAAAACAAGCTTCTTACTCAGATGGACTT
TTCTAGTAATTTGAAATTGTTATTTGGTTGAAGCTCTTCAAGTTTTTTAAATGATTGATAGCAAGTTGAACAGCGGTGGAATGGGCAGCTGTGAAACTCATTTGTCTATG
TATAAGAGCAAGCAGTCACCAATTGCACAGAAAAAGGTTGCTTTAAGGGATGTGCAGAATGATAATAGGAGTGTCATTTATAACTATCCTGAAACTTCTTGTTCTTTGGG
CGGAAAACTTGTGAATGGGAGTAAGCTTTCAGGAAGTAAGAGATCCAACCCTACATGCTCACCGAGCTCTGCAATCCATCAATCCTTCAAAGGGATTGGGGTCAATGAGC
ATACCATTTATGCCAGCGGAGAAGTTGATGTGAAGCCTGGCAAAAAAAGAGCATCAGGTGGTAGCACATCTTGTGCACCTGCATTTTCTTCTCTTCTTGCAGCCTCGCCG
ATGGCATTTTCACCTGTTAAGTCTTCACTTCCCATTTTCACAGAAAAGCCTGGTAATTTTCTGGCAGTTGCTGGATCCAATCTTATGGAAATCCCTCCTGGTTTGGAGAT
TCTTCGCTCTGTTGATTCAAATGGGAATACTGGTGAGCAGAGAACAGAGCGACTATTCAAACTGCAGAAGATCCTAAAACATTTGGACGAGTCAGATCAAAAAGGCGTCA
TTGAGTTAGTGCTCCATAGTTTACCTCCCTCTGAGCTCAGCAATTTTGCCATTAATCTGGAAAAGAGATCCATGCATCTGTCAATGAGAGGGCCATTTGCCATTTCTGCC
ACGACTGCACGAGAGGACGAACTAGTTGATTGGTTGGTGGAACAGCCAGCTGATATTGAGCAAACCAGTATTCCTTGA
Protein sequenceShow/hide protein sequence
MIDSKLNSGGMGSCETHLSMYKSKQSPIAQKKVALRDVQNDNRSVIYNYPETSCSLGGKLVNGSKLSGSKRSNPTCSPSSAIHQSFKGIGVNEHTIYASGEVDVKPGKKR
ASGGSTSCAPAFSSLLAASPMAFSPVKSSLPIFTEKPGNFLAVAGSNLMEIPPGLEILRSVDSNGNTGEQRTERLFKLQKILKHLDESDQKGVIELVLHSLPPSELSNFA
INLEKRSMHLSMRGPFAISATTAREDELVDWLVEQPADIEQTSIP