CuGenDBv2

Gene ID	Lsi08G009400
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr08:17871545..17872537
RNA-Seq Expression	Lsi08G009400
Synteny	Lsi08G009400
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR031851 - Protein of unknown function DUF4750

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064812.1 uncharacterized protein E6C27_scaffold82G001200 [Cucumis melo var. makuwa]

8.2e-39

91.4

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW
        MESSSSSF SFEYSLS WDYLDL+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKP K KPPTRRLSKFYD+LNSQTSASGW
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW

XP_008445365.1 PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo]

8.2e-39

91.4

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW
        MESSSSSF SFEYSLS WDYLDL+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKP K KPPTRRLSKFYD+LNSQTSASGW
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW

XP_008445367.1 PREDICTED: uncharacterized protein LOC103488423 isoform X2 [Cucumis melo]

8.2e-39

91.4

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW
        MESSSSSF SFEYSLS WDYLDL+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKP K KPPTRRLSKFYD+LNSQTSASGW
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW

XP_022997298.1 uncharacterized protein LOC111492244 isoform X1 [Cucurbita maxima]

1.2e-37

94.57

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG
        MESSSSSFSSFE SLSQWDYL LFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKK VKPKPPTRRLSKFY+NL+SQTSASG
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG

XP_023545613.1 uncharacterized protein LOC111804995 isoform X1 [Cucurbita pepo subsp. pepo]

9.0e-38

94.57

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG
        MESSSSSFSSFE SLSQWDYL+LFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKK VKPKPPTRRLSKFY+NL+SQTSASG
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BCI8 uncharacterized protein LOC103488423 isoform X1

3.9e-39

91.4

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW
        MESSSSSF SFEYSLS WDYLDL+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKP K KPPTRRLSKFYD+LNSQTSASGW
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW

A0A1S3BDD8 uncharacterized protein LOC103488423 isoform X2

3.9e-39

91.4

Show/hide

Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW
        MESSSSSF SFEYSLS WDYLDL+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKP K KPPTRRLSKFYD+LNSQTSASGW
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW

A0A5A7V8X8 Uncharacterized protein

3.9e-39

91.4

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW
        MESSSSSF SFEYSLS WDYLDL+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKP K KPPTRRLSKFYD+LNSQTSASGW
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW

A0A6J1KB20 uncharacterized protein LOC111492244 isoform X2

5.7e-38

94.57

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG
        MESSSSSFSSFE SLSQWDYL LFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKK VKPKPPTRRLSKFY+NL+SQTSASG
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG

A0A6J1KDG2 uncharacterized protein LOC111492244 isoform X1

5.7e-38

94.57

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Query:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG
        MESSSSSFSSFE SLSQWDYL LFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKK VKPKPPTRRLSKFY+NL+SQTSASG
Subjt:  MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G36380.1 unknown protein

2.1e-16

63.08

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Query:  FILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTR-RLSKFYDNLNSQ
        F++RP+LA+ F    I+L WFLAWKLVL HVPLVQEIFGLRKK   PKP +R R++KFY +++SQ
Subjt:  FILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTR-RLSKFYDNLNSQ

Sequences

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CDS sequence

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ATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGTATTCTCTATCTCAGTGGGATTATCTCGATCTATTCATACTACGCCCGATCCTCGCAGTTGTGTTCACTTTCTC
CTTGATTTCTCTCGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAACCCGTCAAGCCGAAGCCTCCGA
CGCGCCGACTATCGAAGTTTTATGATAATCTGAATTCCCAAACGTCAGCTTCTGGCTGGTAA

mRNA sequence

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GGGATTGATTGCGTGGCTGACTTCTTGTGCAACCGAGCTGTTATAATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGTATTCTCTATCTCAGTGGGATTATCTCGA
TCTATTCATACTACGCCCGATCCTCGCAGTTGTGTTCACTTTCTCCTTGATTTCTCTCGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAG
AAATTTTTGGTTTGCGTAAGAAACCCGTCAAGCCGAAGCCTCCGACGCGCCGACTATCGAAGTTTTATGATAATCTGAATTCCCAAACGTCAGCTTCTGGCTGGTAAGCT
CTTTTTGTTATCATTGTTTTATACCTGCTATTTGTTAGCTAGACTTATCTGAAACTTGTAGCTAGGGTTTAACCGTCAAATGGGAATTGAAAAATGTAGAAAGATAAGCA
TTATATCCGTCTTGTCTCGTTATTATACTTTTCTTCCATGTGAAATCTCATATCAGAAACTTGGTCACCTTGTAACTTAAACTTAATTACATGGAAAGGGAAAGAAGTAC
AAAATTCAACGCCACTCATGAAGAGTCGCAATCTTGGTTTCTTTTTCCGATGCTGGAAGAATCTTCTTGTCGTGTATTTATGAGCTTGAGATGATATATATAATATAGAT
ATTTGTGTATCCTGCTTCATGCAATACAGAGTATAAAAGGGTATCATATCATTATCATTTTCTTTGAGACTTTATCTCTGCATATATCATCGCCTGGCTATTGTTTTTCT
GCATCTGTTCTGTGTGTGTGAAAGGAAACAATCACTTTTTATTGATAGGATAAAAAATACTAATGCTC

Protein sequence

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MESSSSSFSSFEYSLSQWDYLDLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPVKPKPPTRRLSKFYDNLNSQTSASGW

Lsi08G009400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome