; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G007940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G007940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:16332349..16337345
RNA-Seq ExpressionLsi08G007940
SyntenyLsi08G007940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584228.1 hypothetical protein SDJN03_20160, partial [Cucurbita argyrosperma subsp. sororia]3.5e-0661.9Show/hide
Query:  MMMSLKSLRLMKSGKS-RKAKKLLSSGKMTGMMMMLMMTSRCSLRENWRTMLRKNEETLGTSF
        MMMS KSLRLMK+GKS +K +KL SSGK TGM MM M TS CS  ENWR   R+NE+    S+
Subjt:  MMMSLKSLRLMKSGKS-RKAKKLLSSGKMTGMMMMLMMTSRCSLRENWRTMLRKNEETLGTSF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGAAGGCAAAGAAATTACTCAGCAGTGGGAAGATGACTGGGATGATGATGATGTTAATGAT
GACTTCTCGTTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGAAGAGACTCTAGGCACTTCCTTTTTATCTGCCAACATCTATGTTTTATTTGCGCTGT
TTGACCTTCAAGATGGTTTTATTATGCCTTCTATCTCTCAAATATTGTCATTAATATGCTCAGAAGCCCGAATTGGAAACATTATTAGCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATCGGCTCGCCGACTTGTCCCTCAAGATATCTCGATTCATTTTTTCCAATAGAAATCAGGCAACTCGAGACTCCCTCGATCTTCCCTGCTCGACGGCTCTCTCACAAATA
CTCTCCCAAGAATACTAAAGATTTGTAGATCAAAGTGAGCTTTGTGATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGATG
AGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGAAGGCAAAGAAATTACTCAGCAGTGGGAAGATGACTGGGATGATGATGATGTTAATGATGACTTCTCG
TTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGAAGAGACTCTAGGCACTTCCTTTTTATCTGCCAACATCTATGTTTTATTTGCGCTGTTTGACCTTC
AAGATGGTTTTATTATGCCTTCTATCTCTCAAATATTGTCATTAATATGCTCAGAAGCCCGAATTGGAAACATTATTAGCATTTAAGATCAGCATATTGAACACCTATGG
CCGTTGGCCCAGGAGATAAGGCATTCAGTTAATTTAGTGATAATCCTTGCTTTTACAATTCACTTCACTTTCAAGATTTGTCAAGTTATTTAAGTTATCGGAACAATTAC
AGTTATAATTTCGTTGTAATTCTATGGTAGTCGCCTATTTAAATTTTATGAATTTTCTGTGATCGAGTAATTGTTCTATGACATTAACTAATGTATCAGTAAGCTCATTA
TGTATTGTCTTG
Protein sequenceShow/hide protein sequence
MMMSLKSLRLMKSGKSRKAKKLLSSGKMTGMMMMLMMTSRCSLRENWRTMLRKNEETLGTSFLSANIYVLFALFDLQDGFIMPSISQILSLICSEARIGNIISI