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Lsi08G008440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G008440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat-containing protein-like
Genome locationchr08:16875442..16878146
RNA-Seq ExpressionLsi08G008440
SyntenyLsi08G008440
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064715.1 ankyrin repeat-containing protein ITN1-like [Cucumis melo var. makuwa]1.5e-4665.52Show/hide
Query:  MASRLEE-EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL
        MASR+EE E  T+AAE+Q  SEKSWQK+D E LMV+ITFI T SFQAGTNPPGGVWQD +    EAGKSIMASK+PSQFL FIVGV+TAMV+SA Q++ L
Subjt:  MASRLEE-EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL

Query:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC
        +NELPY KLS SRNF+Y SLG     +G AY SSVTALTP S ++EV  ALL+ L +G V + I+  IQK  VC
Subjt:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC

KGN47594.1 hypothetical protein Csa_019055 [Cucumis sativus]4.8e-4564Show/hide
Query:  MASRLEE--EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLV
        MASR+EE  E  T+AAE+Q  SEK+ QK+D E LMV+ITFI T SFQAGTNPPGGVWQ+      EAGKSIMASK+PSQF+ FIVGVT  MV+SA Q+L 
Subjt:  MASRLEE--EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLV

Query:  LINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC
        L+NELPY KLS SRNF+Y SLG+    +G AYWSS+TALTP S + EV I L++EL IGVV + I+  IQK  VC
Subjt:  LINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC

XP_016900016.1 PREDICTED: uncharacterized protein LOC103488514 [Cucumis melo]3.4e-4664.94Show/hide
Query:  MASRL-EEEAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL
        MASR+ E+E  T+AAE+Q  SEKSWQK+D E LMV+ITFI T SFQAGTNPPGGVWQD +    EAGKSIMASK+PSQFL FIVGV+TAMV+SA Q++ L
Subjt:  MASRL-EEEAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL

Query:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC
        +NELPY KLS SRNF+Y SLG     +G AY SSVTALTP S ++EV  ALL+ L +G V + I+  IQK  VC
Subjt:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC

XP_022973456.1 uncharacterized protein LOC111471995 [Cucurbita maxima]3.6e-3250.87Show/hide
Query:  MASRLEEEAPTL---AAEDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVW-QDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVL
        MASRLEEEAP       EDQ  E++WQK DRE+L+V++TF+AT +FQAG +PPGGVW QDD N    AG SIMA+K P++F  FIVGVT  M+VS +Q +
Subjt:  MASRLEEEAPTL---AAEDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVW-QDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVL

Query:  VLINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKI
        VL+NELP    S+SR ++Y++L  A   M S+Y SSV A TP+  +      L+  +  GVV + I    QKI
Subjt:  VLINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKI

XP_038884849.1 uncharacterized protein LOC120075488 isoform X1 [Benincasa hispida]6.3e-4566.27Show/hide
Query:  MASRLEEEAPTLAAEDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLIN
        MASRL+EEAP+ AAEDQ SEKSWQKSDREFLM+MITF+AT    AG   P  V    T P   AGKSIMASKHPSQF+AFI GVTTAMVVS MQ+ VLIN
Subjt:  MASRLEEEAPTLAAEDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLIN

Query:  ELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKI
         LPY K SVSRNF+YF++G+A   MG+AYW+SVT LT   QL ++   LL   V GVVGL IL C+QKI
Subjt:  ELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKI

TrEMBL top hitse value%identityAlignment
A0A0A0KFJ5 PGG domain-containing protein2.3e-4564Show/hide
Query:  MASRLEE--EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLV
        MASR+EE  E  T+AAE+Q  SEK+ QK+D E LMV+ITFI T SFQAGTNPPGGVWQ+      EAGKSIMASK+PSQF+ FIVGVT  MV+SA Q+L 
Subjt:  MASRLEE--EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLV

Query:  LINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC
        L+NELPY KLS SRNF+Y SLG+    +G AYWSS+TALTP S + EV I L++EL IGVV + I+  IQK  VC
Subjt:  LINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC

A0A1S4DVA8 uncharacterized protein LOC1079907053.9e-3246.11Show/hide
Query:  MASRLEEEA-------PTLAAEDQISEKSWQKS-----DREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAM
        M+ ++E+E+        T+  +D+ ++K  +K      DR+FLMV  TFIA  +FQAGTNPPGGVWQDD +P YEAGKSIMA+K PS F++F+ GVT   
Subjt:  MASRLEEEA-------PTLAAEDQISEKSWQKS-----DREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAM

Query:  VVSAMQVLVLINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQK
          SAMQ +VL+ +   K  SVS++F+YF++G     +  AYWS++ ALTP++Q+  V + L + LV+ VV L I   I+K
Subjt:  VVSAMQVLVLINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQK

A0A1S4DVK4 uncharacterized protein LOC1034885141.6e-4664.94Show/hide
Query:  MASRL-EEEAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL
        MASR+ E+E  T+AAE+Q  SEKSWQK+D E LMV+ITFI T SFQAGTNPPGGVWQD +    EAGKSIMASK+PSQFL FIVGV+TAMV+SA Q++ L
Subjt:  MASRL-EEEAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL

Query:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC
        +NELPY KLS SRNF+Y SLG     +G AY SSVTALTP S ++EV  ALL+ L +G V + I+  IQK  VC
Subjt:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC

A0A5A7VFP9 Ankyrin repeat-containing protein ITN1-like7.3e-4765.52Show/hide
Query:  MASRLEE-EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL
        MASR+EE E  T+AAE+Q  SEKSWQK+D E LMV+ITFI T SFQAGTNPPGGVWQD +    EAGKSIMASK+PSQFL FIVGV+TAMV+SA Q++ L
Subjt:  MASRLEE-EAPTLAAEDQI-SEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVL

Query:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC
        +NELPY KLS SRNF+Y SLG     +G AY SSVTALTP S ++EV  ALL+ L +G V + I+  IQK  VC
Subjt:  INELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC

A0A6J1I8P6 uncharacterized protein LOC1114719951.7e-3250.87Show/hide
Query:  MASRLEEEAPTL---AAEDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVW-QDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVL
        MASRLEEEAP       EDQ  E++WQK DRE+L+V++TF+AT +FQAG +PPGGVW QDD N    AG SIMA+K P++F  FIVGVT  M+VS +Q +
Subjt:  MASRLEEEAPTL---AAEDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVW-QDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVL

Query:  VLINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKI
        VL+NELP    S+SR ++Y++L  A   M S+Y SSV A TP+  +      L+  +  GVV + I    QKI
Subjt:  VLINELPYKKLSVSRNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34050.1 Ankyrin repeat family protein7.5e-0425.74Show/hide
Query:  REFLMVMITFIATASFQAGTNPPGGVWQDDT-NPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYKKLSVSRNFVYFS---LGLAFF
        R  + ++   IA+ +F  G NPPGGV+Q+     +  AG+++        F  F +    A+  S   V++L++ +PY+   + +NF+  +   L +A  
Subjt:  REFLMVMITFIATASFQAGTNPPGGVWQDDT-NPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYKKLSVSRNFVYFS---LGLAFF

Query:  GMGSAYWSSVTALTPKSQLEE---VTIALLSELVIG
         M  AY S+ + + P  + +     T+  +S L++G
Subjt:  GMGSAYWSSVTALTPKSQLEE---VTIALLSELVIG

AT4G11000.1 Ankyrin repeat family protein3.6e-0636.96Show/hide
Query:  EKSWQKSD-REFLMVMITFIATASFQAGTNPPGGVWQDDTNPRY--EAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLIN-ELPYKKL
        ++S   SD R  ++V+   I TA++QAG +PPGG WQD  + RY   AG+  M    P  +  F +G+     VS++ V+++I   LP  KL
Subjt:  EKSWQKSD-REFLMVMITFIATASFQAGTNPPGGVWQDDTNPRY--EAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLIN-ELPYKKL

AT5G50140.1 Ankyrin repeat family protein7.5e-0425.64Show/hide
Query:  EDQISEKSWQ----KSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYKKLSVS
        E +I EK  Q    ++ R  + V+   IA+ +F  G NPPGGV+QD     +  GK+         F  F V  + A+  S   V++L++ +P++  S+ 
Subjt:  EDQISEKSWQ----KSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYKKLSVS

Query:  RNFV--YFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILF
           +  +  + LA   M SAY +      P S+  +  +     +   ++G + +F
Subjt:  RNFV--YFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILF

AT5G51160.1 Ankyrin repeat family protein1.1e-0531.13Show/hide
Query:  REFLMVMITFIATASFQAGTNPPGGVWQDDTNP---------------RYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYK-KLSVSR
        R  L+V+ + +ATA+FQA   PPGG WQD + P                + AG+SIM + +   F  F+   T    VS   + +L    P + +L +  
Subjt:  REFLMVMITFIATASFQAGTNPPGGVWQDDTNP---------------RYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYK-KLSVSR

Query:  NFVYFS
          +YFS
Subjt:  NFVYFS

AT5G54700.1 Ankyrin repeat family protein3.1e-0529Show/hide
Query:  EDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYKKLSVSRNFV
        E+ +      ++ R  + V+   IA+ +F  G NPPGG++Q+ T+ +   GKS+ A      F  F V  + A+  S   V++L++ +P+K  S+    V
Subjt:  EDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYKKLSVSRNFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTAGGCTTGAGGAAGAAGCACCAACCCTAGCAGCTGAAGATCAAATCTCAGAGAAGTCTTGGCAGAAGAGTGATAGAGAATTTCTAATGGTAATGATAACTTT
CATCGCAACCGCTTCTTTTCAAGCCGGGACGAACCCTCCTGGTGGCGTTTGGCAAGACGATACCAACCCCAGGTATGAAGCAGGGAAATCGATAATGGCCTCAAAACACC
CATCTCAGTTCTTGGCTTTCATCGTCGGAGTAACAACGGCGATGGTAGTTTCAGCGATGCAAGTTTTGGTGCTGATTAATGAGTTGCCTTACAAGAAACTCTCCGTTTCC
AGGAACTTTGTCTACTTTTCTTTGGGCCTCGCATTTTTCGGCATGGGATCTGCTTACTGGTCGTCGGTAACAGCTTTGACGCCGAAGTCGCAGTTGGAGGAGGTCACCAT
TGCGCTGCTCTCTGAGCTTGTGATTGGTGTCGTTGGACTCCTGATTTTATTTTGCATACAGAAGATACATGTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
AATGGAGAAACAACATCCACAAATGTCCTTAACAATATCTATTAATTCATGTGTCTTTGTTGTAGCCTAGTGCCAAAGTTTATAGGGCATTATTGATCTTTCACAAGACA
AAGATCATCAGATTGATCAGCCATGGCAAGTAGGCTTGAGGAAGAAGCACCAACCCTAGCAGCTGAAGATCAAATCTCAGAGAAGTCTTGGCAGAAGAGTGATAGAGAAT
TTCTAATGGTAATGATAACTTTCATCGCAACCGCTTCTTTTCAAGCCGGGACGAACCCTCCTGGTGGCGTTTGGCAAGACGATACCAACCCCAGGTATGAAGCAGGGAAA
TCGATAATGGCCTCAAAACACCCATCTCAGTTCTTGGCTTTCATCGTCGGAGTAACAACGGCGATGGTAGTTTCAGCGATGCAAGTTTTGGTGCTGATTAATGAGTTGCC
TTACAAGAAACTCTCCGTTTCCAGGAACTTTGTCTACTTTTCTTTGGGCCTCGCATTTTTCGGCATGGGATCTGCTTACTGGTCGTCGGTAACAGCTTTGACGCCGAAGT
CGCAGTTGGAGGAGGTCACCATTGCGCTGCTCTCTGAGCTTGTGATTGGTGTCGTTGGACTCCTGATTTTATTTTGCATACAGAAGATACATGTCTGTTAATTAACTCTC
TTCATTTAAAAAAATAATGTCTTTAAATGGTTAAAAGTTAGTATATTAATTACTTCTCAACTTTCGTACCCGTTTCAAAATTATATTTGGTATAAAAAATGAATGGAAAT
TTCTACTCTAATGATAGTTTTGAAATAATTATAAAGAGAGTAATATTCCAACTTTTAAAAGTATATGATAGTTGTTGATGCCAAATTTGGAAAAACAGAAAGACCTTCAC
GTGACAGCAGCAGTAAATTTGTTTGAAGAGGAGAAAGACGTGGCCTGCAAAAGAGAAAACTTGCACACCGATGTGGTGCTTGCCACACACTCCCATGCTTAAGCTAGAGA
GTGAAAGAGTGTGGAAGTTAGAAAGTTTGAGAGTAGACTCCAGTTATCTCATATGAAGATATTAGGATGAATTTAGAGAGAAAGTTGACCCAGAGTTCTCTAGGGTTTCC
GAGTTGCTTTAAGATAAGTAGATAATTTTTCGGGCCAAGGGTGTGTTTGGTTTTGCCTTAGGCTAGGGTCGGCCTCGGTCTCGCGTCTCCATTAGGCCATATCTTGGGCC
TAAAATACTGCT
Protein sequenceShow/hide protein sequence
MASRLEEEAPTLAAEDQISEKSWQKSDREFLMVMITFIATASFQAGTNPPGGVWQDDTNPRYEAGKSIMASKHPSQFLAFIVGVTTAMVVSAMQVLVLINELPYKKLSVS
RNFVYFSLGLAFFGMGSAYWSSVTALTPKSQLEEVTIALLSELVIGVVGLLILFCIQKIHVC