; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi08G010140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi08G010140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGATA transcription factor 24-like isoform X1
Genome locationchr08:18723608..18728309
RNA-Seq ExpressionLsi08G010140
SyntenyLsi08G010140
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444908.1 PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo]1.2e-4094.68Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKP IMEG+FSGIQDEHGTPEDPSKTMTEGSSNPSID DEED NETTGDLTNSLPMRIVNHS+NDDEQEPLVELANPSDTDIDIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

XP_011649687.1 GATA transcription factor 24 isoform X1 [Cucumis sativus]3.5e-4093.62Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKP IMEG+FSGIQDEHGTPEDPSKTMTEGSSNPSID DEED NETTG+LTNSLPMRIVNHS+NDDEQEPLVELANPSDTDIDIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

XP_022131842.1 GATA transcription factor 24-like [Momordica charantia]5.9e-4090.43Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMD+KPTIMEG+FSGIQDEHGTPEDP KTMTEGSSNPSIDPDEED N+TTGDLTNSLP+RIVNHS N DEQEPLVELANPSDTD+DIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

XP_023546303.1 GATA transcription factor 19-like isoform X1 [Cucurbita pepo subsp. pepo]9.4e-3888.3Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKPTIMEG+FSGIQDEHGTPEDP KTMTEGSSNPS+DP EED NETT +LTNSLPM+I NHSTN DEQEPL+ELANPSDTDIDIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

XP_038884827.1 GATA transcription factor 19-like isoform X1 [Benincasa hispida]2.4e-4195.83Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSI--DPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKPTIMEG+FSGIQDEHGTPEDPSKTMTEGSSNPSI  DPDEED NETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSI--DPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

TrEMBL top hitse value%identityAlignment
A0A0A0LLS6 Uncharacterized protein1.7e-4093.62Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKP IMEG+FSGIQDEHGTPEDPSKTMTEGSSNPSID DEED NETTG+LTNSLPMRIVNHS+NDDEQEPLVELANPSDTDIDIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

A0A1S3BAZ6 GATA transcription factor 24-like isoform X15.8e-4194.68Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKP IMEG+FSGIQDEHGTPEDPSKTMTEGSSNPSID DEED NETTGDLTNSLPMRIVNHS+NDDEQEPLVELANPSDTDIDIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

A0A6J1BUL9 GATA transcription factor 24-like2.9e-4090.43Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMD+KPTIMEG+FSGIQDEHGTPEDP KTMTEGSSNPSIDPDEED N+TTGDLTNSLP+RIVNHS N DEQEPLVELANPSDTD+DIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

A0A6J1HDR0 GATA transcription factor 19-like isoform X18.6e-3786.17Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKPTIMEG+FSGIQDEHGTPEDP KTMTEGSS+PS+DP EED NETT +LTNSLP +I NHSTN DEQEPL+ELANPSDTDIDIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

A0A6J1K6T3 GATA transcription factor 24-like isoform X16.0e-3887.23Show/hide
Query:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD
        ETPMDVKPTIMEG+FSGIQDEHGTPEDP KTMTEGSSNPS+DP EED NETT +LTNSLPM+I NHSTN DEQEPL+ELANPSDTD+DIPTNFD
Subjt:  ETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTACGTTATGATTCATGGAAAGCTTATATGCTTTTATTTCATGTTGATATATTGAGATACATTGTTTTTCCAATGACTTCAATGGCTTTGCAGGAAACCCCAAT
GGATGTCAAGCCCACAATCATGGAGGGAAAATTTTCGGGCATCCAGGATGAACATGGAACTCCTGAGGATCCTAGTAAAACCATGACTGAAGGCTCCAGTAATCCTTCCA
TTGACCCGGATGAGGAAGACACAAATGAAACCACTGGAGACCTTACAAATTCGTTGCCCATGCGAATCGTCAATCATTCAACAAATGATGATGAGCAGGAACCTCTTGTC
GAACTTGCTAATCCTTCGGATACCGATATAGACATCCCCACTAACTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGTACGTTATGATTCATGGAAAGCTTATATGCTTTTATTTCATGTTGATATATTGAGATACATTGTTTTTCCAATGACTTCAATGGCTTTGCAGGAAACCCCAAT
GGATGTCAAGCCCACAATCATGGAGGGAAAATTTTCGGGCATCCAGGATGAACATGGAACTCCTGAGGATCCTAGTAAAACCATGACTGAAGGCTCCAGTAATCCTTCCA
TTGACCCGGATGAGGAAGACACAAATGAAACCACTGGAGACCTTACAAATTCGTTGCCCATGCGAATCGTCAATCATTCAACAAATGATGATGAGCAGGAACCTCTTGTC
GAACTTGCTAATCCTTCGGATACCGATATAGACATCCCCACTAACTTTGATTAGAAGATGTCAAAAGTTACTATCAACAATGGAGTGGCAGTTAGGACTTGTATAATTAC
AAAAAATGTCCAATGACATAAGGTTCAAGTGTGCAGTGGTCATCTTTTGGCCGGGACGTTGCACGCTGGTCTCAGCTGACGTTAGATCTTCTAACGATGTTGATATTGCT
TCCAGAAACTGTTTGTATTCAGAGTACGAGTCGAGTTGTTAGGGGATACAGTTGAGTTCTTCCATCAGTGTATGATCTGAGTGATTCATTTGGTAGGGTTACTCTTGATT
CAATTTTATTGGAAGGTCTGCTTCCATAATTTATCGTCATAATGATGAAGGGATCAAATTGTACGTGTTTGTATCTTAAGATAGACATTTGTTTTGCTTCTAATTGACAA
GATATACACAATGACTTGAGCAATTGCTAATAGAATAAACTTGCACATTAAGAGCCCTGTAATTTTAGTGATGGCCCCTTCCCTGTAATTTTGAGTTTGTACTGTTCGGT
TTGGTCTGGTCATGTATATAAATAAATTGAGAGCAAAATTTACCATAC
Protein sequenceShow/hide protein sequence
MDVRYDSWKAYMLLFHVDILRYIVFPMTSMALQETPMDVKPTIMEGKFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDEEDTNETTGDLTNSLPMRIVNHSTNDDEQEPLV
ELANPSDTDIDIPTNFD