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Lsi08G009160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G009160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:17545730..17552232
RNA-Seq ExpressionLsi08G009160
SyntenyLsi08G009160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1220520.1 hypothetical protein CJ030_MR3G015773 [Morella rubra]1.3e-0545.12Show/hide
Query:  PVILPPTEAEGKRCSVKPASRGVLNFMGNGIWASAKSPKPYFLLGMGGPVYFYKELYPMGRARFQPLHCPHTSYKPTLPSSA
        PVILP   A G RC+VKPASR  L    +   A A+  +P   LG G PV             FQ L CPH+S+K  LPSSA
Subjt:  PVILPPTEAEGKRCSVKPASRGVLNFMGNGIWASAKSPKPYFLLGMGGPVYFYKELYPMGRARFQPLHCPHTSYKPTLPSSA
KAG8496085.1 hypothetical protein CXB51_009220 [Gossypium anomalum]1.1e-0435.04Show/hide
Query:  IRDENEDEDD------LLEHFAMDYSSENRPVILPPTEAEGKRCSVKPASRGVLNFMGNGIWASAKSPKPYFLLGMGGPVYFYKELYPMGRARFQPLHCP
        + DE E ++D       L H   ++    +PVILP     G RCSVKPASR + +   +   A A++P     LGMG P   +     M R R    + P
Subjt:  IRDENEDEDD------LLEHFAMDYSSENRPVILPPTEAEGKRCSVKPASRGVLNFMGNGIWASAKSPKPYFLLGMGGPVYFYKELYPMGRARFQPLHCP

Query:  HTSYKPTLPSSAIAEVT
        H  +K  LP SAI E++
Subjt:  HTSYKPTLPSSAIAEVT
TrEMBL top hitse value%identityAlignment
A0A6A1WCG3 Uncharacterized protein6.1e-0645.12Show/hide
Query:  PVILPPTEAEGKRCSVKPASRGVLNFMGNGIWASAKSPKPYFLLGMGGPVYFYKELYPMGRARFQPLHCPHTSYKPTLPSSA
        PVILP   A G RC+VKPASR  L    +   A A+  +P   LG G PV             FQ L CPH+S+K  LPSSA
Subjt:  PVILPPTEAEGKRCSVKPASRGVLNFMGNGIWASAKSPKPYFLLGMGGPVYFYKELYPMGRARFQPLHCPHTSYKPTLPSSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACTAAATTATTGCATAATGAAACCGGTGACCGAAGCCGATGCCGATCAATTAGAGATGAGAATGAAGATGAAGATGATCTATTGGAGCACTTTGCAATGGATTA
TAGCAGCGAGAACCGACCCGTTATCCTTCCACCGACAGAAGCGGAAGGTAAACGCTGCTCTGTGAAACCAGCCTCACGCGGTGTCCTAAACTTTATGGGCAATGGAATCT
GGGCTTCCGCCAAGAGCCCAAAGCCATACTTCTTACTTGGAATGGGCGGGCCAGTATATTTCTACAAAGAACTCTACCCGATGGGCCGTGCCCGCTTCCAACCACTTCAT
TGCCCTCATACGAGTTACAAGCCCACATTACCGAGCTCGGCGATAGCAGAAGTTACAAGGCGCTATATGAAGACTATGCTTAACTACAAATCTAGCGATCATTATGGTGA
AAACTCAAATGGGAATCTCAACTATTCTCACGAGGACGATCTACTTGATCCGGCAACATTTTGGTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACTAAATTATTGCATAATGAAACCGGTGACCGAAGCCGATGCCGATCAATTAGAGATGAGAATGAAGATGAAGATGATCTATTGGAGCACTTTGCAATGGATTA
TAGCAGCGAGAACCGACCCGTTATCCTTCCACCGACAGAAGCGGAAGGTAAACGCTGCTCTGTGAAACCAGCCTCACGCGGTGTCCTAAACTTTATGGGCAATGGAATCT
GGGCTTCCGCCAAGAGCCCAAAGCCATACTTCTTACTTGGAATGGGCGGGCCAGTATATTTCTACAAAGAACTCTACCCGATGGGCCGTGCCCGCTTCCAACCACTTCAT
TGCCCTCATACGAGTTACAAGCCCACATTACCGAGCTCGGCGATAGCAGAAGTTACAAGGCGCTATATGAAGACTATGCTTAACTACAAATCTAGCGATCATTATGGTGA
AAACTCAAATGGGAATCTCAACTATTCTCACGAGGACGATCTACTTGATCCGGCAACATTTTGGTGTTAA
Protein sequenceShow/hide protein sequence
MKTKLLHNETGDRSRCRSIRDENEDEDDLLEHFAMDYSSENRPVILPPTEAEGKRCSVKPASRGVLNFMGNGIWASAKSPKPYFLLGMGGPVYFYKELYPMGRARFQPLH
CPHTSYKPTLPSSAIAEVTRRYMKTMLNYKSSDHYGENSNGNLNYSHEDDLLDPATFWC