; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G009880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G009880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:18333755..18338351
RNA-Seq ExpressionLsi08G009880
SyntenyLsi08G009880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649671.1 uncharacterized protein LOC105434653 isoform X1 [Cucumis sativus]1.2e-4656.36Show/hide
Query:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT----PRRLP-FPTTKNAENSTFHIITTCRDNMAIYSGEA-DGLPPFPPLPDTP--LPLWIAG
        M I SISSSS+ +   TI+SH       HRHGSNLN T       LP  PTTK    S     +TC  NMAIYS ++  GLP  PP  DTP   PLWIAG
Subjt:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT----PRRLP-FPTTKNAENSTFHIITTCRDNMAIYSGEA-DGLPPFPPLPDTP--LPLWIAG

Query:  VLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELS
        V+LSA+LSIWKT+NYW PFL LKEK+D+VV+  EDVAEM  +AA+ VDK AE+IA +LP+GS+LQ+ A  V+  AE+I KDAD AGD+ +K + AEDELS
Subjt:  VLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELS

Query:  TFIKQNGESKEEDDAKQEND
        + +  +GES EEDD KQ+ND
Subjt:  TFIKQNGESKEEDDAKQEND

XP_011649672.1 uncharacterized protein LOC105434653 isoform X2 [Cucumis sativus]3.6e-4856.88Show/hide
Query:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT----PRRLP-FPTTKNAENSTFHIITTCRDNMAIYSGEA-DGLPPFPPLPDTPLPLWIAGVL
        M I SISSSS+ +   TI+SH       HRHGSNLN T       LP  PTTK    S     +TC  NMAIYS ++  GLP  PP  DTP PLWIAGV+
Subjt:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT----PRRLP-FPTTKNAENSTFHIITTCRDNMAIYSGEA-DGLPPFPPLPDTPLPLWIAGVL

Query:  LSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTF
        LSA+LSIWKT+NYW PFL LKEK+D+VV+  EDVAEM  +AA+ VDK AE+IA +LP+GS+LQ+ A  V+  AE+I KDAD AGD+ +K + AEDELS+ 
Subjt:  LSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTF

Query:  IKQNGESKEEDDAKQEND
        +  +GES EEDD KQ+ND
Subjt:  IKQNGESKEEDDAKQEND

XP_038886505.1 uncharacterized protein LOC120076681 isoform X1 [Benincasa hispida]3.0e-7173.59Show/hide
Query:  MWIFSISSSSSTYLRST-IQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDN--MAIY-SGEADGLPPFPPLPDTPLPLWIAGVLLS
        M I SI SSSST+LRST IQSH      R RHGSNLNTT   LPFPTT N + S     T+CR N  MAIY SG+A+GLPP PPLPDTP PLW+AGVL+S
Subjt:  MWIFSISSSSSTYLRST-IQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDN--MAIY-SGEADGLPPFPPLPDTPLPLWIAGVLLS

Query:  AILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTFIK
        A+LSIW+T++YW PFL LKEKVD+VVDVVE+VAEMVETAAE VDKVAEEIAEHLPEGSKLQ+AALFVE +AERIAKDAD AGDIIDK+E AE+ELS+FIK
Subjt:  AILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTFIK

Query:  QNGESKEEDDAKQENDQTEARVEEQSKKATS
        QNGESKE +D+KQ+NDQTEA ++EQS+ ATS
Subjt:  QNGESKEEDDAKQENDQTEARVEEQSKKATS

XP_038886506.1 uncharacterized protein LOC120076681 isoform X2 [Benincasa hispida]1.1e-5771.94Show/hide
Query:  MWIFSISSSSSTYLRST-IQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDN--MAIY-SGEADGLPPFPPLPDTPLPLWIAGVLLS
        M I SI SSSST+LRST IQSH      R RHGSNLNTT   LPFPTT N + S     T+CR N  MAIY SG+A+GLPP PPLPDTP PLW+AGVL+S
Subjt:  MWIFSISSSSSTYLRST-IQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDN--MAIY-SGEADGLPPFPPLPDTPLPLWIAGVLLS

Query:  AILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELS
        A+LSIW+T++YW PFL LKEKVD+VVDVVE+VAEMVETAAE VDKVAEEIAEHLPEGSKLQ+AALFVE +AERIAKDAD AGDIIDK +     LS
Subjt:  AILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELS

XP_038886507.1 uncharacterized protein LOC120076681 isoform X3 [Benincasa hispida]5.0e-5873.94Show/hide
Query:  MWIFSISSSSSTYLRST-IQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDN--MAIY-SGEADGLPPFPPLPDTPLPLWIAGVLLS
        M I SI SSSST+LRST IQSH      R RHGSNLNTT   LPFPTT N + S     T+CR N  MAIY SG+A+GLPP PPLPDTP PLW+AGVL+S
Subjt:  MWIFSISSSSSTYLRST-IQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDN--MAIY-SGEADGLPPFPPLPDTPLPLWIAGVLLS

Query:  AILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKI
        A+LSIW+T++YW PFL LKEKVD+VVDVVE+VAEMVETAAE VDKVAEEIAEHLPEGSKLQ+AALFVE +AERIAKDAD AGDIIDK+
Subjt:  AILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKI

TrEMBL top hitse value%identityAlignment
A0A1S3BDR2 uncharacterized protein LOC1034885521.6e-4155.26Show/hide
Query:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNT-----TPRRLPFPTTK-NAENSTFHIITTCRDNMAIYSGEADGLPPFPPLPDTPLPLWIAGVL
        MWI SISSSS+ +   TI+SH       HR GS+LN        + L  PTTK N +NS      TC  +MAI+S ++ GLPPF P  +TP  LW+AGV+
Subjt:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNT-----TPRRLPFPTTK-NAENSTFHIITTCRDNMAIYSGEADGLPPFPPLPDTPLPLWIAGVL

Query:  LSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKI
        LSAILSIWKT+NYW PFLMLKEKVD VV+  E+ AEM ET A+ VDK AE+IAEHLP+GS LQ+ A  V+ +A++I KDAD AGD  +K+
Subjt:  LSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKI

A0A5A7VBX0 Uncharacterized protein1.6e-4155.26Show/hide
Query:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNT-----TPRRLPFPTTK-NAENSTFHIITTCRDNMAIYSGEADGLPPFPPLPDTPLPLWIAGVL
        MWI SISSSS+ +   TI+SH       HR GS+LN        + L  PTTK N +NS      TC  +MAI+S ++ GLPPF P  +TP  LW+AGV+
Subjt:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNT-----TPRRLPFPTTK-NAENSTFHIITTCRDNMAIYSGEADGLPPFPPLPDTPLPLWIAGVL

Query:  LSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKI
        LSAILSIWKT+NYW PFLMLKEKVD VV+  E+ AEM ET A+ VDK AE+IAEHLP+GS LQ+ A  V+ +A++I KDAD AGD  +K+
Subjt:  LSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKI

A0A6J1BVN6 uncharacterized protein LOC1110051384.5e-3651.56Show/hide
Query:  LRHRHGSNLNTTPRRLPFPTT----KNAENSTFHIITTCRDNMAIYSGEADGLPPFPPLP-DTPLPLWIAGVLLSAILSIWKTQNYWAPFLMLKEKVDQV
        LRH    NL+   ++LPF +T    +   +    II+  R  MAIYSGE  G P  P LP   P PLW+ G+L+SAIL  +     W PFL+L + VD+V
Subjt:  LRHRHGSNLNTTPRRLPFPTT----KNAENSTFHIITTCRDNMAIYSGEADGLPPFPPLP-DTPLPLWIAGVLLSAILSIWKTQNYWAPFLMLKEKVDQV

Query:  VDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTFIKQNGESKEEDDAKQENDQ
        VD VE+VAEMVETAAE V+KVAEE+AEHLP+G +LQ+AALF+E +A+ ++KDA  A  I+ KIEE ED++ +  K+NGE+KEE+DA+Q+ DQ
Subjt:  VDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTFIKQNGESKEEDDAKQENDQ

A0A6J1HCK6 uncharacterized protein LOC1114627545.1e-4053.74Show/hide
Query:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT-----PRRLPFPTTKNAENSTFHIITTCRDNMAIY---SGEADGLP-PFPPLPDTPLPLWIA
        M I S+SS S+  LRS + S         RHGSNLN +      + LP P T     +T   ITT RD MA+Y    G    LP P PP P TP PLW+A
Subjt:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT-----PRRLPFPTTKNAENSTFHIITTCRDNMAIY---SGEADGLP-PFPPLPDTPLPLWIA

Query:  GVLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDEL
        G +LSAILSIWKT  YW PFLMLK++V++VV V EDV +MVETAAE VDKVAEEIA+HLP+ S LQ+ A+ VE +AE +AKDA+ A DII K+E+ +D L
Subjt:  GVLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDEL

Query:  STFIKQNGESKEED
        ++ IK+ G SKE D
Subjt:  STFIKQNGESKEED

A0A6J1K717 uncharacterized protein LOC1114922231.3e-4053.92Show/hide
Query:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT-----PRRLPFPTTKNAENSTFHIITTCRDNMAIYSGEADG------LP-PFPPLPDTPLPL
        M I S+S SS++ LRST+QS         RHGSNLN +        LPFP T   +N   H ITT RD MA+Y G   G      LP P PP P TP PL
Subjt:  MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTT-----PRRLPFPTTKNAENSTFHIITTCRDNMAIYSGEADG------LP-PFPPLPDTPLPL

Query:  WIAGVLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAE
        W+AG +LSAILSIWKT  YW PFLMLK++V++VV V EDV +MVETAA+ VDKV+EEI +HLP+ S LQ+ A+ VE +AE +AKDA+ A +II K+E+ +
Subjt:  WIAGVLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAE

Query:  DELSTFIKQNGESKEED
        D LS+ IK+ G SKE D
Subjt:  DELSTFIKQNGESKEED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G14095.1 unknown protein1.6e-0935.25Show/hide
Query:  WIAGVLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAE
        W+ G  +S +LS W  +        ++ + + VV+ VE VAEMVE  A   D++AEE+AE LPE +KL+Q AL +E  +E  A +A    D + K+E+  
Subjt:  WIAGVLLSAILSIWKTQNYWAPFLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAE

Query:  ---DELSTFIKQNGESKEED-DAKQENDQTEARVEEQSK
           D+L   IK   + K  + + KQ+  + EA  E  S+
Subjt:  ---DELSTFIKQNGESKEED-DAKQENDQTEARVEEQSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGATTTTTTCAATTTCTTCCTCTTCTTCAACCTACCTTCGTTCCACCATCCAATCCCACCGCCACCGCCACCACCTTCGTCACCGCCATGGATCAAACCTTAACAC
AACTCCGAGAAGGTTGCCTTTCCCAACTACCAAAAATGCCGAAAACTCAACTTTCCATATTATCACAACTTGCAGAGATAATATGGCCATTTACAGCGGCGAAGCCGATG
GACTTCCACCTTTTCCTCCTCTCCCTGACACTCCTTTGCCATTATGGATAGCTGGGGTGCTATTGTCTGCAATTCTATCAATTTGGAAGACCCAGAACTATTGGGCGCCT
TTTCTTATGTTAAAGGAGAAAGTGGATCAAGTGGTGGATGTGGTGGAAGATGTGGCGGAAATGGTGGAGACGGCGGCGGAGACAGTGGATAAGGTGGCGGAAGAGATTGC
AGAACATCTCCCGGAAGGCAGCAAACTCCAACAGGCTGCATTATTCGTCGAAAAATCAGCGGAAAGGATTGCTAAGGATGCTGATTTTGCAGGAGATATTATTGACAAGA
TTGAGGAAGCAGAAGACGAGTTGAGTACATTTATTAAGCAAAATGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAGAGAATGATCAAACTGAAGCCCGCGTCGAGGAA
CAAAGCAAGAAGGCAACCTCTTAA
mRNA sequenceShow/hide mRNA sequence
GTCAGGTAGGTAGCTTTATATTGACATTGAAAAGTCATATATTGTGGTAATTAAAAAGGGTTGGTTTCTTCTGTAGCATTTACAATTCTCCAATCATAATAATAATAACA
ATCCATTTCCTCCAAATTTCCTTTAGAAAATGTGGATTTTTTCAATTTCTTCCTCTTCTTCAACCTACCTTCGTTCCACCATCCAATCCCACCGCCACCGCCACCACCTT
CGTCACCGCCATGGATCAAACCTTAACACAACTCCGAGAAGGTTGCCTTTCCCAACTACCAAAAATGCCGAAAACTCAACTTTCCATATTATCACAACTTGCAGAGATAA
TATGGCCATTTACAGCGGCGAAGCCGATGGACTTCCACCTTTTCCTCCTCTCCCTGACACTCCTTTGCCATTATGGATAGCTGGGGTGCTATTGTCTGCAATTCTATCAA
TTTGGAAGACCCAGAACTATTGGGCGCCTTTTCTTATGTTAAAGGAGAAAGTGGATCAAGTGGTGGATGTGGTGGAAGATGTGGCGGAAATGGTGGAGACGGCGGCGGAG
ACAGTGGATAAGGTGGCGGAAGAGATTGCAGAACATCTCCCGGAAGGCAGCAAACTCCAACAGGCTGCATTATTCGTCGAAAAATCAGCGGAAAGGATTGCTAAGGATGC
TGATTTTGCAGGAGATATTATTGACAAGATTGAGGAAGCAGAAGACGAGTTGAGTACATTTATTAAGCAAAATGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAGAGA
ATGATCAAACTGAAGCCCGCGTCGAGGAACAAAGCAAGAAGGCAACCTCTTAATTAAATGATATAAAATATAGGGTTGAACTTGAATTATATAATGATGTATCAATTCAT
TTGGAACATACATTCATTTGTGTGCATAATAACTTTAATGGAGCCTACTTGCCAATCTTAACGATAAATTCCTAGATGAACCGCACCTATTGCCACTCTGAAGGGTCCTA
GACCCCATAATTCAAAACTTACGTTTAGATTGAACATTTTGGGTCTGATTTGTAATATTAAACTCATTCCATTCAAACAGTTTTTAACTAAATTCTTTCACGCATTCC
Protein sequenceShow/hide protein sequence
MWIFSISSSSSTYLRSTIQSHRHRHHLRHRHGSNLNTTPRRLPFPTTKNAENSTFHIITTCRDNMAIYSGEADGLPPFPPLPDTPLPLWIAGVLLSAILSIWKTQNYWAP
FLMLKEKVDQVVDVVEDVAEMVETAAETVDKVAEEIAEHLPEGSKLQQAALFVEKSAERIAKDADFAGDIIDKIEEAEDELSTFIKQNGESKEEDDAKQENDQTEARVEE
QSKKATS