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Lsi08G009340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G009340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionexportin-7 isoform X3
Genome locationchr08:17801857..17806323
RNA-Seq ExpressionLsi08G009340
SyntenyLsi08G009340
Gene Ontology termsGO:0006611 - protein export from nucleus (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005049 - nuclear export signal receptor activity (molecular function)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445377.1 PREDICTED: exportin-7 isoform X1 [Cucumis melo]1.6e-1094.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
XP_008445379.1 PREDICTED: exportin-7 isoform X2 [Cucumis melo]1.6e-1094.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
XP_008445380.1 PREDICTED: exportin-7 isoform X4 [Cucumis melo]1.6e-1094.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
XP_011657449.1 exportin-7 isoform X1 [Cucumis sativus]1.6e-1094.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
XP_011657452.1 exportin-7 isoform X2 [Cucumis sativus]1.6e-1094.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
TrEMBL top hitse value%identityAlignment
A0A0A0KH87 Importin N-terminal domain-containing protein7.8e-1194.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
A0A1S3BC36 exportin-7 isoform X27.8e-1194.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
A0A1S3BCK1 exportin-7 isoform X47.8e-1194.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
A0A1S4DVF4 exportin-7 isoform X17.8e-1194.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
A0A1S4DVF5 exportin-7 isoform X37.8e-1194.74Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+AVDQHPRLSLCFEKLMADVTRSLDSKN+DKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G06120.1 ARM repeat superfamily protein8.6e-1069.23Show/hide
Query:  MSKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        M +  DQH RLS CF+ LM D++R LDSKNRDKFTQNLT
Subjt:  MSKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
AT5G06120.2 ARM repeat superfamily protein6.5e-1071.05Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+  DQH RLS CF+ LM D++R LDSKNRDKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
AT5G06120.3 ARM repeat superfamily protein6.5e-1071.05Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+  DQH RLS CF+ LM D++R LDSKNRDKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
AT5G06120.4 ARM repeat superfamily protein6.5e-1071.05Show/hide
Query:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT
        S+  DQH RLS CF+ LM D++R LDSKNRDKFTQNLT
Subjt:  SKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGGCAGTGGATCAACACCCACGCCTTTCCCTCTGTTTTGAAAAACTAATGGCGGATGTCACGCGAAGCTTGGATTCAAAGAACAGGGACAAGTTCACTCAAAA
CCTAACTTTTCGATTCCTTGTGACGAGATTTGACGATGAATTGTCTGCTCACGACATTCATTCACTTGGGGGGAAGGGAAAAATGATATGGGAGAAAAAACATAACATAG
ATATTGCCAGAAGGACCCAGAAGCGAAGCGGATTACTTAAAACTGCACAGGTCTCCATAGTGAGAAAAGGATTTCACTCGAGGGCAGCCCAGTTGTCTTTTTGGAACCGA
TCTGAGTCTGATCTCACTTGTGAACCAAGCAACTCCGGAGGAAGAGATCTTAAACATAAACATTGTTCAAATCAGGCTGTTCCACTACTTAGCTGGAGAGTCATTTTTAT
GTTCATCGCTGCCAACTCTGCAGCCAAGTACTTAAAGACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAGGCAGTGGATCAACACCCACGCCTTTCCCTCTGTTTTGAAAAACTAATGGCGGATGTCACGCGAAGCTTGGATTCAAAGAACAGGGACAAGTTCACTCAAAA
CCTAACTTTTCGATTCCTTGTGACGAGATTTGACGATGAATTGTCTGCTCACGACATTCATTCACTTGGGGGGAAGGGAAAAATGATATGGGAGAAAAAACATAACATAG
ATATTGCCAGAAGGACCCAGAAGCGAAGCGGATTACTTAAAACTGCACAGGTCTCCATAGTGAGAAAAGGATTTCACTCGAGGGCAGCCCAGTTGTCTTTTTGGAACCGA
TCTGAGTCTGATCTCACTTGTGAACCAAGCAACTCCGGAGGAAGAGATCTTAAACATAAACATTGTTCAAATCAGGCTGTTCCACTACTTAGCTGGAGAGTCATTTTTAT
GTTCATCGCTGCCAACTCTGCAGCCAAGTACTTAAAGACGTAA
Protein sequenceShow/hide protein sequence
MSKAVDQHPRLSLCFEKLMADVTRSLDSKNRDKFTQNLTFRFLVTRFDDELSAHDIHSLGGKGKMIWEKKHNIDIARRTQKRSGLLKTAQVSIVRKGFHSRAAQLSFWNR
SESDLTCEPSNSGGRDLKHKHCSNQAVPLLSWRVIFMFIAANSAAKYLKT