; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G009360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G009360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description3'-5' exoribonuclease 1-like
Genome locationchr08:17831967..17847256
RNA-Seq ExpressionLsi08G009360
SyntenyLsi08G009360
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146778.1 3'-5' exoribonuclease 1 [Cucumis sativus]2.5e-24193.73Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCH NNDIPETNHPL NNFIERPNEFHNKPAYQHNS SWPAFHF+SQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+ASDCQFYSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFR SITNSLMWQTTDCPLQWKQSPE  T P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWA+P
Subjt:  ATKGARCHYFEWASP

XP_008445374.1 PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis melo]5.1e-24293.98Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCH NNDIPETNHPL NNFIERPNEFHNKPAYQHNS SWPAFHF+SQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+ASDCQFYSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFR SITNSLMWQTTDCPLQWKQSPE  T P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

XP_022997162.1 3'-5' exoribonuclease 1-like [Cucurbita maxima]4.6e-24394.7Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNG+PFSLQHSGNSADGFQELTDEISCHG+NDIPETNH LANNFIERPNEFHNKPAYQHNSGSW AFHFDSQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+AS+CQFYSLPVENRFQY PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLALLMHRGFR SITNSLMWQT+DCP QWKQSPEA TLP QPPMKPKPVH+P++QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

XP_023546233.1 uncharacterized protein LOC111805389 [Cucurbita pepo subsp. pepo]3.3e-24193.98Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNG+PFSLQHSGNSADGFQE++DEISCHG+NDIPETNH LANNFIERPNEFHNKPAYQHNSGSW AFHFDSQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+AS+CQFYSLPVENRFQYVPFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLALLMHRGFR SITNSLMWQT+DCP QWKQSP A TL  QPPMKPKPVH+P++QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

XP_038885029.1 3'-5' exonuclease eri1-like [Benincasa hispida]4.2e-24494.46Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISC  NNDIPETNHPL NNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        MN SDCQ YSLPVENR QYVPFKMFEQNYHC++RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL+W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLALLMHRGFR SITNSLMWQTTDCPLQWKQ PE  TLPLQPPMKPKP+ +P++QYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARC YFEWASP
Subjt:  ATKGARCHYFEWASP

TrEMBL top hitse value%identityAlignment
A0A0A0KDW9 Exonuclease domain-containing protein1.2e-24193.73Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCH NNDIPETNHPL NNFIERPNEFHNKPAYQHNS SWPAFHF+SQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+ASDCQFYSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFR SITNSLMWQTTDCPLQWKQSPE  T P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWA+P
Subjt:  ATKGARCHYFEWASP

A0A1S3BCJ6 3'-5' exoribonuclease 1-like2.5e-24293.98Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCH NNDIPETNHPL NNFIERPNEFHNKPAYQHNS SWPAFHF+SQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+ASDCQFYSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFR SITNSLMWQTTDCPLQWKQSPE  T P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

A0A5A7VEQ6 3'-5' exoribonuclease 1-like2.8e-23893.63Show/hide
Query:  ESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMNASDCQ
        +SM+RNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCH NNDIPETNHPL NNFIERPNEFHNKPAYQHNS SWPAFHF+SQKVQQCQM+ASDCQ
Subjt:  ESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMNASDCQ

Query:  FYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQV
        FYSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLTGIQQIQV
Subjt:  FYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQV

Query:  DRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAK
        DRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL W+GRAHCGLDDAK
Subjt:  DRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAK

Query:  NTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC
        NTARLLAL+MH+GFR SITNSLMWQTTDCPLQWKQSPE  T P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC
Subjt:  NTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC

Query:  HYFEWASP
        HYFEWASP
Subjt:  HYFEWASP

A0A6J1HFU9 uncharacterized protein LOC1114626438.0e-24193.98Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNG+PFSLQHSGNSADGFQELTDEISCHG+NDIPETNH LANNFIERPNEFHNKPAYQHNSGSW A HFDSQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+AS+CQFYSLPVENRFQY PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLALLMHRGFR SITNSLMWQT+DCP QWKQSP A TL  QPPMKPKPVH+P++QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

A0A6J1K486 3'-5' exoribonuclease 1-like2.2e-24394.7Show/hide
Query:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ
        MMALERKESM+RNCEASIKCLQNNG+PFSLQHSGNSADGFQELTDEISCHG+NDIPETNH LANNFIERPNEFHNKPAYQHNSGSW AFHFDSQKVQQCQ
Subjt:  MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQ

Query:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT
        M+AS+CQFYSLPVENRFQY PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MNASDCQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT
        CGLDDAKNTARLLALLMHRGFR SITNSLMWQT+DCP QWKQSPEA TLP QPPMKPKPVH+P++QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRLSITNSLMWQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

SwissProt top hitse value%identityAlignment
A6QLH5 ERI1 exoribonuclease 31.9e-3440.21Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN
        Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+ K+G+   N  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN

Query:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFG-GARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGF
           VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RGF
Subjt:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFG-GARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGF

A8K979 ERI1 exoribonuclease 22.6e-3941.71Show/hide
Query:  QEFQYFVVIDFEATCDKD-RNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNTN
        Q F Y +VIDFE+TC  D ++ H QEIIEFP+V++++ TGQ+++ FQ YV+P  +  LS+FC +LTGI+Q QVD GV L   L +  KW+ K +  KN  
Subjt:  QEFQYFVVIDFEATCDKD-RNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNTN

Query:  FAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH
        FA                VTWS+WD  V LE EC+ K++ KP + N WI+L+  ++  +      L  A++  G+ + GR H GLDD++NTA L   ++ 
Subjt:  FAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH

Query:  RGFRLSITNSL
         G  + IT SL
Subjt:  RGFRLSITNSL

O43414 ERI1 exoribonuclease 31.9e-3440.21Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN
        Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+ K+G+   N  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN

Query:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFG-GARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGF
           VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RGF
Subjt:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFG-GARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGF

Q5BKS4 ERI1 exoribonuclease 23.8e-3840.28Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNT-N
        Q + Y +V+DFE+TC  D   H   EIIEFP+V++++ TG++E+ F  YV+P  +  LS+FC +LTGI+Q+QVD GV L   L +  KW+ K   + T +
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNT-N

Query:  FAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH
        FA                VTWS+WD  V LE ECR K++ KP + N WI+L+  +R  +      L  A++  G+ + GR H GLDD++NTA L   ++ 
Subjt:  FAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH

Query:  RGFRLSITNSL
         G  + IT SL
Subjt:  RGFRLSITNSL

Q5HZL1 ERI1 exoribonuclease 24.5e-3940.95Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK----KGI--
        Q F+Y ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  +  LSDFC +LTGI Q QVD GV L   L + + W++K    KGI  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK----KGI--

Query:  ----------KNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR
                  ++   A VTWS+WD  V L  ECR K+++KP   N WI+L+  ++  +      L  A++  G+ + GR H GLDD++NTA+L + ++  
Subjt:  ----------KNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR

Query:  GFRLSITNSL
        G  + IT SL
Subjt:  GFRLSITNSL

Arabidopsis top hitse value%identityAlignment
AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-2128.92Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT------CNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI
        QEF +F+VID E            EI+EFP +IV + T ++   F  +VRPT       N+++     +L G+ ++  D  +   + +   + WL +  +
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT------CNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI

Query:  --KNTNF-----AVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFR
          K+T++     A VT  NWD +  +  +C    I  PPYF  WINLK  +   +G     +   +   G+   G  H G+DD KN  R++  ++  G  
Subjt:  --KNTNF-----AVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFR

Query:  LSIT
        L +T
Subjt:  LSIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCCCTTGAACGCAAAGAAAGTATGAAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTTTGCAACATAGTGGAAATTCTGC
TGATGGTTTCCAAGAACTTACAGATGAAATCAGTTGTCATGGCAACAATGATATTCCTGAAACAAACCACCCATTGGCCAACAATTTCATTGAACGTCCAAATGAATTTC
ACAATAAACCTGCTTATCAGCATAATTCTGGATCATGGCCAGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAATGCTTCTGATTGTCAATTCTACTCT
TTGCCAGTGGAGAACCGCTTCCAATATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATCTTCGGTTGCAAGAGTTTCAATATTTTGTGGTTATAGATTTTGA
AGCAACGTGTGATAAAGATAGAAATCCCCATCCACAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATG
TGCGCCCAACTTGCAATCAACACTTGAGTGATTTCTGCAGGGATCTAACTGGAATTCAGCAAATTCAGGTGGACAGAGGTGTTACACTCAATGAAGCTCTCCTCAGGCAT
GATAAATGGCTTGAAAAGAAGGGGATTAAGAATACAAATTTTGCAGTGGTAACATGGTCAAACTGGGATTGCCGGGTCATGTTAGAGTCAGAATGCCGTTTCAAGAAGAT
TCGGAAGCCTCCATATTTCAACAGATGGATCAACTTAAAAATTCCATTTCGTGAGGTTTTCGGGGGAGCACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGCTTAG
CTTGGCAAGGTCGTGCTCATTGTGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTTGCCCTTCTTATGCATAGAGGCTTCAGACTATCCATCACCAATTCATTGATG
TGGCAGACTACTGACTGTCCATTGCAATGGAAACAATCCCCAGAAGCCGCGACGCTCCCTCTGCAACCGCCGATGAAACCAAAGCCTGTGCACATTCCCCTTGTCCAATA
CTTCCCATACTGTTTCTGTGGGGTTAGAAGCAGCAGAGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTTCTTCTTTGGCTGTGGGAACTGGACTGCTACTAAGG
GGGCCCGGTGCCATTACTTCGAGTGGGCCTCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
TAGAATTCGAATTTTTTTTACCATAATTTGATTTTTATACGATATTTCATCGTCAATACACGTACATATATACTTTTTTTCGTTTCTTCTTTTCCAAACTGCTTCCCTCC
TCTCTCTCTCCCGGCTCACCTTCCAGATCACACCAGGAGGGAATTTCAGAGGTAGATCTGATGTACTTGGTGGTCGATCTCAATTACTCTGAAGATCATGATGGCCCTTG
AACGCAAAGAAAGTATGAAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTTTGCAACATAGTGGAAATTCTGCTGATGGTTTCCAA
GAACTTACAGATGAAATCAGTTGTCATGGCAACAATGATATTCCTGAAACAAACCACCCATTGGCCAACAATTTCATTGAACGTCCAAATGAATTTCACAATAAACCTGC
TTATCAGCATAATTCTGGATCATGGCCAGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAATGCTTCTGATTGTCAATTCTACTCTTTGCCAGTGGAGA
ACCGCTTCCAATATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATCTTCGGTTGCAAGAGTTTCAATATTTTGTGGTTATAGATTTTGAAGCAACGTGTGAT
AAAGATAGAAATCCCCATCCACAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATGTGCGCCCAACTTG
CAATCAACACTTGAGTGATTTCTGCAGGGATCTAACTGGAATTCAGCAAATTCAGGTGGACAGAGGTGTTACACTCAATGAAGCTCTCCTCAGGCATGATAAATGGCTTG
AAAAGAAGGGGATTAAGAATACAAATTTTGCAGTGGTAACATGGTCAAACTGGGATTGCCGGGTCATGTTAGAGTCAGAATGCCGTTTCAAGAAGATTCGGAAGCCTCCA
TATTTCAACAGATGGATCAACTTAAAAATTCCATTTCGTGAGGTTTTCGGGGGAGCACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGCTTAGCTTGGCAAGGTCG
TGCTCATTGTGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTTGCCCTTCTTATGCATAGAGGCTTCAGACTATCCATCACCAATTCATTGATGTGGCAGACTACTG
ACTGTCCATTGCAATGGAAACAATCCCCAGAAGCCGCGACGCTCCCTCTGCAACCGCCGATGAAACCAAAGCCTGTGCACATTCCCCTTGTCCAATACTTCCCATACTGT
TTCTGTGGGGTTAGAAGCAGCAGAGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTTCTTCTTTGGCTGTGGGAACTGGACTGCTACTAAGGGGGCCCGGTGCCA
TTACTTCGAGTGGGCCTCTCCCTGATGCATGGAATGGCTTATGAATCTTCTTATTGAAGCATTCACTAAATGAATTTATGTAAAGAAAGAAAAAAAATAAACAAAAGAGT
AAAAAAAAAGTGTATTGGAAGATATGAAGTTTGATTTCTGTCTCCTGGTAGAAGATGCTTGGATGCTTGGTGAGGTTTCTGAGTCATACAGAATTAGATGAGTTGGTGGT
TGAAACTGTGAAATTATGCTCCTAAAAAAGTAAAAAAAAGAAAGAAAAAAAAAAAGTGGTGCAAGCTTTTGGGAGCTTCCAACATGTAAAGTCTGACTTATTGACTGGAG
AACCTATTGGGGTGTGAGTTGTGAGAGATTATGGGTAGTTAGGATGGTGCTTTTATAATGATCGATCAGGCATGCTAAATTATCTGAATAATCTTTTGGATAGGTATGCT
TTGCTTTTATTTTTATTTTTAATCGTAATCTAATGGCAATCAGTAGAATTGCTAATATCATTCCCCCCAATATTCTTAGTTGGTTCTAATGTTAGTTGCCTTTCAGATAC
ATACATCTTTTTCTCGCATGATTATGTTACTAATTACAACAAAGATGGTAGCTTTTCATTTGTTTTATAATGACTATTTTCATTAATCTTCAGTTATATGATTGATTAGG
TGGATTTCACTTGTTCTTTTACTTCAATGTTATTTTAGTTGGAGAGAGTATTGACAAC
Protein sequenceShow/hide protein sequence
MMALERKESMKRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHGNNDIPETNHPLANNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMNASDCQFYS
LPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRH
DKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRLSITNSLM
WQTTDCPLQWKQSPEAATLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP