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Lsi08G008550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G008550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:16965911..16969141
RNA-Seq ExpressionLsi08G008550
SyntenyLsi08G008550
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK47583.1 unknown [Lotus japonicus]9.8e-2275.31Show/hide
Query:  ARFERYSAAAWAAGSIPIPLSEGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK
        ARF+R SAAA AAGS P PLSE    PFFL    IRFRA+SH SSFV+TSH PSLAR RHSSSFARGRN+TSGSG+IHGFK
Subjt:  ARFERYSAAAWAAGSIPIPLSEGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK

CAA2621196.1 unnamed protein product [Spirodela intermedia]9.8e-1460.76Show/hide
Query:  RYSAAAWAAGSIPIPLS--EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK
        RYSAAAWAAGS P+ LS     + PFFLCQ+RI  RA    SS V+TSH+PS+AR R SSSF R   +TSGSG+ HGF+
Subjt:  RYSAAAWAAGSIPIPLS--EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK

KAF7817361.1 17.3 kDa class II heat shock protein-like [Senna tora]5.5e-2579.01Show/hide
Query:  ARFERYSAAAWAAGSIPIPLSEGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK
        ARF+RYSAAA AAGS   PLSE K TPFFLC   IR RA+SH SSFVITSH+PSLAR RHSSSF RGRNITSGSG+IHGFK
Subjt:  ARFERYSAAAWAAGSIPIPLSEGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK

RDX67562.1 hypothetical protein CR513_53545, partial [Mucuna pruriens]8.8e-2379.27Show/hide
Query:  ARFERYSAAAWAAGSIPIPLS-EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK
        ARF+R+SAAA AAGSIP PLS EG   PFFL Q  IR RARSHTSSFVITSH+PSLAR RHSSSF RGRN+TSGSG+IHGFK
Subjt:  ARFERYSAAAWAAGSIPIPLS-EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK

TrEMBL top hitse value%identityAlignment
A0A371ENC5 Uncharacterized protein (Fragment)4.3e-2379.27Show/hide
Query:  ARFERYSAAAWAAGSIPIPLS-EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK
        ARF+R+SAAA AAGSIP PLS EG   PFFL Q  IR RARSHTSSFVITSH+PSLAR RHSSSF RGRN+TSGSG+IHGFK
Subjt:  ARFERYSAAAWAAGSIPIPLS-EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK

A0A7I8ISE8 Hypothetical protein4.7e-1460.76Show/hide
Query:  RYSAAAWAAGSIPIPLS--EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK
        RYSAAAWAAGS P+ LS     + PFFLCQ+RI  RA    SS V+TSH+PS+AR R SSSF R   +TSGSG+ HGF+
Subjt:  RYSAAAWAAGSIPIPLS--EGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK

I3T4Z1 Uncharacterized protein4.7e-2275.31Show/hide
Query:  ARFERYSAAAWAAGSIPIPLSEGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK
        ARF+R SAAA AAGS P PLSE    PFFL    IRFRA+SH SSFV+TSH PSLAR RHSSSFARGRN+TSGSG+IHGFK
Subjt:  ARFERYSAAAWAAGSIPIPLSEGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCGATTTGAGAGGTATTCTGCGGCCGCTTGGGCTGCGGGATCGATCCCCATCCCCCTCTCAGAAGGCAAACTGACGCCATTCTTCTTGTGCCAGAGTAGGATTCGTTT
TCGAGCCAGGTCGCATACCTCTTCATTTGTCATCACATCCCATAAACCGTCACTCGCTAGAACGAGGCATTCGTCGTCTTTCGCCCGAGGGAGGAACATCACTTCTGGCT
CTGGGATGATCCATGGTTTCAAGTCAAACTCAAACAGCATCCAAGTTTCTCCCACTCAACCTCAATGGACACATCTCAAGAATGTCAAGCCTAGAATCTTGACGGACAAT
AAAAAGTCTGATGGGAAAGATGCTTTGACTTGGAACCATTGGAACACTCTTCTTTATGTCCCCTGGACTACTTTGGCAAAGCAGCAAAAGATTGTTGGAGATATCATATC
ATTTGAAGTGACTAGCAAACTGGACTTAAAAATTCGTATAATTGCAACAACAGCAGTGGAGCCAACAGTTTCCGGCGCAACAGGCTCAACACCAGGTCCCCCTCCAATTT
CAGCATCAACTTTTAGAAAACATTTGGTGAATGCCTTTCTCCATAGCTCTTGGCAATTATCCTTCATATTGCCAACAGCTATTTCTTGCTTAGCAAGTTCTATCTCCTCA
GATAAAGCCAAATGCATACGTTCACGACAAAAATTTGCGACCTATATATTAAGAGATTTGAGTTATAACAACAGTATCAGTGCCTTGTTTGAGCCATCAAGAACTCGGTC
GCCAACAAGCATTTGGACAGGAAGTTCTGAAAACCTAGGTACAGTTGCCACTGCATCTTCCATCTCAGGTCTTCTTCCACAGACCGATGTAAATCCCCAAAGGGGAACAC
AATCTACCTCAAAAACACTTCGACTGACTGTAATACCAACCTCTTCCTCCCCATTAGTACTCTTACAATCATCAGAACCTACTTCAGTCAGGTCATCAGAAGCCTTAGTC
ACAGAATCAGATAACAAACCAGCAGTATCTGCCATTAGCTTAAGTCTTGTGATATCCATGGGGGTTGCCATGTTGGGGTTATCACAGACTGAATTACCTACCCTAAATGG
CACCACAACCGCTGGGGACATTTCCTCCATCAAATTCTCTACC
mRNA sequenceShow/hide mRNA sequence
GCTCGATTTGAGAGGTATTCTGCGGCCGCTTGGGCTGCGGGATCGATCCCCATCCCCCTCTCAGAAGGCAAACTGACGCCATTCTTCTTGTGCCAGAGTAGGATTCGTTT
TCGAGCCAGGTCGCATACCTCTTCATTTGTCATCACATCCCATAAACCGTCACTCGCTAGAACGAGGCATTCGTCGTCTTTCGCCCGAGGGAGGAACATCACTTCTGGCT
CTGGGATGATCCATGGTTTCAAGTCAAACTCAAACAGCATCCAAGTTTCTCCCACTCAACCTCAATGGACACATCTCAAGAATGTCAAGCCTAGAATCTTGACGGACAAT
AAAAAGTCTGATGGGAAAGATGCTTTGACTTGGAACCATTGGAACACTCTTCTTTATGTCCCCTGGACTACTTTGGCAAAGCAGCAAAAGATTGTTGGAGATATCATATC
ATTTGAAGTGACTAGCAAACTGGACTTAAAAATTCGTATAATTGCAACAACAGCAGTGGAGCCAACAGTTTCCGGCGCAACAGGCTCAACACCAGGTCCCCCTCCAATTT
CAGCATCAACTTTTAGAAAACATTTGGTGAATGCCTTTCTCCATAGCTCTTGGCAATTATCCTTCATATTGCCAACAGCTATTTCTTGCTTAGCAAGTTCTATCTCCTCA
GATAAAGCCAAATGCATACGTTCACGACAAAAATTTGCGACCTATATATTAAGAGATTTGAGTTATAACAACAGTATCAGTGCCTTGTTTGAGCCATCAAGAACTCGGTC
GCCAACAAGCATTTGGACAGGAAGTTCTGAAAACCTAGGTACAGTTGCCACTGCATCTTCCATCTCAGGTCTTCTTCCACAGACCGATGTAAATCCCCAAAGGGGAACAC
AATCTACCTCAAAAACACTTCGACTGACTGTAATACCAACCTCTTCCTCCCCATTAGTACTCTTACAATCATCAGAACCTACTTCAGTCAGGTCATCAGAAGCCTTAGTC
ACAGAATCAGATAACAAACCAGCAGTATCTGCCATTAGCTTAAGTCTTGTGATATCCATGGGGGTTGCCATGTTGGGGTTATCACAGACTGAATTACCTACCCTAAATGG
CACCACAACCGCTGGGGACATTTCCTCCATCAAATTCTCTACC
Protein sequenceShow/hide protein sequence
ARFERYSAAAWAAGSIPIPLSEGKLTPFFLCQSRIRFRARSHTSSFVITSHKPSLARTRHSSSFARGRNITSGSGMIHGFKSNSNSIQVSPTQPQWTHLKNVKPRILTDN
KKSDGKDALTWNHWNTLLYVPWTTLAKQQKIVGDIISFEVTSKLDLKIRIIATTAVEPTVSGATGSTPGPPPISASTFRKHLVNAFLHSSWQLSFILPTAISCLASSISS
DKAKCIRSRQKFATYILRDLSYNNSISALFEPSRTRSPTSIWTGSSENLGTVATASSISGLLPQTDVNPQRGTQSTSKTLRLTVIPTSSSPLVLLQSSEPTSVRSSEALV
TESDNKPAVSAISLSLVISMGVAMLGLSQTELPTLNGTTTAGDISSIKFST