CuGenDBv2

Gene ID	Lsi08G007930
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr08:16328430..16329677
RNA-Seq Expression	Lsi08G007930
Synteny	Lsi08G007930
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144237.1 uncharacterized protein LOC101215930 [Cucumis sativus]

6.3e-87

87.74

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Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPP+ARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQK  R SDLQESELRPEYRTISCELRALASMVRMELGCEE E+   GDK SVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG
        FERGR YDEYSARRNERL KRKKAESV E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE  PRYLLRSM KENKKPPLPVNLEKS I  G
Subjt:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG

Query:  EKKMVTRRVRRI
        E+KMVTRR RRI
Subjt:  EKKMVTRRVRRI

XP_008464847.1 PREDICTED: uncharacterized protein LOC103502623 [Cucumis melo]

6.7e-89

89.15

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Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPEYRTISCELRALASMVRMELGC ESE    GDKLSVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG
        FERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  G
Subjt:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG

Query:  EKKMVTRRVRRI
        E+KMVTRR RRI
Subjt:  EKKMVTRRVRRI

XP_022946511.1 uncharacterized protein LOC111450549 [Cucurbita moschata]

1.5e-88

88.63

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Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNS TSMQTPPGSLTKS KM R SDLQE+ELRPEYRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE
        FERGRFYDEYSARRNERLKRKKAES +E KTPY LGVTVESSKRHSSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE

Query:  KKMVTRRVRRI
        +K+ TR+VRRI
Subjt:  KKMVTRRVRRI

XP_023546758.1 uncharacterized protein LOC111805770 [Cucurbita pepo subsp. pepo]

3.3e-88

88.15

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Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNS TSMQTPPGSLTKS KM R SDLQE+ELRPEYRTISCELRAL SMV+MELGCEESE G  GDKLSVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE
        FERGRFYDEYSARRNERLKRKKAES +E KTPY LGVTVESSKRHSSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE

Query:  KKMVTRRVRRI
        +K+ TR++RRI
Subjt:  KKMVTRRVRRI

XP_038886147.1 uncharacterized protein LOC120076404 [Benincasa hispida]

8.5e-92

90.52

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Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNST SMQTPPGSLTKSQKMNR  DLQESELRPEYR ISCELRALASMVRMELGCEESENG  GDKL+VNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE
        FERGRFYD YSARRNERLKRKKAESV E KTP+NLGVTVESSKRHSSKKL NSLRKSVSAAYSVERSE APRYLLRSMTKENKKPPLPVNLEKSVI AGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE

Query:  KKMVTRRVRRI
        +K+  RR RRI
Subjt:  KKMVTRRVRRI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIG5 Uncharacterized protein

3.0e-87

87.74

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Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPP+ARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQK  R SDLQESELRPEYRTISCELRALASMVRMELGCEE E+   GDK SVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG
        FERGR YDEYSARRNERL KRKKAESV E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE  PRYLLRSM KENKKPPLPVNLEKS I  G
Subjt:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG

Query:  EKKMVTRRVRRI
        E+KMVTRR RRI
Subjt:  EKKMVTRRVRRI

A0A1S3CME4 uncharacterized protein LOC103502623

3.2e-89

89.15

Show/hide

Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPEYRTISCELRALASMVRMELGC ESE    GDKLSVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG
        FERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  G
Subjt:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG

Query:  EKKMVTRRVRRI
        E+KMVTRR RRI
Subjt:  EKKMVTRRVRRI

A0A5A7T4P2 Uncharacterized protein

3.2e-89

89.15

Show/hide

Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPEYRTISCELRALASMVRMELGC ESE    GDKLSVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG
        FERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  G
Subjt:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG

Query:  EKKMVTRRVRRI
        E+KMVTRR RRI
Subjt:  EKKMVTRRVRRI

A0A6J1G3W4 uncharacterized protein LOC111450549

7.2e-89

88.63

Show/hide

Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNS TSMQTPPGSLTKS KM R SDLQE+ELRPEYRTISCELRALASMV+MELGCEESE G  GD+LSVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE
        FERGRFYDEYSARRNERLKRKKAES +E KTPY LGVTVESSKRHSSKKLANSLRKSV AA+SVE+S AAPRYLLRSMTKENKKPPLPVNLEKSVI AGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGE

Query:  KKMVTRRVRRI
        +K+ TR+VRRI
Subjt:  KKMVTRRVRRI

E5GBZ2 Uncharacterized protein

3.2e-89

89.15

Show/hide

Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL
        MSK+RSDRRPPLARSPLRLRSRRVPQSNSTTS+QTPPGSLTKSQKM R SDLQESELRPEYRTISCELRALASMVRMELGC ESE    GDKLSVNSSSL
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSL

Query:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG
        FERGRFYDEYSARRNERL KRKKAE+V E KTPYNLGVTVESSKR SSKKL NSLRKSVSAAYS ERSE APRYLLRSM KENKKPPLPVNLEKS+I  G
Subjt:  FERGRFYDEYSARRNERL-KRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAG

Query:  EKKMVTRRVRRI
        E+KMVTRR RRI
Subjt:  EKKMVTRRVRRI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G42330.1 unknown protein

2.3e-31

46.19

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Query:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTP-PGSLTKSQKMNRTSDLQESELRP----EYRTISCELRALASMVRMELGCEESENGEGG-DKLS
        MSK+RS  +PPL +SP+RLRSR+V  S    S+QTP PG L   ++      L + +L P    +Y +IS E+ ALA MV+ E   EE        + L+
Subjt:  MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTP-PGSLTKSQKMNRTSDLQESELRP----EYRTISCELRALASMVRMELGCEESENGEGG-DKLS

Query:  VNSSSLFERGRFYDEYSARRNERLKRKKAESVTE----SKTPYNLGVTVE--SSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLP
         NS  LFERGRFY+EYSA+RNERL+RKK E   E      TPYNLGV  E  ++KR  + K   S++K+V    S+  S + PRY LRSM KEN+KPPLP
Subjt:  VNSSSLFERGRFYDEYSARRNERLKRKKAESVTE----SKTPYNLGVTVE--SSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLP

Query:  VNLEKSVIDAGEKKMVTRRVRRI
        +N+  S +    K + TR+ RRI
Subjt:  VNLEKSVIDAGEKKMVTRRVRRI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTAAGCTGAGATCTGATCGCAGGCCGCCGCTAGCCAGATCGCCCTTGCGTCTCCGATCTCGCCGGGTTCCTCAATCCAATTCAACAACCTCGATGCAAACGCCGCC
CGGTTCTTTGACCAAATCGCAGAAAATGAACCGTACTTCGGATCTGCAAGAATCGGAACTCCGACCTGAGTACCGGACGATTTCTTGCGAATTACGGGCTCTGGCAAGCA
TGGTTAGGATGGAATTAGGATGTGAAGAATCTGAAAACGGCGAAGGAGGCGATAAATTGAGCGTGAATTCGAGTTCTCTGTTCGAGCGAGGGAGATTTTACGACGAGTAC
TCCGCAAGGAGGAACGAGAGGCTTAAAAGGAAGAAAGCAGAATCCGTGACGGAGAGCAAGACTCCGTACAATCTCGGCGTAACGGTTGAATCTTCGAAACGTCACAGTTC
AAAGAAGCTTGCAAATAGCTTGAGGAAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAGCGAGGCGGCTCCTAGGTATTTGCTGCGTAGCATGACGAAGGAGAATAAGA
AGCCTCCATTGCCGGTGAATCTAGAGAAATCAGTGATTGATGCAGGAGAAAAGAAAATGGTCACTCGAAGAGTCCGAAGAATCTGA

mRNA sequence

Show/hide mRNA sequence

AATTTATCGAAAAATAAATAGATAAATCTCACACGGCTGCCAGGTCAGCCTCCCATGTAGAGTTCAAAAAATATGACCGTTGGGGACGCTCCTCTCATTTAAATCTCAAT
TCAAACCCATCGCCAAAAATCTGCAACCAAACGTATCTTCTTCACAGATTTTAACGAGAAAATAGCACTCTTATCTCTCTCTATTTCATCCCTTTGCATTTCCCCATCGA
TTTCCTACATCCATGTCTAAGCTGAGATCTGATCGCAGGCCGCCGCTAGCCAGATCGCCCTTGCGTCTCCGATCTCGCCGGGTTCCTCAATCCAATTCAACAACCTCGAT
GCAAACGCCGCCCGGTTCTTTGACCAAATCGCAGAAAATGAACCGTACTTCGGATCTGCAAGAATCGGAACTCCGACCTGAGTACCGGACGATTTCTTGCGAATTACGGG
CTCTGGCAAGCATGGTTAGGATGGAATTAGGATGTGAAGAATCTGAAAACGGCGAAGGAGGCGATAAATTGAGCGTGAATTCGAGTTCTCTGTTCGAGCGAGGGAGATTT
TACGACGAGTACTCCGCAAGGAGGAACGAGAGGCTTAAAAGGAAGAAAGCAGAATCCGTGACGGAGAGCAAGACTCCGTACAATCTCGGCGTAACGGTTGAATCTTCGAA
ACGTCACAGTTCAAAGAAGCTTGCAAATAGCTTGAGGAAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAGCGAGGCGGCTCCTAGGTATTTGCTGCGTAGCATGACGA
AGGAGAATAAGAAGCCTCCATTGCCGGTGAATCTAGAGAAATCAGTGATTGATGCAGGAGAAAAGAAAATGGTCACTCGAAGAGTCCGAAGAATCTGAAGAATTAGGGAT
CAGATGTTGGCGTCAGGTGGAATTATAGTTTTCCTCCTTTCGTTATCTTTCCTTATTGATCTTTATTTCAGATGATGGTTAAAGAAACTGGATTTTTTTTTTATTATTAT
TATTTGTGTTTGGATTTGGATAGGATTTTTATGTACTGTAAATGTTGGGTTTGCTTTAGAATTTTCCAATTCGGAAATATCTGACCACATTTAGCTGCTGCTATGATGAG
ACAGAGAGGCATAGAGCATATTAGTTTTTAGGGTTTTTTTTTTTTTTAAGT

Protein sequence

Show/hide protein sequence

MSKLRSDRRPPLARSPLRLRSRRVPQSNSTTSMQTPPGSLTKSQKMNRTSDLQESELRPEYRTISCELRALASMVRMELGCEESENGEGGDKLSVNSSSLFERGRFYDEY
SARRNERLKRKKAESVTESKTPYNLGVTVESSKRHSSKKLANSLRKSVSAAYSVERSEAAPRYLLRSMTKENKKPPLPVNLEKSVIDAGEKKMVTRRVRRI

Lsi08G007930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome