; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G009000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G009000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein SPIRAL1-like 1
Genome locationchr08:17361568..17363605
RNA-Seq ExpressionLsi08G009000
SyntenyLsi08G009000
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585249.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4582.95Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP-----------SNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNF
        GRGVSSGGGQSSLGYLFG G++PNAGAPKGG QAP P           SNEGK V KPA SKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP-----------SNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_004144171.1 protein SPIRAL1-like 1 [Cucumis sativus]6.0e-5394.17Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+ KPAVSKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

XP_008445444.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo]2.2e-5598.33Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTV KPAVSKPAATASPPAD TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

XP_022961880.1 protein SPIRAL1-like 2 [Cucurbita moschata]1.2e-4892.37Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK V KPA SKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAGGK
        APGGGSSLDYLFGGAGGK
Subjt:  APGGGSSLDYLFGGAGGK

XP_038886245.1 protein SPIRAL1-like 1 [Benincasa hispida]8.4e-5597.5Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP NEGKTV KPAVSKPAATASPPAD TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

TrEMBL top hitse value%identityAlignment
A0A0A0KFN2 Uncharacterized protein2.9e-5394.17Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+ KPAVSKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

A0A1S3BCR3 protein SPIRAL1-like 11.1e-5598.33Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTV KPAVSKPAATASPPAD TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

A0A5A7VC71 Protein SPIRAL1-like 11.1e-5598.33Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTV KPAVSKPAATASPPAD TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGGAGGK
        HAAPGGGSSLDYLFGGAGGK
Subjt:  HAAPGGGSSLDYLFGGAGGK

A0A6J1HDG7 protein SPIRAL1-like 25.7e-4992.37Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK V KPA SKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAGGK
        APGGGSSLDYLFGGAGGK
Subjt:  APGGGSSLDYLFGGAGGK

A0A6J1K972 protein SPIRAL1-like 25.7e-4992.37Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK V KPA SKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAGGK
        APGGGSSLDYLFGGAGGK
Subjt:  APGGGSSLDYLFGGAGGK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.3e-3167.24Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS GGGQSSLGYLFG G+AP          AP PS+E  T+P  A   P   A+   + TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAG
        APGGGSSLDYLFGG G
Subjt:  APGGGSSLDYLFGGAG

Q2QQ99 Protein SPIRAL1-like 31.7e-2662.61Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPA-VSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVH
        GRGVSSGGGQSSLGYLFG G+AP                  K+  KPA V KPA ++S  A+  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV 
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPA-VSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVH

Query:  AAPGGGSSLDYLFGG
        AAPGGGSSLDYLF G
Subjt:  AAPGGGSSLDYLFGG

Q2R0W8 Protein SPIRAL1-like 22.2e-2661.21Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPP--ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV
        GRGVSSGGGQSSLGYLFG G+   A   K     P  + E +T P P      A A+ P  A+  K+IPAGI S+ +NNY RA GQN GNF+TDRPSTKV
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPP--ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKV

Query:  HAAPGGGSSLDYLFGG
        HAAPGGGSSL YLFGG
Subjt:  HAAPGGGSSLDYLFGG

Q7Y1L9 Protein SPIRAL1-like 11.2e-2766.96Show/hide
Query:  RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASP-PADATKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVH
        RG S+GGGQSSLGYLFG  +AP   A      AP P+      P  AV+ PA   SP  ADATKQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKVH
Subjt:  RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASP-PADATKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVH

Query:  AAPGGGSSLDYLFGG
        AAPGGGSSL YLFGG
Subjt:  AAPGGGSSLDYLFGG

Q9LE54 Protein SPIRAL1-like 21.6e-2761.4Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS+GGGQSSLGYLFG G+AP   A         P+    +   P     AA A    D+ KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGG
        APGGGSSLDYLFGG
Subjt:  APGGGSSLDYLFGG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.6e-3267.24Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS GGGQSSLGYLFG G+AP          AP PS+E  T+P  A   P   A+   + TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHA
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGGAG
        APGGGSSLDYLFGG G
Subjt:  APGGGSSLDYLFGGAG

AT1G69230.1 SPIRAL1-like21.1e-2861.4Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS+GGGQSSLGYLFG G+AP   A         P+    +   P     AA A    D+ KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGG
        APGGGSSLDYLFGG
Subjt:  APGGGSSLDYLFGG

AT1G69230.2 SPIRAL1-like21.1e-2861.4Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA
        GRGVS+GGGQSSLGYLFG G+AP   A         P+    +   P     AA A    D+ KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHA

Query:  APGGGSSLDYLFGG
        APGGGSSLDYLFGG
Subjt:  APGGGSSLDYLFGG

AT2G03680.1 spiral15.1e-2662.71Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATAS----PPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST
        GRG S GGGQSSL YLFG GDAP        R AP  SN G   P  AV+  A T +     PA+  KQIPAGI  +  NNY RA+GQNTGNF+TDRPST
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATAS----PPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST

Query:  KVHAAPGGGSSLDYLFGG
        KVHAAPGGGSSLDYLF G
Subjt:  KVHAAPGGGSSLDYLFGG

AT2G03680.2 spiral15.1e-2662.71Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATAS----PPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST
        GRG S GGGQSSL YLFG GDAP        R AP  SN G   P  AV+  A T +     PA+  KQIPAGI  +  NNY RA+GQNTGNF+TDRPST
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATAS----PPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST

Query:  KVHAAPGGGSSLDYLFGG
        KVHAAPGGGSSLDYLF G
Subjt:  KVHAAPGGGSSLDYLFGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATCAAAGAGCCATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACTTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCTAA
AGGTGGCCGCCAAGCACCACCGCCTTCAAATGAAGGGAAGACTGTACCCAAACCAGCAGTGTCCAAACCTGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGA
TTCCAGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCG
GGTGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATCAAAGAGCCATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACTTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCTAA
AGGTGGCCGCCAAGCACCACCGCCTTCAAATGAAGGGAAGACTGTACCCAAACCAGCAGTGTCCAAACCTGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGA
TTCCAGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTTCACGCCGCCCCG
GGTGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA
Protein sequenceShow/hide protein sequence
MINQRAMGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVPKPAVSKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAP
GGGSSLDYLFGGAGGK