CuGenDBv2

Gene ID	Lsi08G008690
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	60S ribosomal protein L17
Genome location	chr08:17071440..17073911
RNA-Seq Expression	Lsi08G008690
Synteny	Lsi08G008690
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001063 - Ribosomal protein L22/L17 IPR005721 - Ribosomal protein L22/L17, eukaryotic/archaeal IPR018260 - Ribosomal protein L22/L17, conserved site IPR036394 - Ribosomal protein L22/L17 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144196.1 60S ribosomal protein L17-2 [Cucumis sativus]

3.4e-97

99.45

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

XP_008445497.1 PREDICTED: 60S ribosomal protein L17-2-like [Cucumis melo]

4.9e-96

98.36

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Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

XP_022997268.1 60S ribosomal protein L17-2-like [Cucurbita maxima]

1.7e-96

99.45

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Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE VKKEPETQLATGKPKKGQALRSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

XP_023545223.1 60S ribosomal protein L17-2-like [Cucurbita pepo subsp. pepo]

9.9e-97

98.91

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Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

XP_038885177.1 60S ribosomal protein L17-2-like [Benincasa hispida]

4.4e-97

98.91

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Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BCV8 60S ribosomal protein L17-2-like

2.4e-96

98.36

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

A0A6J1BRY8 60S ribosomal protein L17-2-like

1.6e-97

99.45

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

A0A6J1HHD8 60S ribosomal protein L17-2-like

1.6e-97

99.45

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

A0A6J1KDD3 60S ribosomal protein L17-2-like

8.2e-97

99.45

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE VKKEPETQLATGKPKKGQALRSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

A0A6J1KKP7 60S ribosomal protein L17-2-like

1.0e-94

96.72

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLL NAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS
        SNAEVKGLDVDLLHVSH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK KKG+A+RSGASS
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

SwissProt top hits

e value

%identity

Alignment

O48557 60S ribosomal protein L17

3.0e-80

86.47

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EP NPTKS KA G DLRVHFKNTRETA A+RKLPL KAKRYLEDV+AHKQAIPFRR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK
        SNA+VKGLDVD L+VSH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKE +  +A  K
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK

P35266 60S ribosomal protein L17-1

1.4e-77

84.43

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS +P NPTKS KA G DLRVHFKNTRETA A+RK+PL KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA
        SNAEVKGLDVD L++SH+QVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE E+ +A
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA

P35267 60S ribosomal protein L17-2

6.9e-77

82.35

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSR+P NPTKS KA G DLRVHFKNTRETA A+R++PL KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK
        SNAEVKGLDVD L++SH+QVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE +  +A  K
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK

P51413 60S ribosomal protein L17-2

3.4e-84

88.64

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA
        SNAEVKGLDVD L +SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KK  A
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA

Q93VI3 60S ribosomal protein L17-1

5.8e-84

89.08

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARG+DLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKG
        SNAEVKGLDVD L +SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KKG
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKG

Arabidopsis top hits

e value

%identity

Alignment

AT1G27400.1 Ribosomal protein L22p/L17e family protein

4.2e-85

89.08

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARG+DLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKG
        SNAEVKGLDVD L +SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KKG
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKG

AT1G67430.1 Ribosomal protein L22p/L17e family protein

2.4e-85

88.64

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA
        SNAEVKGLDVD L +SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KK  A
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA

AT1G67430.2 Ribosomal protein L22p/L17e family protein

5.9e-55

67.05

Show/hide

Query:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA
        SNA                                            ELILSEKEEPVKKEPETQLA  K KK  A
Subjt:  SNAEVKGLDVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGAAGTATTCCAGGGAACCAGACAATCCCACCAAGTCCTGCAAAGCCCGTGGCTCGGACCTTAGAGTCCACTTTAAGAACACAAGGGAAACTGCCCATGCTATCAG
AAAGTTGCCACTGGCCAAGGCCAAGAGGTACTTAGAGGATGTGCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAA
AGAACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCTAAGTTTATTCTTGATTTGCTTAAGAATGCTGAGAGCAATGCTGAAGTTAAGGGTCTGGATGTT
GATTTGCTCCACGTATCTCACGTCCAGGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCTCATGGAAGAATCAATCCTTACATGTCTTCTCCTTGCCATAT
TGAGCTGATTTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGCCCGAGACTCAGCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCTCTCCGCAGTGGCGCTTCCTCTT
GA

mRNA sequence

Show/hide mRNA sequence

GTAGAGTTTGTCCCTCTCTTCTTATAAACCTAATTCAAGCATTTCCCTTCCTCTGTTCACGGCCAAATCCAACTTTTTCTTCACAAACCGAAGTTGCAGCCGTCGCCATG
GTGAAGTATTCCAGGGAACCAGACAATCCCACCAAGTCCTGCAAAGCCCGTGGCTCGGACCTTAGAGTCCACTTTAAGAACACAAGGGAAACTGCCCATGCTATCAGAAA
GTTGCCACTGGCCAAGGCCAAGAGGTACTTAGAGGATGTGCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGA
ACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCTAAGTTTATTCTTGATTTGCTTAAGAATGCTGAGAGCAATGCTGAAGTTAAGGGTCTGGATGTTGAT
TTGCTCCACGTATCTCACGTCCAGGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCTCATGGAAGAATCAATCCTTACATGTCTTCTCCTTGCCATATTGA
GCTGATTTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGCCCGAGACTCAGCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCTCTCCGCAGTGGCGCTTCCTCTTGAA
TGGCAAAAGTATAAATTCTGTTGTGGATTTTTGCTGTGCCATTTCTTTTTTGAAGTGAGTTTAATTATTGATCACTATATAGAACGAGGGATTATTATTTAGGTGTTTTC
TGTGACGTGTTATATTTGGAACCTTTTCTAGTTCAATTTTCTTCAAGTTGCAATCACATTCTGGTATTTGCTTTTATATCTTGATAAAATCTGTTGACCCCTTGGCATGG
TCCATAATCTCCATTAATTTCTCTGTTAAATTAACGAAGATACACCCTGATTTGGGAGCCGACTAAACGGTAAGGGCAGCAAACACAAATTAAATTAGAGTGTTTTCATC
TAGCAAGTCAGTCTAGTAATTTCATTCATGATCTAACTGTGTATTTGGGATTCCTTTGATTATCTTCTGAGTTTGCTTATGAATTTTTCGTAGCTGATATTTCAAATTGT
AACTTTCATTCTCATTAAGTTCTTTGTTCTGCTTTTTACTAATGACACACACTTGAATTCATCAGCTACCAAGAATTGAATTAGTGGTGGGTTTTGGGGAAACAAAACTT
GCAAGAGCG

Protein sequence

Show/hide protein sequence

MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDV
DLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQALRSGASS

Lsi08G008690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome