; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G009780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G009780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description40S ribosomal protein S6
Genome locationchr08:18259151..18261594
RNA-Seq ExpressionLsi08G009780
SyntenyLsi08G009780
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001377 - Ribosomal protein S6e
IPR014401 - Ribosomal protein S6, eukaryotic
IPR018282 - Ribosomal protein S6e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065138.1 40S ribosomal protein S6-like [Cucumis melo var. makuwa]9.2e-11585.29Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TK+GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPS+AA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

MBA0793974.1 hypothetical protein [Gossypium harknessii]4.7e-11986.67Show/hide
Query:  FNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR
        FNIANPTTGCQKKLEIDDDQKL+         ++   N        FLTRGS R+SV +PS RYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR
Subjt:  FNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR

Query:  GTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKAPK
        GTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+F TK+GKKVSKAPK
Subjt:  GTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKAPK

Query:  IQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        IQRLVTPLTLQRKRGRIAEKKKR+AKAK +AAEYQKLLA RLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  IQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

XP_004133785.1 40S ribosomal protein S6 [Cucumis sativus]9.2e-11585.66Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TK+GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

XP_022948606.1 40S ribosomal protein S6 [Cucurbita moschata]7.0e-11585.66Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TK+GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

XP_022962357.1 40S ribosomal protein S6-like [Cucurbita moschata]3.2e-11586.03Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TKAGKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

TrEMBL top hitse value%identityAlignment
A0A6J1G9P2 40S ribosomal protein S63.4e-11585.66Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TK+GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

A0A6J1HCI6 40S ribosomal protein S61.5e-11586.03Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TKAGKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

A0A6J1ICI3 40S ribosomal protein S63.4e-11585.66Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TK+GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

A0A6J1KAX8 40S ribosomal protein S64.4e-11585.66Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                     F  R  + + V   S   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSF TKAGKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKRGRIAEKKKRIAKAK+EAAEYQKLLASRLKEQRERRSESLAKKRSRLS ASKPSIAA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

A0A7J9GA40 Uncharacterized protein (Fragment)2.3e-11986.67Show/hide
Query:  FNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR
        FNIANPTTGCQKKLEIDDDQKL+         ++   N        FLTRGS R+SV +PS RYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR
Subjt:  FNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR

Query:  GTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKAPK
        GTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+F TK+GKKVSKAPK
Subjt:  GTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKAPK

Query:  IQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        IQRLVTPLTLQRKRGRIAEKKKR+AKAK +AAEYQKLLA RLKEQRERRSESLAKKRSRLSAASKPSIAA
Subjt:  IQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

SwissProt top hitse value%identityAlignment
O48549 40S ribosomal protein S6-14.7e-10676.56Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFN+ANPTTGCQKKLEIDDDQKL AF                           + + V   +   EFKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR F  K GK+VSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSIAA
        PKIQRLVTPLTLQRKR RIA+KKK+IAKA ++AA+YQKLLASRLKEQR+RRSESLAKKRSRL SAA+KPS+ A
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSIAA

P29345 40S ribosomal protein S6 (Fragment)3.5e-8586.27Show/hide
Query:  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRK
        KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   
Subjt:  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRK

Query:  LFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKP
        L+   KEDDVRKYVNT    F TK   K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAK+EAAEYQKLLASRLKEQRE+RSESLAKKRSRLSAASKP
Subjt:  LFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKP

Query:  SIAA
        SIAA
Subjt:  SIAA

P51430 40S ribosomal protein S6-22.1e-10677.94Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFN+ANPTTGCQKKLEIDDDQKL AF                     F  R  L + V   +   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+F  K GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKR RIA+KKKRIAKA ++AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+A    +AA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

P62753 40S ribosomal protein S63.3e-6757.52Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRY--EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRL
        MK NI+ P TGCQK +E+DD++KL  F                            R + E+ +     E+KGYV +I GG DKQGFPMKQGVLT GRVRL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRY--EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRL

Query:  LLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVS
        LL +G  C+R   RR GER+RKSVRGCIV  +LSVLNLVIVKKG+ D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+  N +  K  +
Subjt:  LLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVS

Query:  KAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSA
        KAPKIQRLVTP  LQ KR RIA KK+R  K K EAAEY KLLA R+KE +E+R E +AK+R RLS+
Subjt:  KAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSA

Q9M3V8 40S ribosomal protein S66.0e-10980.08Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFNIANPTTGCQKKLEIDDDQKL AF                           + + V   +   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+F  K GK  SKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAAS
        PKIQRLVTPLTLQRKR RIAEKKKR+AKAK+EAAEYQKLLASRLKEQR+RRSESLAKKRSRLSAA+
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAAS

Arabidopsis top hitse value%identityAlignment
AT4G31700.1 ribosomal protein S63.4e-10776.56Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFN+ANPTTGCQKKLEIDDDQKL AF                           + + V   +   EFKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR F  K GK+VSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSIAA
        PKIQRLVTPLTLQRKR RIA+KKK+IAKA ++AA+YQKLLASRLKEQR+RRSESLAKKRSRL SAA+KPS+ A
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSIAA

AT4G31700.2 ribosomal protein S61.2e-8387.77Show/hide
Query:  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY
        MKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTY
Subjt:  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY

Query:  RRSFNTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSIAA
        RR F  K GK+VSKAPKIQRLVTPLTLQRKR RIA+KKK+IAKA ++AA+YQKLLASRLKEQR+RRSESLAKKRSRL SAA+KPS+ A
Subjt:  RRSFNTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSIAA

AT5G10360.1 Ribosomal protein S6e1.5e-10777.94Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFN+ANPTTGCQKKLEIDDDQKL AF                     F  R  L + V   +   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+F  K GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKR RIA+KKKRIAKA ++AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+A    +AA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

AT5G10360.2 Ribosomal protein S6e1.4e-7361.4Show/hide
Query:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
        MKFN+ANPTTGCQKKLEIDDDQKL AF                     F  R  L + V   +   EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL
Subjt:  MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL

Query:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA
        HRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKK                                                    GKKVSKA
Subjt:  HRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKA

Query:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA
        PKIQRLVTPLTLQRKR RIA+KKKRIAKA ++AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+A    +AA
Subjt:  PKIQRLVTPLTLQRKRGRIAEKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTGGAAATCGATGATGACCAGAAACTGTTAGCTTTCAATCCTCCTTTTCTTCAATCTGTTGTTTT
CATTCCGAATCCTTGTCTTTGTTTAGCCGTGCTTTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTCGGGGAGGTATGAATTCAAGGGCTATGTTTTCA
AGATTATGGGAGGTTGTGACAAGCAAGGATTCCCAATGAAACAGGGAGTTTTGACCCCGGGTCGTGTCCGTCTCTTGCTTCACAGAGGCACCCCTTGTTTCCGTGGTTAT
GGAAGACGTAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTGATTGTGAAGAAGGGTGACAATGATCTTCC
TGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAACTTTTCAATCTCTCAAAGGAGGATGATGTTCGCAAGTATGTTAACA
CATACCGTAGATCATTCAACACAAAAGCTGGCAAAAAGGTCAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGAGGAAGAATTGCT
GAGAAGAAAAAGAGAATTGCGAAGGCCAAGACCGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAAAGTTTGGCCAA
GAAGAGGTCCAGACTCTCCGCTGCCTCAAAGCCGTCCATTGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
CCAAAAGAGAAGGCCCATTGTTGTTTCGGATCCAATATTAAAATATTAGAGCACATATATAAATATCCATAGGCGCAGGTTTTAAAACCCTAAAGCTTAAGGCGTCGTTC
GCTCTCTTCTTTGCTCGTCTATTCTCTGCGGCCGCCTGCTACAATCTCATCGCTCGAAGATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTGGAA
ATCGATGATGACCAGAAACTGTTAGCTTTCAATCCTCCTTTTCTTCAATCTGTTGTTTTCATTCCGAATCCTTGTCTTTGTTTAGCCGTGCTTTTTTTGACAAGAGGATC
TCTCAGGAGGTCAGTGGAGATTCCCTCGGGGAGGTATGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAAGGATTCCCAATGAAACAGGGAGTTT
TGACCCCGGGTCGTGTCCGTCTCTTGCTTCACAGAGGCACCCCTTGTTTCCGTGGTTATGGAAGACGTAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTC
AGCCAAGACCTTTCTGTTCTGAATCTGGTGATTGTGAAGAAGGGTGACAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCCAAGAGGGCATC
CAAGATTCGCAAACTTTTCAATCTCTCAAAGGAGGATGATGTTCGCAAGTATGTTAACACATACCGTAGATCATTCAACACAAAAGCTGGCAAAAAGGTCAGCAAAGCTC
CCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAAAAGAGAATTGCGAAGGCCAAGACCGAGGCTGCTGAGTATCAG
AAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAAAGTTTGGCCAAGAAGAGGTCCAGACTCTCCGCTGCCTCAAAGCCGTCCATTGCTGCTTAGTT
TGTTCGCATTATTTATGTCTCAGGGTTCTGTTATCTTTATATTTTCAATCTTGTTTTGCTTTTAAAAGAATGTACTTTTTGCGGCTGCTTGCATGACATCTAGAATGTTT
TGGTATTTTTGGTTCCTAATTGACCAGTCATTTCTTGACATTACTTCATATTTTATGATAGTTGAGAGGAATTTTGAAAGAGCTTGGTAAGCTGCCTGCAGAATTAACTT
GCTTTTCAATTTTAGTGGATGTTTAGTGCATGGTTAGTCTGAATAGTTAGTTTATATTTAATAACACTAGCTTGTTTATTTTAGGTTGTATGTTTTATTAAATTATATAC
GTGTGTTCAAATCTCTGATGCTTTGTTTATTTGTTCAGATGTGTTTAATTAACAGTTCTTTGAGCTTTATGAAGTGTTTC
Protein sequenceShow/hide protein sequence
MKFNIANPTTGCQKKLEIDDDQKLLAFNPPFLQSVVFIPNPCLCLAVLFLTRGSLRRSVEIPSGRYEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGY
GRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFNTKAGKKVSKAPKIQRLVTPLTLQRKRGRIA
EKKKRIAKAKTEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA