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Lsi08G008500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G008500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat-containing protein-like
Genome locationchr08:16924109..16924672
RNA-Seq ExpressionLsi08G008500
SyntenyLsi08G008500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064719.1 ankyrin repeat-containing protein-like [Cucumis melo var. makuwa]7.1e-5886.11Show/hide
Query:  MVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYW
        MVATTFIAAMAFQAGTNPPGGVWQDDN+ P+YEAGKSIMATKSPS FISFMSGVT+CFACS MQF+VLL KSS K+WSVSKSF+YFTMGS IS+++VAYW
Subjt:  MVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYW

Query:  SAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR
        SAIKALTP+AQMS VIVMLKTTLVLS+V+LPISMYIEK+RLASR
Subjt:  SAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR

XP_008445596.1 PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]5.8e-2848.31Show/hide
Query:  EESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVM
        E   ++I+T +T +EK+    K     N    D DFLMV TTFIA +AFQ GTNPPGGVWQ+D+ +  Y AGKSIMATKSPS F  ++  +T CF  S M
Subjt:  EESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVM

Query:  QFMVLLVKS---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDA-QMSSVIVMLKTTLVLSIVLLPISMYIE
        QF VL +K     AK WS S+  LY TMG AISSM +AY  +++A TPD+ + +  ++   T L   I L  IS+Y+E
Subjt:  QFMVLLVKS---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDA-QMSSVIVMLKTTLVLSIVLLPISMYIE

XP_011657373.1 uncharacterized protein LOC105435852 [Cucumis sativus]2.2e-2748.82Show/hide
Query:  TDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVK
        T  T ++   E  K     N    D DFLMV TTFIA +AFQ GTNPPGGVWQ+D+ +  Y AGKSIMATKSPS FI F+  +T CF  S MQF VL +K
Subjt:  TDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVK

Query:  S---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSV-IVMLKTTLVLSIVLLPISMYIE
             AK WS S+  LY TMG A+SSM  AY  +++A TPD++ +++ ++   T L   I L  IS+Y++
Subjt:  S---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSV-IVMLKTTLVLSIVLLPISMYIE

XP_016899921.1 PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]3.2e-7483.96Show/hide
Query:  MTRKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLC
        M+RKVE+ESVLSIETDQT+NEKDKE++KKKKKK  +  DRDFLMVATTFIAAMAFQAGTNPPGGVWQDDN+ P+YEAGKSIMATKSPS FISFMSGVT+C
Subjt:  MTRKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLC

Query:  FACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR
        FACS MQF+VLL KSS K+WSVSKSF+YFTMGS IS+++VAYWSAIKALTP+AQMS VIVMLKTTLVLS+V+LPISMYIEK+RLASR
Subjt:  FACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR

XP_038884181.1 uncharacterized protein LOC120075089 [Benincasa hispida]5.0e-2744.09Show/hide
Query:  RKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDN--NKPDYEAGKSIMATKSPSQFISFMSGVTLC
        +K EE + +SI+T     E++   ++++  +   E D DF+MV  TFIA +AFQAGTNPPGGVWQ+D   N  DY AGKSIM TKSPS++I FM GVT+C
Subjt:  RKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDN--NKPDYEAGKSIMATKSPSQFISFMSGVTLC

Query:  FACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISM--YIEKRRL
         A SV+Q +V+L     K+WS+ ++ LY  M   I+ M+VA+WS++ ALTP   M+ +     + + +S+++LP  +  Y+ K+ L
Subjt:  FACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISM--YIEKRRL

TrEMBL top hitse value%identityAlignment
A0A0A0KGU1 PGG domain-containing protein1.1e-2748.82Show/hide
Query:  TDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVK
        T  T ++   E  K     N    D DFLMV TTFIA +AFQ GTNPPGGVWQ+D+ +  Y AGKSIMATKSPS FI F+  +T CF  S MQF VL +K
Subjt:  TDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVK

Query:  S---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSV-IVMLKTTLVLSIVLLPISMYIE
             AK WS S+  LY TMG A+SSM  AY  +++A TPD++ +++ ++   T L   I L  IS+Y++
Subjt:  S---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSV-IVMLKTTLVLSIVLLPISMYIE

A0A1S3BD33 uncharacterized protein LOC1034885762.8e-2848.31Show/hide
Query:  EESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVM
        E   ++I+T +T +EK+    K     N    D DFLMV TTFIA +AFQ GTNPPGGVWQ+D+ +  Y AGKSIMATKSPS F  ++  +T CF  S M
Subjt:  EESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVM

Query:  QFMVLLVKS---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDA-QMSSVIVMLKTTLVLSIVLLPISMYIE
        QF VL +K     AK WS S+  LY TMG AISSM +AY  +++A TPD+ + +  ++   T L   I L  IS+Y+E
Subjt:  QFMVLLVKS---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDA-QMSSVIVMLKTTLVLSIVLLPISMYIE

A0A1S4DVA8 uncharacterized protein LOC1079907051.5e-7483.96Show/hide
Query:  MTRKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLC
        M+RKVE+ESVLSIETDQT+NEKDKE++KKKKKK  +  DRDFLMVATTFIAAMAFQAGTNPPGGVWQDDN+ P+YEAGKSIMATKSPS FISFMSGVT+C
Subjt:  MTRKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLC

Query:  FACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR
        FACS MQF+VLL KSS K+WSVSKSF+YFTMGS IS+++VAYWSAIKALTP+AQMS VIVMLKTTLVLS+V+LPISMYIEK+RLASR
Subjt:  FACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR

A0A5A7VAU9 Ankyrin repeat-containing protein2.8e-2848.31Show/hide
Query:  EESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVM
        E   ++I+T +T +EK+    K     N    D DFLMV TTFIA +AFQ GTNPPGGVWQ+D+ +  Y AGKSIMATKSPS F  ++  +T CF  S M
Subjt:  EESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVM

Query:  QFMVLLVKS---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDA-QMSSVIVMLKTTLVLSIVLLPISMYIE
        QF VL +K     AK WS S+  LY TMG AISSM +AY  +++A TPD+ + +  ++   T L   I L  IS+Y+E
Subjt:  QFMVLLVKS---SAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDA-QMSSVIVMLKTTLVLSIVLLPISMYIE

A0A5D3BRK9 Ankyrin repeat-containing protein-like3.4e-5886.11Show/hide
Query:  MVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYW
        MVATTFIAAMAFQAGTNPPGGVWQDDN+ P+YEAGKSIMATKSPS FISFMSGVT+CFACS MQF+VLL KSS K+WSVSKSF+YFTMGS IS+++VAYW
Subjt:  MVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYW

Query:  SAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR
        SAIKALTP+AQMS VIVMLKTTLVLS+V+LPISMYIEK+RLASR
Subjt:  SAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGAAAGGTGGAAGAAGAATCAGTACTTTCAATAGAAACTGATCAAACTGTAAATGAAAAGGATAAAGAAGATGAGAAGAAGAAGAAGAAGAAGAATGAAGATGA
AGGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAACCCTCCCGGTGGCGTATGGCAAGACGACAACAACAAACCCG
ACTACGAAGCAGGCAAATCCATAATGGCTACAAAATCTCCTTCTCAATTCATCAGTTTCATGAGCGGCGTTACGCTATGCTTTGCGTGCTCAGTAATGCAGTTTATGGTG
TTGTTGGTTAAGTCATCTGCTAAAACGTGGTCGGTTTCTAAGAGTTTTCTTTACTTCACAATGGGCTCTGCAATATCATCCATGATTGTTGCTTATTGGTCCGCCATAAA
AGCTTTGACGCCTGACGCTCAAATGTCTAGTGTCATTGTTATGCTCAAAACTACCCTTGTTCTTAGCATTGTTTTGCTGCCAATTTCAATGTATATAGAGAAGAGACGAC
TTGCATCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAGAAAGGTGGAAGAAGAATCAGTACTTTCAATAGAAACTGATCAAACTGTAAATGAAAAGGATAAAGAAGATGAGAAGAAGAAGAAGAAGAAGAATGAAGATGA
AGGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAACCCTCCCGGTGGCGTATGGCAAGACGACAACAACAAACCCG
ACTACGAAGCAGGCAAATCCATAATGGCTACAAAATCTCCTTCTCAATTCATCAGTTTCATGAGCGGCGTTACGCTATGCTTTGCGTGCTCAGTAATGCAGTTTATGGTG
TTGTTGGTTAAGTCATCTGCTAAAACGTGGTCGGTTTCTAAGAGTTTTCTTTACTTCACAATGGGCTCTGCAATATCATCCATGATTGTTGCTTATTGGTCCGCCATAAA
AGCTTTGACGCCTGACGCTCAAATGTCTAGTGTCATTGTTATGCTCAAAACTACCCTTGTTCTTAGCATTGTTTTGCTGCCAATTTCAATGTATATAGAGAAGAGACGAC
TTGCATCTCGTTAG
Protein sequenceShow/hide protein sequence
MTRKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMV
LLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR