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Lsi08G010050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G010050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:18545870..18560771
RNA-Seq ExpressionLsi08G010050
SyntenyLsi08G010050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152611.1 uncharacterized protein LOC101216451 [Cucumis sativus]1.8e-4073.81Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVIL---PPPPPPPRRRPLPLDDKLRRTRSE
        FR++  RYCSNLYPKADCYRICNWCL+  +ESNPKSPNSSSSI       Q P F+SQLNKPIKKQ S  +++   PPPPPPPRRR + +D+KLRRTRSE
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVIL---PPPPPPPRRRPLPLDDKLRRTRSE

Query:  EISHRTGIKRPVVFRNKVRRYKLLDE
        EISHRTGIKRPV+FRNKVRRYKLLDE
Subjt:  EISHRTGIKRPVVFRNKVRRYKLLDE

XP_008444888.1 PREDICTED: uncharacterized protein LOC103488103 [Cucumis melo]4.6e-4174.22Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTH-QIPTFQSQLNKPIKKQRSPEVIL----PPPPPPPRRRPLPLDDKLRRTR
        FR++  RYCSNLYPKADCYRICNWCL+Q +ESNPKSPNSSSS  P I  + Q P F+S+LNKPIKKQ S  +++    PPPPPPPRRR + +DDKLRRTR
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTH-QIPTFQSQLNKPIKKQRSPEVIL----PPPPPPPRRRPLPLDDKLRRTR

Query:  SEEISHRTGIKRPVVFRNKVRRYKLLDE
        SEEISHRTGIKRPV+FRNKVRRYKLLDE
Subjt:  SEEISHRTGIKRPVVFRNKVRRYKLLDE

XP_022132041.1 uncharacterized protein LOC111005007 [Momordica charantia]1.5e-3969.29Show/hide
Query:  RYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------------SSIKPQITTH--QIPTFQSQLNKPIKKQRSPEVILPPPPPPP----RRR
        RYCSNLYPKA+CYRICNWCLSQKEES  KSPNSS                 SSIK    ++  QI TFQSQ N+PIKKQRSPEV+ PPPPPPP    RRR
Subjt:  RYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------------SSIKPQITTH--QIPTFQSQLNKPIKKQRSPEVILPPPPPPP----RRR

Query:  PLPLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE
        P+ +DD LRRTRSEEISHRTGI+RPV+FRNKVRRYKLLDE
Subjt:  PLPLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE

XP_022951049.1 uncharacterized protein LOC111454013 [Cucurbita moschata]6.9e-3766.42Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------SSIKPQITTHQIPTFQSQLNKPIKKQRSPEVI---LPPPPPPPRRRPLP
        FR++  RYCSNLYPKADCYRICNWCL+QKEES  KSPNSS           SSIK      QI TF     +PIKKQRSPE      PPPPPPPRR+P+ 
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------SSIKPQITTHQIPTFQSQLNKPIKKQRSPEVI---LPPPPPPPRRRPLP

Query:  LDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE
        ++D LRRTRSEEISHR+GI+RPV+FRNKVRRYKLLDE
Subjt:  LDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE

XP_038884359.1 uncharacterized protein LOC120075221 [Benincasa hispida]2.5e-5592.68Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVILPPPPPPPRRRPLPLDDKLRRTRSEEIS
        FR++  RYCSNLYPKADCYRICNWCL QKEESNPKSPNSSSS KPQITTHQIPTFQSQLNK IKKQ SPEVILPPPPPPPRRRPLPLDDKLRRTRSEEIS
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVILPPPPPPPRRRPLPLDDKLRRTRSEEIS

Query:  HRTGIKRPVVFRNKVRRYKLLDE
        HRTGIKRPV+FRNKVRRYKLLDE
Subjt:  HRTGIKRPVVFRNKVRRYKLLDE

TrEMBL top hitse value%identityAlignment
A0A0A0LLR8 Uncharacterized protein8.5e-4173.81Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVIL---PPPPPPPRRRPLPLDDKLRRTRSE
        FR++  RYCSNLYPKADCYRICNWCL+  +ESNPKSPNSSSSI       Q P F+SQLNKPIKKQ S  +++   PPPPPPPRRR + +D+KLRRTRSE
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVIL---PPPPPPPRRRPLPLDDKLRRTRSE

Query:  EISHRTGIKRPVVFRNKVRRYKLLDE
        EISHRTGIKRPV+FRNKVRRYKLLDE
Subjt:  EISHRTGIKRPVVFRNKVRRYKLLDE

A0A1S3BCA2 uncharacterized protein LOC1034881032.2e-4174.22Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTH-QIPTFQSQLNKPIKKQRSPEVIL----PPPPPPPRRRPLPLDDKLRRTR
        FR++  RYCSNLYPKADCYRICNWCL+Q +ESNPKSPNSSSS  P I  + Q P F+S+LNKPIKKQ S  +++    PPPPPPPRRR + +DDKLRRTR
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSSSSIKPQITTH-QIPTFQSQLNKPIKKQRSPEVIL----PPPPPPPRRRPLPLDDKLRRTR

Query:  SEEISHRTGIKRPVVFRNKVRRYKLLDE
        SEEISHRTGIKRPV+FRNKVRRYKLLDE
Subjt:  SEEISHRTGIKRPVVFRNKVRRYKLLDE

A0A6J1BR47 uncharacterized protein LOC1110050077.2e-4069.29Show/hide
Query:  RYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------------SSIKPQITTH--QIPTFQSQLNKPIKKQRSPEVILPPPPPPP----RRR
        RYCSNLYPKA+CYRICNWCLSQKEES  KSPNSS                 SSIK    ++  QI TFQSQ N+PIKKQRSPEV+ PPPPPPP    RRR
Subjt:  RYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------------SSIKPQITTH--QIPTFQSQLNKPIKKQRSPEVILPPPPPPP----RRR

Query:  PLPLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE
        P+ +DD LRRTRSEEISHRTGI+RPV+FRNKVRRYKLLDE
Subjt:  PLPLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE

A0A6J1GHL7 uncharacterized protein LOC1114540133.3e-3766.42Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------SSIKPQITTHQIPTFQSQLNKPIKKQRSPEVI---LPPPPPPPRRRPLP
        FR++  RYCSNLYPKADCYRICNWCL+QKEES  KSPNSS           SSIK      QI TF     +PIKKQRSPE      PPPPPPPRR+P+ 
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------SSIKPQITTHQIPTFQSQLNKPIKKQRSPEVI---LPPPPPPPRRRPLP

Query:  LDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE
        ++D LRRTRSEEISHR+GI+RPV+FRNKVRRYKLLDE
Subjt:  LDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE

A0A6J1KQ08 uncharacterized protein LOC1114965641.7e-3665.22Show/hide
Query:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------SSIKPQITTHQIPTFQSQLNKPIKKQRSPEVI----LPPPPPPPRRRPL
        FR++  RYCSNLYPKADCYRICNWCL+QKEES  KSPNSS           SSIK      QI TF     +PIKKQRSPE       PPPPPPPRR+P+
Subjt:  FRNKVRRYCSNLYPKADCYRICNWCLSQKEESNPKSPNSS-----------SSIKPQITTHQIPTFQSQLNKPIKKQRSPEVI----LPPPPPPPRRRPL

Query:  PLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE
         +++ LRRTRSEEISHR+GI+RPV+FRNKVRRYKLLDE
Subjt:  PLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTGGAAGAATCTAACCCCAAATCACCAAATTCTTCTTCCTCTATTAAACCACAAATCACCACACACCAAATTCCCACTTTTCAATCTCAACTGAACAAACCCAT
CAAAAAACAGAGGTCCCCTGAAGTAATTCTGCCCCCTCCGCCGCCTCCCCCTCGCCGGAGACCCCTCCCCCTCGACGATAAACTCCGGCGGACTAGATCGGAAGAGATTT
CCCACCGGACTGGGATCAAGCGGCCGGTTGTCTTTAGGAATAAGGTCAGAAGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTATCGAATATGCAATTGGTGTTTA
AGTCAAAAGGAAGAATCTAACCCCAAATCACCAAATTCTTCTTCCTCTATTAAACCACAAATCACCACACACCAAATTCCCACTTTTCAATCTCAACTGAACAAACCCAT
CAAAAAACAGAGGTCCCCTGAAGTAATTCTGCCCCCTCCGCCGCCTCCCCCTCGCCGGAGACCCCTCCCCCTCGACGATAAACTCCGGCGGACTAGATCGGAAGAGATTT
CCCACCGGACTGGGATCAAGCGGCCGGTTGTCTTTAGGAATAAGGTCAGAAGGTACAAACTTCTGGACGAGGATTACCAAATATTAATGAAATGGAAATTAAAGAGGAAA
ATAAAGAGAAGTGGAATCCAAATAAGTTGTTGGATTATTTGCAACACATGTGGAGTTGGAGTTTTGAACCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTGGAAGAATCTAACCCCAAATCACCAAATTCTTCTTCCTCTATTAAACCACAAATCACCACACACCAAATTCCCACTTTTCAATCTCAACTGAACAAACCCAT
CAAAAAACAGAGGTCCCCTGAAGTAATTCTGCCCCCTCCGCCGCCTCCCCCTCGCCGGAGACCCCTCCCCCTCGACGATAAACTCCGGCGGACTAGATCGGAAGAGATTT
CCCACCGGACTGGGATCAAGCGGCCGGTTGTCTTTAGGAATAAGGTCAGAAGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTATCGAATATGCAATTGGTGTTTA
AGTCAAAAGGAAGAATCTAACCCCAAATCACCAAATTCTTCTTCCTCTATTAAACCACAAATCACCACACACCAAATTCCCACTTTTCAATCTCAACTGAACAAACCCAT
CAAAAAACAGAGGTCCCCTGAAGTAATTCTGCCCCCTCCGCCGCCTCCCCCTCGCCGGAGACCCCTCCCCCTCGACGATAAACTCCGGCGGACTAGATCGGAAGAGATTT
CCCACCGGACTGGGATCAAGCGGCCGGTTGTCTTTAGGAATAAGGTCAGAAGGTACAAACTTCTGGACGAGGATTACCAAATATTAATGAAATGGAAATTAAAGAGGAAA
ATAAAGAGAAGTGGAATCCAAATAAGTTGTTGGATTATTTGCAACACATGTGGAGTTGGAGTTTTGAACCTTTAA
Protein sequenceShow/hide protein sequence
MQLEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVILPPPPPPPRRRPLPLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYCSNLYPKADCYRICNWCL
SQKEESNPKSPNSSSSIKPQITTHQIPTFQSQLNKPIKKQRSPEVILPPPPPPPRRRPLPLDDKLRRTRSEEISHRTGIKRPVVFRNKVRRYKLLDEDYQILMKWKLKRK
IKRSGIQISCWIICNTCGVGVLNL