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Lsi08G010100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G010100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr08:18641925..18643265
RNA-Seq ExpressionLsi08G010100
SyntenyLsi08G010100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065108.1 hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa]1.4e-2478.95Show/hide
Query:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDE R A+STPPQDDGA AFSGRKQEASVMDRVKKG TSF ASSQETL Y        GKK+TA+SEKEAAEADLKTAKMQVQATE AEN K GT
Subjt:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

XP_008444894.1 PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo]3.1e-2477.89Show/hide
Query:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDE R A+STPPQDDGA AFSGRKQEASVMDRVKKG TSF ASSQETL Y        GKK+TA+SEKEAAEADL+TAKMQVQATE AEN K GT
Subjt:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

XP_023001883.1 uncharacterized protein LOC111495934 [Cucurbita maxima]7.6e-2374.47Show/hide
Query:  MDEIRASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDEIRAS+ P QDDGAG FSG K+EASVMDRVKKG  +  ASSQE LRY        GKKMTA+SEKEAAEADLK AKMQV+ATE AENTKKGT
Subjt:  MDEIRASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

XP_023537005.1 uncharacterized protein LOC111798221 [Cucurbita pepo subsp. pepo]8.4e-2271.88Show/hide
Query:  MDEIRASS--TPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDEIRAS+   PPQD+GAG FSG K+EASVMDRVKKG T+  ASSQE +RY        GKKM ARSEKEAAEADLK AKMQV+ATE AEN KKGT
Subjt:  MDEIRASS--TPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

XP_038886259.1 uncharacterized protein LOC120076486 [Benincasa hispida]1.1e-2983.87Show/hide
Query:  MDEIRASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKG
        MDEIRASSTPPQDDGAG FSGRKQEASVMD VKKGW  FCASSQETLRY        GKKMTA+SEKEAAEADLKTAKMQVQATE AENTK+G
Subjt:  MDEIRASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKG

TrEMBL top hitse value%identityAlignment
A0A1S3BC67 uncharacterized protein LOC1034881091.5e-2477.89Show/hide
Query:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDE R A+STPPQDDGA AFSGRKQEASVMDRVKKG TSF ASSQETL Y        GKK+TA+SEKEAAEADL+TAKMQVQATE AEN K GT
Subjt:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

A0A5A7VBV2 Uncharacterized protein6.7e-2578.95Show/hide
Query:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDE R A+STPPQDDGA AFSGRKQEASVMDRVKKG TSF ASSQETL Y        GKK+TA+SEKEAAEADLKTAKMQVQATE AEN K GT
Subjt:  MDEIR-ASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

A0A6J1BRY6 uncharacterized protein LOC1110050101.6e-1071.43Show/hide
Query:  MDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTK
        MDR+K G  SF ASSQETLRY        GKKMTA++E+EAA+ADLKTAKMQVQATE AENTK
Subjt:  MDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTK

A0A6J1GHI8 uncharacterized protein LOC1114540149.0e-2270.41Show/hide
Query:  MDEIRASS----TPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDEIRAS+     PPQD+GAG FSG K+EASVMDRVKKG  +  ASSQE LRY        GKKMTA+SEKEAAEADLK AKMQV+ATE AEN KKGT
Subjt:  MDEIRASS----TPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

A0A6J1KRV8 uncharacterized protein LOC1114959343.7e-2374.47Show/hide
Query:  MDEIRASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT
        MDEIRAS+ P QDDGAG FSG K+EASVMDRVKKG  +  ASSQE LRY        GKKMTA+SEKEAAEADLK AKMQV+ATE AENTKKGT
Subjt:  MDEIRASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38465.1 unknown protein1.2e-0542.67Show/hide
Query:  AFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKK
        A + R+   S+ DRVK    S   + QE   Y         K++TA++EKEA EA L   KMQV AT++AEN KK
Subjt:  AFSGRKQEASVMDRVKKGWTSFCASSQETLRY--------GKKMTARSEKEAAEADLKTAKMQVQATEDAENTKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGAGCAGGGGCGTTTTCCGGCCGGAAACAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGGTGGAC
GTCCTTTTGTGCGTCTTCTCAAGAGACGCTGCGATATGGAAAGAAGATGACAGCAAGGAGCGAGAAGGAAGCGGCAGAAGCAGATTTAAAGACTGCCAAAATGCAGGTTC
AAGCTACTGAGGACGCAGAGAACACCAAGAAAGGAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGAGCAGGGGCGTTTTCCGGCCGGAAACAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGGTGGAC
GTCCTTTTGTGCGTCTTCTCAAGAGACGCTGCGATATGGAAAGAAGATGACAGCAAGGAGCGAGAAGGAAGCGGCAGAAGCAGATTTAAAGACTGCCAAAATGCAGGTTC
AAGCTACTGAGGACGCAGAGAACACCAAGAAAGGAACTTAA
Protein sequenceShow/hide protein sequence
MDEIRASSTPPQDDGAGAFSGRKQEASVMDRVKKGWTSFCASSQETLRYGKKMTARSEKEAAEADLKTAKMQVQATEDAENTKKGT