; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G008490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G008490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationchr08:16917774..16921156
RNA-Seq ExpressionLsi08G008490
SyntenyLsi08G008490
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445596.1 PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]3.4e-7778.76Show/hide
Query:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA
        MSRQ+ G E   S+AI+ID+    H + +     NW+REDTDFLMVVTTF+ATVAFQIGTNPPGGVWQ+DDKQGKYFAGKSIMATKSPS+FSG+LVTITA
Subjt:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA

Query:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS
        CFV SA+QFAVLFLKKWP   K+WS SRFILYSTMGLAISSMGI+YGCSVRAYTPDSEE TR VISFITMLGFP+GLAAISLYL++ NKSSSS
Subjt:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS

XP_011657373.1 uncharacterized protein LOC105435852 [Cucumis sativus]6.6e-7375.13Show/hide
Query:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA
        MSRQ+    E+ ++ I     TG H + +     NWMREDTDFLMVVTTF+ATVAFQIGTNPPGGVWQ+DDKQGKYFAGKSIMATKSPS+F GFLVTITA
Subjt:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA

Query:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS
        CFV SA+QFAVLFLKKWP   K+WS SRFILYSTMGLA+SSMG +YGCSVRAYTPDSEE T  VISFITMLGFP+ LAAIS+YLQ+ +KSSSS
Subjt:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS

XP_016899921.1 PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]4.1e-3045.9Show/hide
Query:  SKGVEETASLAISIDSVTGNHREAEN---KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITAC
        S+ VE+ + L+I  D  T N ++ EN   KK       D DFLMV TTF+A +AFQ GTNPPGGVWQDD+    Y AGKSIMATKSPS F  F+  +T C
Subjt:  SKGVEETASLAISIDSVTGNHREAEN---KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITAC

Query:  FVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ
        F  SA+QF VL  K   +EKSWSVS+  +Y TMG  IS++ ++Y  +++A TP++ + +  ++   T L   + +  IS+Y++
Subjt:  FVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ

XP_022949196.1 uncharacterized protein LOC111452618 [Cucurbita moschata]2.9e-2847.53Show/hide
Query:  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKS
        GN  E +NK+   W + D ++L++V TF+ATVAFQ G +PPGGVWQ DDK     AG SIMATK P+EF+ F+V +T C ++S LQF VLF+ + P++  
Subjt:  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKS

Query:  WSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ
         S+SR  LY T+  A+ SM  SY  SV+AYTP+S  T    +  +T +G  + L  ISL+ Q
Subjt:  WSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ

XP_022973456.1 uncharacterized protein LOC111471995 [Cucurbita maxima]2.9e-2847.59Show/hide
Query:  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKS
        GN RE +NK+   W + D ++L+VV TF+ATVAFQ G +PPGGVWQ DDK     AG SIMATK P+EF+ F+V +T C ++S LQF VL L + P++  
Subjt:  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKS

Query:  WSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNK
         S+SR  LY T+  A+ SM  SY  SV+AYTP+     R V   +  +G  + L  ISL+ Q + K
Subjt:  WSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNK

TrEMBL top hitse value%identityAlignment
A0A0A0KGU1 PGG domain-containing protein3.2e-7375.13Show/hide
Query:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA
        MSRQ+    E+ ++ I     TG H + +     NWMREDTDFLMVVTTF+ATVAFQIGTNPPGGVWQ+DDKQGKYFAGKSIMATKSPS+F GFLVTITA
Subjt:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA

Query:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS
        CFV SA+QFAVLFLKKWP   K+WS SRFILYSTMGLA+SSMG +YGCSVRAYTPDSEE T  VISFITMLGFP+ LAAIS+YLQ+ +KSSSS
Subjt:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS

A0A1S3BD33 uncharacterized protein LOC1034885761.6e-7778.76Show/hide
Query:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA
        MSRQ+ G E   S+AI+ID+    H + +     NW+REDTDFLMVVTTF+ATVAFQIGTNPPGGVWQ+DDKQGKYFAGKSIMATKSPS+FSG+LVTITA
Subjt:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA

Query:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS
        CFV SA+QFAVLFLKKWP   K+WS SRFILYSTMGLAISSMGI+YGCSVRAYTPDSEE TR VISFITMLGFP+GLAAISLYL++ NKSSSS
Subjt:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS

A0A1S4DVA8 uncharacterized protein LOC1079907052.0e-3045.9Show/hide
Query:  SKGVEETASLAISIDSVTGNHREAEN---KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITAC
        S+ VE+ + L+I  D  T N ++ EN   KK       D DFLMV TTF+A +AFQ GTNPPGGVWQDD+    Y AGKSIMATKSPS F  F+  +T C
Subjt:  SKGVEETASLAISIDSVTGNHREAEN---KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITAC

Query:  FVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ
        F  SA+QF VL  K   +EKSWSVS+  +Y TMG  IS++ ++Y  +++A TP++ + +  ++   T L   + +  IS+Y++
Subjt:  FVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ

A0A5A7VAU9 Ankyrin repeat-containing protein1.6e-7778.76Show/hide
Query:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA
        MSRQ+ G E   S+AI+ID+    H + +     NW+REDTDFLMVVTTF+ATVAFQIGTNPPGGVWQ+DDKQGKYFAGKSIMATKSPS+FSG+LVTITA
Subjt:  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITA

Query:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS
        CFV SA+QFAVLFLKKWP   K+WS SRFILYSTMGLAISSMGI+YGCSVRAYTPDSEE TR VISFITMLGFP+GLAAISLYL++ NKSSSS
Subjt:  CFVLSALQFAVLFLKKWP-AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSS

A0A6J1I8P6 uncharacterized protein LOC1114719951.4e-2847.59Show/hide
Query:  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKS
        GN RE +NK+   W + D ++L+VV TF+ATVAFQ G +PPGGVWQ DDK     AG SIMATK P+EF+ F+V +T C ++S LQF VL L + P++  
Subjt:  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKS

Query:  WSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNK
         S+SR  LY T+  A+ SM  SY  SV+AYTP+     R V   +  +G  + L  ISL+ Q + K
Subjt:  WSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34050.1 Ankyrin repeat family protein1.1e-0425.58Show/hide
Query:  ENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRF
        E+K     +    + + +V   +A+VAF  G NPPGGV+Q+   +GK  AG++ +A +  S  +   +  + C V+  L  +++  +  P +    ++  
Subjt:  ENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRF

Query:  ILYSTMGLAISSMGISYGCSVRAYTPDSE
        IL+    +A++SM ++Y  +     P  E
Subjt:  ILYSTMGLAISSMGISYGCSVRAYTPDSE

AT3G13950.1 unknown protein2.6e-0646.34Show/hide
Query:  KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDD
        K+ G+W+ +    LMV  T +A ++FQ+  NPPGGVWQ D+
Subjt:  KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDD

AT4G13266.1 unknown protein1.1e-0440.48Show/hide
Query:  GNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGK
        G+W+ +    L+V  T +A ++F +  NPPGGVWQ +D   K
Subjt:  GNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGK

AT5G54710.1 Ankyrin repeat family protein6.3e-0525.47Show/hide
Query:  REAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSV
        R  E +     ++   + + +V   +A+VAF  G NPPGGV QD    GK  AG++ +A K  S  +  +   T+  +++ L   + +       K+  +
Subjt:  REAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSV

Query:  SRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFL
           I +  M LA++SM  +Y  S     P +E +   V +   +    LG  ++ +Y+ F+
Subjt:  SRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAACTCATTTCAAATTCATTTGAGAGTTCTTGTAGCATTAATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAAC
TGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTG
GGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTG
GTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTC
AACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTA
TGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACAACTCATTTCAAATTCATTTGAGAGTTCTTGTAGCATTAATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAAC
TGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTG
GGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTG
GTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTC
AACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTA
TGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA
Protein sequenceShow/hide protein sequence
MHNSFQIHLRVLVALMSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFL
VTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSSS