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Lsi08G009100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G009100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:17493751..17494074
RNA-Seq ExpressionLsi08G009100
SyntenyLsi08G009100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1206573.1 hypothetical protein CJ030_MR7G020458 [Morella rubra]4.0e-1353.06Show/hide
Query:  ASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPS-CDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESRYVIEQNI
        ++EFPGFQT V HKDD VYR SL+RLQR AP PL L + ++ PS C+G  K     +++ S SS+ N  ++ +DPI LLSPL   SL ES YV E NI
Subjt:  ASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPS-CDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESRYVIEQNI

KAE8647257.1 hypothetical protein Csa_018305, partial [Cucumis sativus]9.4e-3171.68Show/hide
Query:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKR---LSIDNNTC-SFSSTS-NAPFHCRDPIQLLSPLM--SLFE
        MEDFGA A+EFPGFQT+VAH+DD+VYRRSLTRLQR APHPL LPR TS PSC GASK+   L  +NN C SFSSTS NA FHC DPI LLSPL+  SLFE
Subjt:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKR---LSIDNNTC-SFSSTS-NAPFHCRDPIQLLSPLM--SLFE

Query:  SRYVIEQNIINKS
        S  VIE+N+  KS
Subjt:  SRYVIEQNIINKS

PON64471.1 hypothetical protein TorRG33x02_273200 [Trema orientale]8.3e-1148.57Show/hide
Query:  GAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKRLSIDNNTCSFSSTSNAP-----FHCRDPIQLLSPLM--SLFESRY
        G  A +FPGFQT  AHKDD+V +RSL+RLQR AP PL L P++ S  SC G  K     + + S SSTS++      +H +DPI LLSPL+  SL ES  
Subjt:  GAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKRLSIDNNTCSFSSTSNAP-----FHCRDPIQLLSPLM--SLFESRY

Query:  VIEQN
        + ++N
Subjt:  VIEQN

XP_023873319.1 uncharacterized protein LOC111985907 [Quercus suber]5.4e-1050.94Show/hide
Query:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLT-RLQRHAPHPLPL-PRLTSCPSCDGA-SKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESR
        MED   +++EFPGFQT V HKDD V+ RSL+ RLQR AP PL L PR+ +  +C+GA +  LS  N + S SS+ N+ +H ++PI LLSPL+  S  ES 
Subjt:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLT-RLQRHAPHPLPL-PRLTSCPSCDGA-SKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESR

Query:  YVIEQN
        Y+ E N
Subjt:  YVIEQN

XP_042979927.1 uncharacterized protein LOC122310107 [Carya illinoinensis]8.3e-1148.54Show/hide
Query:  AAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKRLSIDNNTCSFSSTS----NAPFHCRDPIQLLSPLM--SLFESRYVI
        ++ +EFPGFQT   HKDD V+ RSL+RLQR AP PL L P++ S  +C+GA+ +  +  +  S SS+S    N+ ++ +DPI LLSPL+  SL ES YV 
Subjt:  AAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKRLSIDNNTCSFSSTS----NAPFHCRDPIQLLSPLM--SLFESRYVI

Query:  EQN
        E N
Subjt:  EQN

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ2 Uncharacterized protein4.6e-3171.68Show/hide
Query:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKR---LSIDNNTC-SFSSTS-NAPFHCRDPIQLLSPLM--SLFE
        MEDFGA A+EFPGFQT+VAH+DD+VYRRSLTRLQR APHPL LPR TS PSC GASK+   L  +NN C SFSSTS NA FHC DPI LLSPL+  SLFE
Subjt:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKR---LSIDNNTC-SFSSTS-NAPFHCRDPIQLLSPLM--SLFE

Query:  SRYVIEQNIINKS
        S  VIE+N+  KS
Subjt:  SRYVIEQNIINKS

A0A2I4H8F7 uncharacterized protein LOC1090144124.4e-1049.51Show/hide
Query:  AAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKR--LSIDNNTCSFSSTSNAPFHC--RDPIQLLSPLM--SLFESRYVI
        ++ +EFPGFQT   HKDD V+ RSL+RLQR AP PL L P++ S  +C+GA+ +  +   N++ S SS+S   F+   +DPI LLSPL+  SL ES YV 
Subjt:  AAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKR--LSIDNNTCSFSSTSNAPFHC--RDPIQLLSPLM--SLFESRYVI

Query:  EQN
        E N
Subjt:  EQN

A0A2P5CTY4 Uncharacterized protein4.0e-1148.57Show/hide
Query:  GAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKRLSIDNNTCSFSSTSNAP-----FHCRDPIQLLSPLM--SLFESRY
        G  A +FPGFQT  AHKDD+V +RSL+RLQR AP PL L P++ S  SC G  K     + + S SSTS++      +H +DPI LLSPL+  SL ES  
Subjt:  GAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPL-PRLTSCPSCDGASKRLSIDNNTCSFSSTSNAP-----FHCRDPIQLLSPLM--SLFESRY

Query:  VIEQN
        + ++N
Subjt:  VIEQN

A0A2P6R2B2 Uncharacterized protein4.4e-1045.63Show/hide
Query:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESRYVI
        MED G   +EFPGFQT  AHKDD ++RR L+RLQR AP+PL L +  +  + + +S   +  +N  S SS ++  +  +DPI LLSPL+  SL ES Y+ 
Subjt:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESRYVI

Query:  EQN
        + N
Subjt:  EQN

A0A6A1V1J8 Uncharacterized protein1.9e-1353.06Show/hide
Query:  ASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPS-CDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESRYVIEQNI
        ++EFPGFQT V HKDD VYR SL+RLQR AP PL L + ++ PS C+G  K     +++ S SS+ N  ++ +DPI LLSPL   SL ES YV E NI
Subjt:  ASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPS-CDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM--SLFESRYVIEQNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G69050.1 unknown protein1.8e-0844.44Show/hide
Query:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLT-RLQRHAPHPLPLPRLTSCPSCDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM
        MED G     FPGF+  V H DD V+RRSL+ RLQR AP PL LP     PS +  S    +  +T   + T        DPI LLSPL+
Subjt:  MEDFGAAASEFPGFQTSVAHKDDVVYRRSLT-RLQRHAPHPLPLPRLTSCPSCDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTTTGGTGCAGCTGCATCTGAGTTTCCAGGCTTTCAAACCAGTGTTGCTCACAAAGACGACGTCGTTTACAGGAGGTCGTTGACTCGGTTGCAACGCCACGC
TCCCCACCCTCTCCCGTTACCACGCCTCACCTCTTGTCCCTCGTGCGACGGTGCATCGAAACGACTATCTATTGACAACAACACTTGTTCTTTTTCTTCAACATCAAATG
CACCTTTTCACTGTAGAGATCCGATCCAGTTACTTTCACCTCTCATGTCGTTGTTTGAATCTCGCTATGTCATAGAGCAAAATATTATTAATAAGTCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTTTGGTGCAGCTGCATCTGAGTTTCCAGGCTTTCAAACCAGTGTTGCTCACAAAGACGACGTCGTTTACAGGAGGTCGTTGACTCGGTTGCAACGCCACGC
TCCCCACCCTCTCCCGTTACCACGCCTCACCTCTTGTCCCTCGTGCGACGGTGCATCGAAACGACTATCTATTGACAACAACACTTGTTCTTTTTCTTCAACATCAAATG
CACCTTTTCACTGTAGAGATCCGATCCAGTTACTTTCACCTCTCATGTCGTTGTTTGAATCTCGCTATGTCATAGAGCAAAATATTATTAATAAGTCTGGTTGA
Protein sequenceShow/hide protein sequence
MEDFGAAASEFPGFQTSVAHKDDVVYRRSLTRLQRHAPHPLPLPRLTSCPSCDGASKRLSIDNNTCSFSSTSNAPFHCRDPIQLLSPLMSLFESRYVIEQNIINKSG